data_7KAF # _model_server_result.job_id v6PJj2rqsjz8JXjeD3akXg _model_server_result.datetime_utc '2024-11-24 23:36:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kaf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 7KAF # _exptl.entry_id 7KAF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KAF _cell.length_a 89.824 _cell.length_b 89.824 _cell.length_c 133.773 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KAF _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 6 'crystal symmetry operation' 6_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 7 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 8 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 61 A HIS 41 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc2 A OE2 GLU 81 A GLU 80 1_555 E MN MN . A MN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc3 A OD2 ASP 109 A ASP 108 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc4 A OD1 ASP 109 A ASP 108 1_555 E MN MN . A MN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc5 A OE2 GLU 120 A GLU 119 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc6 A O ILE 121 A ILE 120 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc7 B O1 E4Z . A E4Z 201 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc8 B O2 E4Z . A E4Z 201 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc9 B O2 E4Z . A E4Z 201 1_555 E MN MN . A MN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc10 B O3 E4Z . A E4Z 201 1_555 E MN MN . A MN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? metalc ? metalc11 E MN MN . A MN 204 1_555 H O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc12 E MN MN . A MN 204 1_555 H O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 457 n n S O2 SO4 doub 458 n n S O3 SO4 sing 459 n n S O4 SO4 sing 460 n n # _atom_sites.entry_id 7KAF _atom_sites.fract_transf_matrix[1][1] 0.011133 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011133 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 E4Z A 1 201 300 E4Z E4Z . C 3 QQ4 A 1 202 420 QQ4 PVP . D 4 MN A 1 203 301 MN MN . E 4 MN A 1 204 302 MN MN . F 5 SO4 A 1 205 1 SO4 SO4 . G 5 SO4 A 1 206 2 SO4 SO4 . H 6 HOH A 1 301 6 HOH HOH . H 6 HOH A 2 302 50 HOH HOH . H 6 HOH A 3 303 25 HOH HOH . H 6 HOH A 4 304 10 HOH HOH . H 6 HOH A 5 305 24 HOH HOH . H 6 HOH A 6 306 9 HOH HOH . H 6 HOH A 7 307 13 HOH HOH . H 6 HOH A 8 308 16 HOH HOH . H 6 HOH A 9 309 54 HOH HOH . H 6 HOH A 10 310 11 HOH HOH . H 6 HOH A 11 311 21 HOH HOH . H 6 HOH A 12 312 56 HOH HOH . H 6 HOH A 13 313 28 HOH HOH . H 6 HOH A 14 314 2 HOH HOH . H 6 HOH A 15 315 20 HOH HOH . H 6 HOH A 16 316 12 HOH HOH . H 6 HOH A 17 317 14 HOH HOH . H 6 HOH A 18 318 69 HOH HOH . H 6 HOH A 19 319 18 HOH HOH . H 6 HOH A 20 320 38 HOH HOH . H 6 HOH A 21 321 5 HOH HOH . H 6 HOH A 22 322 23 HOH HOH . H 6 HOH A 23 323 52 HOH HOH . H 6 HOH A 24 324 3 HOH HOH . H 6 HOH A 25 325 59 HOH HOH . H 6 HOH A 26 326 32 HOH HOH . H 6 HOH A 27 327 42 HOH HOH . H 6 HOH A 28 328 19 HOH HOH . H 6 HOH A 29 329 63 HOH HOH . H 6 HOH A 30 330 55 HOH HOH . H 6 HOH A 31 331 17 HOH HOH . H 6 HOH A 32 332 4 HOH HOH . H 6 HOH A 33 333 61 HOH HOH . H 6 HOH A 34 334 41 HOH HOH . H 6 HOH A 35 335 8 HOH HOH . H 6 HOH A 36 336 64 HOH HOH . H 6 HOH A 37 337 36 HOH HOH . H 6 HOH A 38 338 70 HOH HOH . H 6 HOH A 39 339 37 HOH HOH . H 6 HOH A 40 340 48 HOH HOH . H 6 HOH A 41 341 53 HOH HOH . H 6 HOH A 42 342 1 HOH HOH . H 6 HOH A 43 343 31 HOH HOH . H 6 HOH A 44 344 47 HOH HOH . H 6 HOH A 45 345 29 HOH HOH . H 6 HOH A 46 346 39 HOH HOH . H 6 HOH A 47 347 71 HOH HOH . H 6 HOH A 48 348 15 HOH HOH . H 6 HOH A 49 349 33 HOH HOH . H 6 HOH A 50 350 51 HOH HOH . H 6 HOH A 51 351 34 HOH HOH . H 6 HOH A 52 352 62 HOH HOH . H 6 HOH A 53 353 46 HOH HOH . H 6 HOH A 54 354 26 HOH HOH . H 6 HOH A 55 355 22 HOH HOH . H 6 HOH A 56 356 30 HOH HOH . H 6 HOH A 57 357 65 HOH HOH . H 6 HOH A 58 358 27 HOH HOH . H 6 HOH A 59 359 43 HOH HOH . H 6 HOH A 60 360 58 HOH HOH . H 6 HOH A 61 361 68 HOH HOH . H 6 HOH A 62 362 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 5 33.925 3.972 14.372 1 104.31 ? S SO4 205 A 1 HETATM 2 O O1 SO4 . . . F 5 35.088 4.698 13.869 1 91.75 ? O1 SO4 205 A 1 HETATM 3 O O2 SO4 . . . F 5 32.707 4.591 13.856 1 88.9 ? O2 SO4 205 A 1 HETATM 4 O O3 SO4 . . . F 5 33.988 2.583 13.927 1 80.44 ? O3 SO4 205 A 1 HETATM 5 O O4 SO4 . . . F 5 33.915 4.015 15.832 1 98.91 ? O4 SO4 205 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 5 #