data_7K6R # _model_server_result.job_id zuR3XN7qUNOrzpVJWCRJmA _model_server_result.datetime_utc '2025-01-10 16:05:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k6r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":3102}' # _entry.id 7K6R # _exptl.entry_id 7K6R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 114.12 _cell.angle_beta 95.93 _cell.angle_gamma 91.06 _cell.entry_id 7K6R _cell.length_a 27.06 _cell.length_b 35.52 _cell.length_c 41.15 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K6R _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 129 n n C1 C2 EDO sing 130 n n C1 H11 EDO sing 131 n n C1 H12 EDO sing 132 n n O1 HO1 EDO sing 133 n n C2 O2 EDO sing 134 n n C2 H21 EDO sing 135 n n C2 H22 EDO sing 136 n n O2 HO2 EDO sing 137 n n # _atom_sites.entry_id 7K6R _atom_sites.fract_transf_matrix[1][1] 0.036955 _atom_sites.fract_transf_matrix[1][2] 0.000681 _atom_sites.fract_transf_matrix[1][3] 0.004524 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028158 _atom_sites.fract_transf_matrix[2][3] 0.012765 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026825 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9ST A 1 3101 1 9ST GSK . C 3 EDO A 1 3102 1 EDO EDO . D 3 EDO A 1 3103 3 EDO EDO . E 4 HOH A 1 3201 105 HOH HOH . E 4 HOH A 2 3202 99 HOH HOH . E 4 HOH A 3 3203 146 HOH HOH . E 4 HOH A 4 3204 75 HOH HOH . E 4 HOH A 5 3205 101 HOH HOH . E 4 HOH A 6 3206 168 HOH HOH . E 4 HOH A 7 3207 34 HOH HOH . E 4 HOH A 8 3208 43 HOH HOH . E 4 HOH A 9 3209 27 HOH HOH . E 4 HOH A 10 3210 135 HOH HOH . E 4 HOH A 11 3211 38 HOH HOH . E 4 HOH A 12 3212 93 HOH HOH . E 4 HOH A 13 3213 142 HOH HOH . E 4 HOH A 14 3214 59 HOH HOH . E 4 HOH A 15 3215 54 HOH HOH . E 4 HOH A 16 3216 46 HOH HOH . E 4 HOH A 17 3217 60 HOH HOH . E 4 HOH A 18 3218 47 HOH HOH . E 4 HOH A 19 3219 88 HOH HOH . E 4 HOH A 20 3220 94 HOH HOH . E 4 HOH A 21 3221 66 HOH HOH . E 4 HOH A 22 3222 73 HOH HOH . E 4 HOH A 23 3223 128 HOH HOH . E 4 HOH A 24 3224 9 HOH HOH . E 4 HOH A 25 3225 44 HOH HOH . E 4 HOH A 26 3226 21 HOH HOH . E 4 HOH A 27 3227 65 HOH HOH . E 4 HOH A 28 3228 144 HOH HOH . E 4 HOH A 29 3229 111 HOH HOH . E 4 HOH A 30 3230 32 HOH HOH . E 4 HOH A 31 3231 6 HOH HOH . E 4 HOH A 32 3232 17 HOH HOH . E 4 HOH A 33 3233 19 HOH HOH . E 4 HOH A 34 3234 35 HOH HOH . E 4 HOH A 35 3235 160 HOH HOH . E 4 HOH A 36 3236 78 HOH HOH . E 4 HOH A 37 3237 42 HOH HOH . E 4 HOH A 38 3238 106 HOH HOH . E 4 HOH A 39 3239 4 HOH HOH . E 4 HOH A 40 3240 37 HOH HOH . E 4 HOH A 41 3241 26 HOH HOH . E 4 HOH A 42 3242 110 HOH HOH . E 4 HOH A 43 3243 50 HOH HOH . E 4 HOH A 44 3244 2 HOH HOH . E 4 HOH A 45 3245 138 HOH HOH . E 4 HOH A 46 3246 12 HOH HOH . E 4 HOH A 47 3247 126 HOH HOH . E 4 HOH A 48 3248 112 HOH HOH . E 4 HOH A 49 3249 85 HOH HOH . E 4 HOH A 50 3250 11 HOH HOH . E 4 HOH A 51 3251 10 HOH HOH . E 4 HOH A 52 3252 15 HOH HOH . E 4 HOH A 53 3253 7 HOH HOH . E 4 HOH A 54 3254 154 HOH HOH . E 4 HOH A 55 3255 103 HOH HOH . E 4 HOH A 56 3256 36 HOH HOH . E 4 HOH A 57 3257 109 HOH HOH . E 4 HOH A 58 3258 31 HOH HOH . E 4 HOH A 59 3259 18 HOH HOH . E 4 HOH A 60 3260 20 HOH HOH . E 4 HOH A 61 3261 76 HOH HOH . E 4 HOH A 62 3262 29 HOH HOH . E 4 HOH A 63 3263 68 HOH HOH . E 4 HOH A 64 3264 3 HOH HOH . E 4 HOH A 65 3265 153 HOH HOH . E 4 HOH A 66 3266 25 HOH HOH . E 4 HOH A 67 3267 72 HOH HOH . E 4 HOH A 68 3268 61 HOH HOH . E 4 HOH A 69 3269 33 HOH HOH . E 4 HOH A 70 3270 48 HOH HOH . E 4 HOH A 71 3271 28 HOH HOH . E 4 HOH A 72 3272 90 HOH HOH . E 4 HOH A 73 3273 136 HOH HOH . E 4 HOH A 74 3274 22 HOH HOH . E 4 HOH A 75 3275 108 HOH HOH . E 4 HOH A 76 3276 122 HOH HOH . E 4 HOH A 77 3277 5 HOH HOH . E 4 HOH A 78 3278 1 HOH HOH . E 4 HOH A 79 3279 64 HOH HOH . E 4 HOH A 80 3280 127 HOH HOH . E 4 HOH A 81 3281 116 HOH HOH . E 4 HOH A 82 3282 53 HOH HOH . E 4 HOH A 83 3283 49 HOH HOH . E 4 HOH A 84 3284 151 HOH HOH . E 4 HOH A 85 3285 148 HOH HOH . E 4 HOH A 86 3286 45 HOH HOH . E 4 HOH A 87 3287 30 HOH HOH . E 4 HOH A 88 3288 84 HOH HOH . E 4 HOH A 89 3289 156 HOH HOH . E 4 HOH A 90 3290 157 HOH HOH . E 4 HOH A 91 3291 123 HOH HOH . E 4 HOH A 92 3292 52 HOH HOH . E 4 HOH A 93 3293 149 HOH HOH . E 4 HOH A 94 3294 139 HOH HOH . E 4 HOH A 95 3295 164 HOH HOH . E 4 HOH A 96 3296 98 HOH HOH . E 4 HOH A 97 3297 81 HOH HOH . E 4 HOH A 98 3298 121 HOH HOH . E 4 HOH A 99 3299 13 HOH HOH . E 4 HOH A 100 3300 169 HOH HOH . E 4 HOH A 101 3301 95 HOH HOH . E 4 HOH A 102 3302 132 HOH HOH . E 4 HOH A 103 3303 83 HOH HOH . E 4 HOH A 104 3304 55 HOH HOH . E 4 HOH A 105 3305 113 HOH HOH . E 4 HOH A 106 3306 107 HOH HOH . E 4 HOH A 107 3307 137 HOH HOH . E 4 HOH A 108 3308 158 HOH HOH . E 4 HOH A 109 3309 124 HOH HOH . E 4 HOH A 110 3310 120 HOH HOH . E 4 HOH A 111 3311 147 HOH HOH . E 4 HOH A 112 3312 150 HOH HOH . E 4 HOH A 113 3313 162 HOH HOH . E 4 HOH A 114 3314 140 HOH HOH . E 4 HOH A 115 3315 118 HOH HOH . E 4 HOH A 116 3316 77 HOH HOH . E 4 HOH A 117 3317 79 HOH HOH . E 4 HOH A 118 3318 67 HOH HOH . E 4 HOH A 119 3319 86 HOH HOH . E 4 HOH A 120 3320 16 HOH HOH . E 4 HOH A 121 3321 131 HOH HOH . E 4 HOH A 122 3322 8 HOH HOH . E 4 HOH A 123 3323 56 HOH HOH . E 4 HOH A 124 3324 117 HOH HOH . E 4 HOH A 125 3325 87 HOH HOH . E 4 HOH A 126 3326 58 HOH HOH . E 4 HOH A 127 3327 104 HOH HOH . E 4 HOH A 128 3328 71 HOH HOH . E 4 HOH A 129 3329 152 HOH HOH . E 4 HOH A 130 3330 57 HOH HOH . E 4 HOH A 131 3331 51 HOH HOH . E 4 HOH A 132 3332 166 HOH HOH . E 4 HOH A 133 3333 80 HOH HOH . E 4 HOH A 134 3334 102 HOH HOH . E 4 HOH A 135 3335 159 HOH HOH . E 4 HOH A 136 3336 134 HOH HOH . E 4 HOH A 137 3337 114 HOH HOH . E 4 HOH A 138 3338 92 HOH HOH . E 4 HOH A 139 3339 163 HOH HOH . E 4 HOH A 140 3340 91 HOH HOH . E 4 HOH A 141 3341 74 HOH HOH . E 4 HOH A 142 3342 115 HOH HOH . E 4 HOH A 143 3343 62 HOH HOH . E 4 HOH A 144 3344 41 HOH HOH . E 4 HOH A 145 3345 39 HOH HOH . E 4 HOH A 146 3346 97 HOH HOH . E 4 HOH A 147 3347 23 HOH HOH . E 4 HOH A 148 3348 89 HOH HOH . E 4 HOH A 149 3349 96 HOH HOH . E 4 HOH A 150 3350 70 HOH HOH . E 4 HOH A 151 3351 24 HOH HOH . E 4 HOH A 152 3352 129 HOH HOH . E 4 HOH A 153 3353 133 HOH HOH . E 4 HOH A 154 3354 63 HOH HOH . E 4 HOH A 155 3355 14 HOH HOH . E 4 HOH A 156 3356 145 HOH HOH . E 4 HOH A 157 3357 130 HOH HOH . E 4 HOH A 158 3358 161 HOH HOH . E 4 HOH A 159 3359 69 HOH HOH . E 4 HOH A 160 3360 170 HOH HOH . E 4 HOH A 161 3361 40 HOH HOH . E 4 HOH A 162 3362 155 HOH HOH . E 4 HOH A 163 3363 167 HOH HOH . E 4 HOH A 164 3364 100 HOH HOH . E 4 HOH A 165 3365 125 HOH HOH . E 4 HOH A 166 3366 165 HOH HOH . E 4 HOH A 167 3367 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 4.125 5.504 -15.029 1 43.9 ? C1 EDO 3102 A 1 HETATM 2 O O1 EDO . . . C 3 4.323 5.022 -16.362 1 50.57 ? O1 EDO 3102 A 1 HETATM 3 C C2 EDO . . . C 3 2.703 6.025 -14.897 1 35.31 ? C2 EDO 3102 A 1 HETATM 4 O O2 EDO . . . C 3 1.802 4.964 -15.213 1 30.99 ? O2 EDO 3102 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #