data_7K6G # _model_server_result.job_id JC4Z74WZFx8UsDqmUF9K5Q _model_server_result.datetime_utc '2024-11-23 02:58:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k6g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":204}' # _entry.id 7K6G # _exptl.entry_id 7K6G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7K6G _cell.length_a 42.24 _cell.length_b 59.63 _cell.length_c 123.51 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K6G _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,J 1 1 B,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 I N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7K6G _atom_sites.fract_transf_matrix[1][1] 0.023674 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01677 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008097 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VYJ A 1 201 2 VYJ LIG . D 2 VYJ A 1 202 3 VYJ LIG . E 2 VYJ A 1 203 4 VYJ LIG . F 3 EDO A 1 204 1 EDO EDO . G 3 EDO A 1 205 3 EDO EDO . H 2 VYJ B 1 201 1 VYJ LIG . I 3 EDO B 1 202 5 EDO EDO . J 4 HOH A 1 301 323 HOH HOH . J 4 HOH A 2 302 329 HOH HOH . J 4 HOH A 3 303 140 HOH HOH . J 4 HOH A 4 304 247 HOH HOH . J 4 HOH A 5 305 179 HOH HOH . J 4 HOH A 6 306 316 HOH HOH . J 4 HOH A 7 307 115 HOH HOH . J 4 HOH A 8 308 65 HOH HOH . J 4 HOH A 9 309 188 HOH HOH . J 4 HOH A 10 310 8 HOH HOH . J 4 HOH A 11 311 226 HOH HOH . J 4 HOH A 12 312 187 HOH HOH . J 4 HOH A 13 313 176 HOH HOH . J 4 HOH A 14 314 306 HOH HOH . J 4 HOH A 15 315 144 HOH HOH . J 4 HOH A 16 316 118 HOH HOH . J 4 HOH A 17 317 214 HOH HOH . J 4 HOH A 18 318 151 HOH HOH . J 4 HOH A 19 319 57 HOH HOH . J 4 HOH A 20 320 96 HOH HOH . J 4 HOH A 21 321 312 HOH HOH . J 4 HOH A 22 322 281 HOH HOH . J 4 HOH A 23 323 215 HOH HOH . J 4 HOH A 24 324 111 HOH HOH . J 4 HOH A 25 325 234 HOH HOH . J 4 HOH A 26 326 295 HOH HOH . J 4 HOH A 27 327 19 HOH HOH . J 4 HOH A 28 328 72 HOH HOH . J 4 HOH A 29 329 266 HOH HOH . J 4 HOH A 30 330 315 HOH HOH . J 4 HOH A 31 331 235 HOH HOH . J 4 HOH A 32 332 9 HOH HOH . J 4 HOH A 33 333 11 HOH HOH . J 4 HOH A 34 334 28 HOH HOH . J 4 HOH A 35 335 186 HOH HOH . J 4 HOH A 36 336 63 HOH HOH . J 4 HOH A 37 337 107 HOH HOH . J 4 HOH A 38 338 59 HOH HOH . J 4 HOH A 39 339 31 HOH HOH . J 4 HOH A 40 340 130 HOH HOH . J 4 HOH A 41 341 181 HOH HOH . J 4 HOH A 42 342 93 HOH HOH . J 4 HOH A 43 343 35 HOH HOH . J 4 HOH A 44 344 224 HOH HOH . J 4 HOH A 45 345 123 HOH HOH . J 4 HOH A 46 346 292 HOH HOH . J 4 HOH A 47 347 249 HOH HOH . J 4 HOH A 48 348 162 HOH HOH . J 4 HOH A 49 349 136 HOH HOH . J 4 HOH A 50 350 10 HOH HOH . J 4 HOH A 51 351 133 HOH HOH . J 4 HOH A 52 352 56 HOH HOH . J 4 HOH A 53 353 280 HOH HOH . J 4 HOH A 54 354 139 HOH HOH . J 4 HOH A 55 355 104 HOH HOH . J 4 HOH A 56 356 228 HOH HOH . J 4 HOH A 57 357 25 HOH HOH . J 4 HOH A 58 358 114 HOH HOH . J 4 HOH A 59 359 244 HOH HOH . J 4 HOH A 60 360 23 HOH HOH . J 4 HOH A 61 361 283 HOH HOH . J 4 HOH A 62 362 42 HOH HOH . J 4 HOH A 63 363 79 HOH HOH . J 4 HOH A 64 364 74 HOH HOH . J 4 HOH A 65 365 17 HOH HOH . J 4 HOH A 66 366 330 HOH HOH . J 4 HOH A 67 367 152 HOH HOH . J 4 HOH A 68 368 36 HOH HOH . J 4 HOH A 69 369 233 HOH HOH . J 4 HOH A 70 370 98 HOH HOH . J 4 HOH A 71 371 160 HOH HOH . J 4 HOH A 72 372 255 HOH HOH . J 4 HOH A 73 373 7 HOH HOH . J 4 HOH A 74 374 153 HOH HOH . J 4 HOH A 75 375 287 HOH HOH . J 4 HOH A 76 376 119 HOH HOH . J 4 HOH A 77 377 145 HOH HOH . J 4 HOH A 78 378 6 HOH HOH . J 4 HOH A 79 379 117 HOH HOH . J 4 HOH A 80 380 99 HOH HOH . J 4 HOH A 81 381 120 HOH HOH . J 4 HOH A 82 382 46 HOH HOH . J 4 HOH A 83 383 219 HOH HOH . J 4 HOH A 84 384 43 HOH HOH . J 4 HOH A 85 385 197 HOH HOH . J 4 HOH A 86 386 16 HOH HOH . J 4 HOH A 87 387 37 HOH HOH . J 4 HOH A 88 388 238 HOH HOH . J 4 HOH A 89 389 66 HOH HOH . J 4 HOH A 90 390 75 HOH HOH . J 4 HOH A 91 391 58 HOH HOH . J 4 HOH A 92 392 189 HOH HOH . J 4 HOH A 93 393 129 HOH HOH . J 4 HOH A 94 394 270 HOH HOH . J 4 HOH A 95 395 155 HOH HOH . J 4 HOH A 96 396 326 HOH HOH . J 4 HOH A 97 397 137 HOH HOH . J 4 HOH A 98 398 92 HOH HOH . J 4 HOH A 99 399 267 HOH HOH . J 4 HOH A 100 400 268 HOH HOH . J 4 HOH A 101 401 170 HOH HOH . J 4 HOH A 102 402 61 HOH HOH . J 4 HOH A 103 403 325 HOH HOH . J 4 HOH A 104 404 250 HOH HOH . J 4 HOH A 105 405 192 HOH HOH . J 4 HOH A 106 406 201 HOH HOH . J 4 HOH A 107 407 256 HOH HOH . J 4 HOH A 108 408 68 HOH HOH . J 4 HOH A 109 409 237 HOH HOH . J 4 HOH A 110 410 271 HOH HOH . J 4 HOH A 111 411 331 HOH HOH . J 4 HOH A 112 412 105 HOH HOH . J 4 HOH A 113 413 168 HOH HOH . J 4 HOH A 114 414 284 HOH HOH . J 4 HOH A 115 415 159 HOH HOH . J 4 HOH A 116 416 258 HOH HOH . J 4 HOH A 117 417 269 HOH HOH . J 4 HOH A 118 418 206 HOH HOH . J 4 HOH A 119 419 285 HOH HOH . J 4 HOH A 120 420 239 HOH HOH . J 4 HOH A 121 421 278 HOH HOH . J 4 HOH A 122 422 327 HOH HOH . J 4 HOH A 123 423 246 HOH HOH . J 4 HOH A 124 424 286 HOH HOH . J 4 HOH A 125 425 261 HOH HOH . J 4 HOH A 126 426 210 HOH HOH . J 4 HOH A 127 427 299 HOH HOH . J 4 HOH A 128 428 26 HOH HOH . J 4 HOH A 129 429 279 HOH HOH . J 4 HOH A 130 430 208 HOH HOH . J 4 HOH A 131 431 304 HOH HOH . J 4 HOH A 132 432 142 HOH HOH . J 4 HOH A 133 433 251 HOH HOH . J 4 HOH A 134 434 205 HOH HOH . J 4 HOH A 135 435 180 HOH HOH . J 4 HOH A 136 436 300 HOH HOH . J 4 HOH A 137 437 103 HOH HOH . J 4 HOH A 138 438 200 HOH HOH . J 4 HOH A 139 439 157 HOH HOH . J 4 HOH A 140 440 178 HOH HOH . J 4 HOH A 141 441 185 HOH HOH . J 4 HOH A 142 442 183 HOH HOH . J 4 HOH A 143 443 44 HOH HOH . J 4 HOH A 144 444 265 HOH HOH . J 4 HOH A 145 445 229 HOH HOH . J 4 HOH A 146 446 125 HOH HOH . J 4 HOH A 147 447 262 HOH HOH . J 4 HOH A 148 448 231 HOH HOH . J 4 HOH A 149 449 108 HOH HOH . J 4 HOH A 150 450 253 HOH HOH . J 4 HOH A 151 451 106 HOH HOH . J 4 HOH A 152 452 88 HOH HOH . J 4 HOH A 153 453 195 HOH HOH . J 4 HOH A 154 454 222 HOH HOH . J 4 HOH A 155 455 173 HOH HOH . J 4 HOH A 156 456 309 HOH HOH . J 4 HOH A 157 457 64 HOH HOH . J 4 HOH A 158 458 245 HOH HOH . J 4 HOH A 159 459 163 HOH HOH . J 4 HOH A 160 460 291 HOH HOH . J 4 HOH A 161 461 80 HOH HOH . J 4 HOH A 162 462 232 HOH HOH . J 4 HOH A 163 463 289 HOH HOH . K 4 HOH B 1 301 73 HOH HOH . K 4 HOH B 2 302 116 HOH HOH . K 4 HOH B 3 303 212 HOH HOH . K 4 HOH B 4 304 242 HOH HOH . K 4 HOH B 5 305 62 HOH HOH . K 4 HOH B 6 306 146 HOH HOH . K 4 HOH B 7 307 274 HOH HOH . K 4 HOH B 8 308 132 HOH HOH . K 4 HOH B 9 309 48 HOH HOH . K 4 HOH B 10 310 213 HOH HOH . K 4 HOH B 11 311 156 HOH HOH . K 4 HOH B 12 312 264 HOH HOH . K 4 HOH B 13 313 171 HOH HOH . K 4 HOH B 14 314 184 HOH HOH . K 4 HOH B 15 315 121 HOH HOH . K 4 HOH B 16 316 50 HOH HOH . K 4 HOH B 17 317 95 HOH HOH . K 4 HOH B 18 318 38 HOH HOH . K 4 HOH B 19 319 230 HOH HOH . K 4 HOH B 20 320 131 HOH HOH . K 4 HOH B 21 321 198 HOH HOH . K 4 HOH B 22 322 41 HOH HOH . K 4 HOH B 23 323 322 HOH HOH . K 4 HOH B 24 324 143 HOH HOH . K 4 HOH B 25 325 70 HOH HOH . K 4 HOH B 26 326 4 HOH HOH . K 4 HOH B 27 327 18 HOH HOH . K 4 HOH B 28 328 167 HOH HOH . K 4 HOH B 29 329 53 HOH HOH . K 4 HOH B 30 330 52 HOH HOH . K 4 HOH B 31 331 154 HOH HOH . K 4 HOH B 32 332 15 HOH HOH . K 4 HOH B 33 333 161 HOH HOH . K 4 HOH B 34 334 71 HOH HOH . K 4 HOH B 35 335 39 HOH HOH . K 4 HOH B 36 336 67 HOH HOH . K 4 HOH B 37 337 282 HOH HOH . K 4 HOH B 38 338 288 HOH HOH . K 4 HOH B 39 339 45 HOH HOH . K 4 HOH B 40 340 135 HOH HOH . K 4 HOH B 41 341 55 HOH HOH . K 4 HOH B 42 342 83 HOH HOH . K 4 HOH B 43 343 307 HOH HOH . K 4 HOH B 44 344 97 HOH HOH . K 4 HOH B 45 345 3 HOH HOH . K 4 HOH B 46 346 100 HOH HOH . K 4 HOH B 47 347 89 HOH HOH . K 4 HOH B 48 348 14 HOH HOH . K 4 HOH B 49 349 29 HOH HOH . K 4 HOH B 50 350 90 HOH HOH . K 4 HOH B 51 351 164 HOH HOH . K 4 HOH B 52 352 21 HOH HOH . K 4 HOH B 53 353 290 HOH HOH . K 4 HOH B 54 354 318 HOH HOH . K 4 HOH B 55 355 305 HOH HOH . K 4 HOH B 56 356 126 HOH HOH . K 4 HOH B 57 357 172 HOH HOH . K 4 HOH B 58 358 51 HOH HOH . K 4 HOH B 59 359 217 HOH HOH . K 4 HOH B 60 360 60 HOH HOH . K 4 HOH B 61 361 127 HOH HOH . K 4 HOH B 62 362 277 HOH HOH . K 4 HOH B 63 363 174 HOH HOH . K 4 HOH B 64 364 27 HOH HOH . K 4 HOH B 65 365 5 HOH HOH . K 4 HOH B 66 366 22 HOH HOH . K 4 HOH B 67 367 204 HOH HOH . K 4 HOH B 68 368 209 HOH HOH . K 4 HOH B 69 369 124 HOH HOH . K 4 HOH B 70 370 12 HOH HOH . K 4 HOH B 71 371 122 HOH HOH . K 4 HOH B 72 372 112 HOH HOH . K 4 HOH B 73 373 276 HOH HOH . K 4 HOH B 74 374 2 HOH HOH . K 4 HOH B 75 375 91 HOH HOH . K 4 HOH B 76 376 128 HOH HOH . K 4 HOH B 77 377 24 HOH HOH . K 4 HOH B 78 378 225 HOH HOH . K 4 HOH B 79 379 1 HOH HOH . K 4 HOH B 80 380 216 HOH HOH . K 4 HOH B 81 381 13 HOH HOH . K 4 HOH B 82 382 207 HOH HOH . K 4 HOH B 83 383 203 HOH HOH . K 4 HOH B 84 384 302 HOH HOH . K 4 HOH B 85 385 49 HOH HOH . K 4 HOH B 86 386 47 HOH HOH . K 4 HOH B 87 387 148 HOH HOH . K 4 HOH B 88 388 40 HOH HOH . K 4 HOH B 89 389 69 HOH HOH . K 4 HOH B 90 390 20 HOH HOH . K 4 HOH B 91 391 110 HOH HOH . K 4 HOH B 92 392 202 HOH HOH . K 4 HOH B 93 393 102 HOH HOH . K 4 HOH B 94 394 199 HOH HOH . K 4 HOH B 95 395 141 HOH HOH . K 4 HOH B 96 396 311 HOH HOH . K 4 HOH B 97 397 169 HOH HOH . K 4 HOH B 98 398 32 HOH HOH . K 4 HOH B 99 399 134 HOH HOH . K 4 HOH B 100 400 113 HOH HOH . K 4 HOH B 101 401 76 HOH HOH . K 4 HOH B 102 402 328 HOH HOH . K 4 HOH B 103 403 273 HOH HOH . K 4 HOH B 104 404 243 HOH HOH . K 4 HOH B 105 405 109 HOH HOH . K 4 HOH B 106 406 165 HOH HOH . K 4 HOH B 107 407 150 HOH HOH . K 4 HOH B 108 408 260 HOH HOH . K 4 HOH B 109 409 254 HOH HOH . K 4 HOH B 110 410 177 HOH HOH . K 4 HOH B 111 411 241 HOH HOH . K 4 HOH B 112 412 86 HOH HOH . K 4 HOH B 113 413 248 HOH HOH . K 4 HOH B 114 414 227 HOH HOH . K 4 HOH B 115 415 33 HOH HOH . K 4 HOH B 116 416 223 HOH HOH . K 4 HOH B 117 417 158 HOH HOH . K 4 HOH B 118 418 221 HOH HOH . K 4 HOH B 119 419 175 HOH HOH . K 4 HOH B 120 420 166 HOH HOH . K 4 HOH B 121 421 84 HOH HOH . K 4 HOH B 122 422 310 HOH HOH . K 4 HOH B 123 423 194 HOH HOH . K 4 HOH B 124 424 196 HOH HOH . K 4 HOH B 125 425 211 HOH HOH . K 4 HOH B 126 426 182 HOH HOH . K 4 HOH B 127 427 87 HOH HOH . K 4 HOH B 128 428 191 HOH HOH . K 4 HOH B 129 429 301 HOH HOH . K 4 HOH B 130 430 85 HOH HOH . K 4 HOH B 131 431 190 HOH HOH . K 4 HOH B 132 432 30 HOH HOH . K 4 HOH B 133 433 147 HOH HOH . K 4 HOH B 134 434 294 HOH HOH . K 4 HOH B 135 435 34 HOH HOH . K 4 HOH B 136 436 263 HOH HOH . K 4 HOH B 137 437 54 HOH HOH . K 4 HOH B 138 438 236 HOH HOH . K 4 HOH B 139 439 78 HOH HOH . K 4 HOH B 140 440 94 HOH HOH . K 4 HOH B 141 441 81 HOH HOH . K 4 HOH B 142 442 138 HOH HOH . K 4 HOH B 143 443 293 HOH HOH . K 4 HOH B 144 444 149 HOH HOH . K 4 HOH B 145 445 82 HOH HOH . K 4 HOH B 146 446 259 HOH HOH . K 4 HOH B 147 447 218 HOH HOH . K 4 HOH B 148 448 193 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 3 -1.849 -3.762 -30.194 1 30.82 ? C1 EDO 204 A 1 HETATM 2 O O1 EDO . . . F 3 -2.061 -2.896 -29.072 1 42.91 ? O1 EDO 204 A 1 HETATM 3 C C2 EDO . . . F 3 -0.369 -3.811 -30.569 1 29.91 ? C2 EDO 204 A 1 HETATM 4 O O2 EDO . . . F 3 -0.042 -2.799 -31.528 1 39.78 ? O2 EDO 204 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 371 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #