data_7KBO
#
_model_server_result.job_id            DTSEYkZHAaduhU9i7NTlvA 
_model_server_result.datetime_utc      '2025-01-10 18:51:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kbo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    7KBO 
#
_exptl.entry_id    7KBO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.983 
_cell.angle_gamma         90 
_cell.entry_id            7KBO 
_cell.length_a            73.707 
_cell.length_b            86.018 
_cell.length_c            36.682 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7KBO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 87 A CYS 87 1_555 A SG CYS 87 A CYS 87 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf3 A SG CYS 152 A CYS 152 1_555 A SG CYS 217 A CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7KBO 
_atom_sites.fract_transf_matrix[1][1]    0.013567 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007209 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011625 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.03087 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 301 1 EDO EDO . 
C 2 EDO A 1 302 2 EDO EDO . 
D 2 EDO A 1 303 3 EDO EDO . 
E 2 EDO A 1 304 6 EDO EDO . 
F 3 HOH A 1 401 85 HOH HOH . 
F 3 HOH A 2 402 54 HOH HOH . 
F 3 HOH A 3 403 69 HOH HOH . 
F 3 HOH A 4 404 23 HOH HOH . 
F 3 HOH A 5 405 111 HOH HOH . 
F 3 HOH A 6 406 32 HOH HOH . 
F 3 HOH A 7 407 37 HOH HOH . 
F 3 HOH A 8 408 16 HOH HOH . 
F 3 HOH A 9 409 28 HOH HOH . 
F 3 HOH A 10 410 103 HOH HOH . 
F 3 HOH A 11 411 18 HOH HOH . 
F 3 HOH A 12 412 40 HOH HOH . 
F 3 HOH A 13 413 7 HOH HOH . 
F 3 HOH A 14 414 74 HOH HOH . 
F 3 HOH A 15 415 9 HOH HOH . 
F 3 HOH A 16 416 21 HOH HOH . 
F 3 HOH A 17 417 96 HOH HOH . 
F 3 HOH A 18 418 15 HOH HOH . 
F 3 HOH A 19 419 53 HOH HOH . 
F 3 HOH A 20 420 89 HOH HOH . 
F 3 HOH A 21 421 38 HOH HOH . 
F 3 HOH A 22 422 49 HOH HOH . 
F 3 HOH A 23 423 2 HOH HOH . 
F 3 HOH A 24 424 88 HOH HOH . 
F 3 HOH A 25 425 73 HOH HOH . 
F 3 HOH A 26 426 57 HOH HOH . 
F 3 HOH A 27 427 13 HOH HOH . 
F 3 HOH A 28 428 64 HOH HOH . 
F 3 HOH A 29 429 5 HOH HOH . 
F 3 HOH A 30 430 55 HOH HOH . 
F 3 HOH A 31 431 19 HOH HOH . 
F 3 HOH A 32 432 30 HOH HOH . 
F 3 HOH A 33 433 11 HOH HOH . 
F 3 HOH A 34 434 31 HOH HOH . 
F 3 HOH A 35 435 6 HOH HOH . 
F 3 HOH A 36 436 42 HOH HOH . 
F 3 HOH A 37 437 10 HOH HOH . 
F 3 HOH A 38 438 90 HOH HOH . 
F 3 HOH A 39 439 41 HOH HOH . 
F 3 HOH A 40 440 105 HOH HOH . 
F 3 HOH A 41 441 39 HOH HOH . 
F 3 HOH A 42 442 8 HOH HOH . 
F 3 HOH A 43 443 14 HOH HOH . 
F 3 HOH A 44 444 26 HOH HOH . 
F 3 HOH A 45 445 60 HOH HOH . 
F 3 HOH A 46 446 24 HOH HOH . 
F 3 HOH A 47 447 12 HOH HOH . 
F 3 HOH A 48 448 65 HOH HOH . 
F 3 HOH A 49 449 76 HOH HOH . 
F 3 HOH A 50 450 56 HOH HOH . 
F 3 HOH A 51 451 1 HOH HOH . 
F 3 HOH A 52 452 78 HOH HOH . 
F 3 HOH A 53 453 59 HOH HOH . 
F 3 HOH A 54 454 43 HOH HOH . 
F 3 HOH A 55 455 36 HOH HOH . 
F 3 HOH A 56 456 17 HOH HOH . 
F 3 HOH A 57 457 95 HOH HOH . 
F 3 HOH A 58 458 91 HOH HOH . 
F 3 HOH A 59 459 47 HOH HOH . 
F 3 HOH A 60 460 83 HOH HOH . 
F 3 HOH A 61 461 72 HOH HOH . 
F 3 HOH A 62 462 29 HOH HOH . 
F 3 HOH A 63 463 22 HOH HOH . 
F 3 HOH A 64 464 51 HOH HOH . 
F 3 HOH A 65 465 101 HOH HOH . 
F 3 HOH A 66 466 98 HOH HOH . 
F 3 HOH A 67 467 25 HOH HOH . 
F 3 HOH A 68 468 50 HOH HOH . 
F 3 HOH A 69 469 82 HOH HOH . 
F 3 HOH A 70 470 63 HOH HOH . 
F 3 HOH A 71 471 4 HOH HOH . 
F 3 HOH A 72 472 46 HOH HOH . 
F 3 HOH A 73 473 44 HOH HOH . 
F 3 HOH A 74 474 70 HOH HOH . 
F 3 HOH A 75 475 86 HOH HOH . 
F 3 HOH A 76 476 68 HOH HOH . 
F 3 HOH A 77 477 92 HOH HOH . 
F 3 HOH A 78 478 20 HOH HOH . 
F 3 HOH A 79 479 58 HOH HOH . 
F 3 HOH A 80 480 34 HOH HOH . 
F 3 HOH A 81 481 106 HOH HOH . 
F 3 HOH A 82 482 48 HOH HOH . 
F 3 HOH A 83 483 71 HOH HOH . 
F 3 HOH A 84 484 35 HOH HOH . 
F 3 HOH A 85 485 52 HOH HOH . 
F 3 HOH A 86 486 94 HOH HOH . 
F 3 HOH A 87 487 110 HOH HOH . 
F 3 HOH A 88 488 45 HOH HOH . 
F 3 HOH A 89 489 80 HOH HOH . 
F 3 HOH A 90 490 67 HOH HOH . 
F 3 HOH A 91 491 99 HOH HOH . 
F 3 HOH A 92 492 75 HOH HOH . 
F 3 HOH A 93 493 3 HOH HOH . 
F 3 HOH A 94 494 27 HOH HOH . 
F 3 HOH A 95 495 33 HOH HOH . 
F 3 HOH A 96 496 87 HOH HOH . 
F 3 HOH A 97 497 62 HOH HOH . 
F 3 HOH A 98 498 109 HOH HOH . 
F 3 HOH A 99 499 81 HOH HOH . 
F 3 HOH A 100 500 113 HOH HOH . 
F 3 HOH A 101 501 108 HOH HOH . 
F 3 HOH A 102 502 102 HOH HOH . 
F 3 HOH A 103 503 66 HOH HOH . 
F 3 HOH A 104 504 93 HOH HOH . 
F 3 HOH A 105 505 61 HOH HOH . 
F 3 HOH A 106 506 97 HOH HOH . 
F 3 HOH A 107 507 112 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 -11.111 -32.483 -5.485 1 23.12 ? C1 EDO 301 A 1 
HETATM 2 O O1 EDO . . . B 2 -10.088 -31.734 -4.821 1 21.23 ? O1 EDO 301 A 1 
HETATM 3 C C2 EDO . . . B 2 -11.013 -32.247 -6.988 1 26.11 ? C2 EDO 301 A 1 
HETATM 4 O O2 EDO . . . B 2 -9.781 -32.781 -7.487 1 25.82 ? O2 EDO 301 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           344 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#