data_7KC5 # _model_server_result.job_id vYXdMu-gmJ8ldtE0HYZRIA _model_server_result.datetime_utc '2024-11-15 13:24:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kc5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7KC5 # _exptl.entry_id 7KC5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KC5 _cell.length_a 36.514 _cell.length_b 75.412 _cell.length_c 133.294 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KC5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (z,x,y)' _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 12 A ASP 137 1_555 C MG MG . A MG 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc2 A OD2 ASP 12 A ASP 137 1_555 C MG MG . A MG 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc3 A OG SER 14 A SER 139 1_555 C MG MG . A MG 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc4 A OG1 THR 81 A THR 206 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc5 A OD1 ASP 114 A ASP 239 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.856 ? metalc ? metalc6 B OD2 ASP 12 C ASP 137 1_555 E MG MG . C MG 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc7 B OG SER 14 C SER 139 1_555 E MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc8 B OG1 THR 81 C THR 206 1_555 E MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc9 B OD1 ASP 114 C ASP 239 1_555 E MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7KC5 _atom_sites.fract_transf_matrix[1][1] 0.027387 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01326 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007502 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 1 MG MG . D 3 BJZ A 1 402 2 BJZ BJZ . E 2 MG C 1 401 2 MG MG . F 3 BJZ C 1 402 1 BJZ BJZ . G 4 HOH A 1 501 214 HOH HOH . G 4 HOH A 2 502 150 HOH HOH . G 4 HOH A 3 503 24 HOH HOH . G 4 HOH A 4 504 66 HOH HOH . G 4 HOH A 5 505 80 HOH HOH . G 4 HOH A 6 506 84 HOH HOH . G 4 HOH A 7 507 127 HOH HOH . G 4 HOH A 8 508 119 HOH HOH . G 4 HOH A 9 509 86 HOH HOH . G 4 HOH A 10 510 147 HOH HOH . G 4 HOH A 11 511 74 HOH HOH . G 4 HOH A 12 512 195 HOH HOH . G 4 HOH A 13 513 18 HOH HOH . G 4 HOH A 14 514 76 HOH HOH . G 4 HOH A 15 515 28 HOH HOH . G 4 HOH A 16 516 8 HOH HOH . G 4 HOH A 17 517 40 HOH HOH . G 4 HOH A 18 518 14 HOH HOH . G 4 HOH A 19 519 141 HOH HOH . G 4 HOH A 20 520 20 HOH HOH . G 4 HOH A 21 521 97 HOH HOH . G 4 HOH A 22 522 165 HOH HOH . G 4 HOH A 23 523 234 HOH HOH . G 4 HOH A 24 524 185 HOH HOH . G 4 HOH A 25 525 146 HOH HOH . G 4 HOH A 26 526 49 HOH HOH . G 4 HOH A 27 527 3 HOH HOH . G 4 HOH A 28 528 96 HOH HOH . G 4 HOH A 29 529 124 HOH HOH . G 4 HOH A 30 530 191 HOH HOH . G 4 HOH A 31 531 177 HOH HOH . G 4 HOH A 32 532 142 HOH HOH . G 4 HOH A 33 533 68 HOH HOH . G 4 HOH A 34 534 106 HOH HOH . G 4 HOH A 35 535 155 HOH HOH . G 4 HOH A 36 536 167 HOH HOH . G 4 HOH A 37 537 65 HOH HOH . G 4 HOH A 38 538 157 HOH HOH . G 4 HOH A 39 539 176 HOH HOH . G 4 HOH A 40 540 62 HOH HOH . G 4 HOH A 41 541 136 HOH HOH . G 4 HOH A 42 542 57 HOH HOH . G 4 HOH A 43 543 101 HOH HOH . G 4 HOH A 44 544 11 HOH HOH . G 4 HOH A 45 545 137 HOH HOH . G 4 HOH A 46 546 91 HOH HOH . G 4 HOH A 47 547 59 HOH HOH . G 4 HOH A 48 548 77 HOH HOH . G 4 HOH A 49 549 19 HOH HOH . G 4 HOH A 50 550 152 HOH HOH . G 4 HOH A 51 551 88 HOH HOH . G 4 HOH A 52 552 51 HOH HOH . G 4 HOH A 53 553 72 HOH HOH . G 4 HOH A 54 554 220 HOH HOH . G 4 HOH A 55 555 89 HOH HOH . G 4 HOH A 56 556 180 HOH HOH . G 4 HOH A 57 557 56 HOH HOH . G 4 HOH A 58 558 201 HOH HOH . G 4 HOH A 59 559 75 HOH HOH . G 4 HOH A 60 560 153 HOH HOH . G 4 HOH A 61 561 160 HOH HOH . G 4 HOH A 62 562 161 HOH HOH . G 4 HOH A 63 563 22 HOH HOH . G 4 HOH A 64 564 144 HOH HOH . G 4 HOH A 65 565 198 HOH HOH . G 4 HOH A 66 566 232 HOH HOH . G 4 HOH A 67 567 149 HOH HOH . G 4 HOH A 68 568 209 HOH HOH . G 4 HOH A 69 569 116 HOH HOH . G 4 HOH A 70 570 210 HOH HOH . G 4 HOH A 71 571 103 HOH HOH . G 4 HOH A 72 572 135 HOH HOH . G 4 HOH A 73 573 78 HOH HOH . G 4 HOH A 74 574 32 HOH HOH . G 4 HOH A 75 575 163 HOH HOH . G 4 HOH A 76 576 202 HOH HOH . G 4 HOH A 77 577 203 HOH HOH . G 4 HOH A 78 578 224 HOH HOH . G 4 HOH A 79 579 69 HOH HOH . G 4 HOH A 80 580 139 HOH HOH . G 4 HOH A 81 581 115 HOH HOH . G 4 HOH A 82 582 145 HOH HOH . G 4 HOH A 83 583 208 HOH HOH . G 4 HOH A 84 584 235 HOH HOH . G 4 HOH A 85 585 215 HOH HOH . G 4 HOH A 86 586 218 HOH HOH . G 4 HOH A 87 587 184 HOH HOH . G 4 HOH A 88 588 118 HOH HOH . G 4 HOH A 89 589 140 HOH HOH . G 4 HOH A 90 590 199 HOH HOH . G 4 HOH A 91 591 213 HOH HOH . G 4 HOH A 92 592 205 HOH HOH . G 4 HOH A 93 593 229 HOH HOH . H 4 HOH C 1 501 216 HOH HOH . H 4 HOH C 2 502 212 HOH HOH . H 4 HOH C 3 503 43 HOH HOH . H 4 HOH C 4 504 29 HOH HOH . H 4 HOH C 5 505 108 HOH HOH . H 4 HOH C 6 506 30 HOH HOH . H 4 HOH C 7 507 90 HOH HOH . H 4 HOH C 8 508 181 HOH HOH . H 4 HOH C 9 509 112 HOH HOH . H 4 HOH C 10 510 54 HOH HOH . H 4 HOH C 11 511 197 HOH HOH . H 4 HOH C 12 512 44 HOH HOH . H 4 HOH C 13 513 123 HOH HOH . H 4 HOH C 14 514 100 HOH HOH . H 4 HOH C 15 515 111 HOH HOH . H 4 HOH C 16 516 95 HOH HOH . H 4 HOH C 17 517 13 HOH HOH . H 4 HOH C 18 518 27 HOH HOH . H 4 HOH C 19 519 159 HOH HOH . H 4 HOH C 20 520 10 HOH HOH . H 4 HOH C 21 521 38 HOH HOH . H 4 HOH C 22 522 4 HOH HOH . H 4 HOH C 23 523 114 HOH HOH . H 4 HOH C 24 524 37 HOH HOH . H 4 HOH C 25 525 93 HOH HOH . H 4 HOH C 26 526 1 HOH HOH . H 4 HOH C 27 527 110 HOH HOH . H 4 HOH C 28 528 46 HOH HOH . H 4 HOH C 29 529 162 HOH HOH . H 4 HOH C 30 530 109 HOH HOH . H 4 HOH C 31 531 21 HOH HOH . H 4 HOH C 32 532 70 HOH HOH . H 4 HOH C 33 533 33 HOH HOH . H 4 HOH C 34 534 134 HOH HOH . H 4 HOH C 35 535 25 HOH HOH . H 4 HOH C 36 536 5 HOH HOH . H 4 HOH C 37 537 193 HOH HOH . H 4 HOH C 38 538 53 HOH HOH . H 4 HOH C 39 539 58 HOH HOH . H 4 HOH C 40 540 15 HOH HOH . H 4 HOH C 41 541 207 HOH HOH . H 4 HOH C 42 542 42 HOH HOH . H 4 HOH C 43 543 82 HOH HOH . H 4 HOH C 44 544 92 HOH HOH . H 4 HOH C 45 545 182 HOH HOH . H 4 HOH C 46 546 50 HOH HOH . H 4 HOH C 47 547 41 HOH HOH . H 4 HOH C 48 548 17 HOH HOH . H 4 HOH C 49 549 143 HOH HOH . H 4 HOH C 50 550 211 HOH HOH . H 4 HOH C 51 551 63 HOH HOH . H 4 HOH C 52 552 226 HOH HOH . H 4 HOH C 53 553 12 HOH HOH . H 4 HOH C 54 554 156 HOH HOH . H 4 HOH C 55 555 225 HOH HOH . H 4 HOH C 56 556 39 HOH HOH . H 4 HOH C 57 557 206 HOH HOH . H 4 HOH C 58 558 31 HOH HOH . H 4 HOH C 59 559 125 HOH HOH . H 4 HOH C 60 560 2 HOH HOH . H 4 HOH C 61 561 60 HOH HOH . H 4 HOH C 62 562 73 HOH HOH . H 4 HOH C 63 563 7 HOH HOH . H 4 HOH C 64 564 222 HOH HOH . H 4 HOH C 65 565 55 HOH HOH . H 4 HOH C 66 566 85 HOH HOH . H 4 HOH C 67 567 130 HOH HOH . H 4 HOH C 68 568 154 HOH HOH . H 4 HOH C 69 569 6 HOH HOH . H 4 HOH C 70 570 9 HOH HOH . H 4 HOH C 71 571 26 HOH HOH . H 4 HOH C 72 572 23 HOH HOH . H 4 HOH C 73 573 200 HOH HOH . H 4 HOH C 74 574 121 HOH HOH . H 4 HOH C 75 575 67 HOH HOH . H 4 HOH C 76 576 47 HOH HOH . H 4 HOH C 77 577 166 HOH HOH . H 4 HOH C 78 578 192 HOH HOH . H 4 HOH C 79 579 186 HOH HOH . H 4 HOH C 80 580 61 HOH HOH . H 4 HOH C 81 581 99 HOH HOH . H 4 HOH C 82 582 174 HOH HOH . H 4 HOH C 83 583 83 HOH HOH . H 4 HOH C 84 584 187 HOH HOH . H 4 HOH C 85 585 94 HOH HOH . H 4 HOH C 86 586 52 HOH HOH . H 4 HOH C 87 587 16 HOH HOH . H 4 HOH C 88 588 34 HOH HOH . H 4 HOH C 89 589 48 HOH HOH . H 4 HOH C 90 590 217 HOH HOH . H 4 HOH C 91 591 71 HOH HOH . H 4 HOH C 92 592 87 HOH HOH . H 4 HOH C 93 593 45 HOH HOH . H 4 HOH C 94 594 105 HOH HOH . H 4 HOH C 95 595 175 HOH HOH . H 4 HOH C 96 596 131 HOH HOH . H 4 HOH C 97 597 138 HOH HOH . H 4 HOH C 98 598 194 HOH HOH . H 4 HOH C 99 599 107 HOH HOH . H 4 HOH C 100 600 113 HOH HOH . H 4 HOH C 101 601 98 HOH HOH . H 4 HOH C 102 602 122 HOH HOH . H 4 HOH C 103 603 81 HOH HOH . H 4 HOH C 104 604 196 HOH HOH . H 4 HOH C 105 605 36 HOH HOH . H 4 HOH C 106 606 132 HOH HOH . H 4 HOH C 107 607 126 HOH HOH . H 4 HOH C 108 608 117 HOH HOH . H 4 HOH C 109 609 221 HOH HOH . H 4 HOH C 110 610 189 HOH HOH . H 4 HOH C 111 611 170 HOH HOH . H 4 HOH C 112 612 129 HOH HOH . H 4 HOH C 113 613 233 HOH HOH . H 4 HOH C 114 614 64 HOH HOH . H 4 HOH C 115 615 168 HOH HOH . H 4 HOH C 116 616 188 HOH HOH . H 4 HOH C 117 617 35 HOH HOH . H 4 HOH C 118 618 173 HOH HOH . H 4 HOH C 119 619 104 HOH HOH . H 4 HOH C 120 620 172 HOH HOH . H 4 HOH C 121 621 178 HOH HOH . H 4 HOH C 122 622 148 HOH HOH . H 4 HOH C 123 623 151 HOH HOH . H 4 HOH C 124 624 164 HOH HOH . H 4 HOH C 125 625 79 HOH HOH . H 4 HOH C 126 626 120 HOH HOH . H 4 HOH C 127 627 219 HOH HOH . H 4 HOH C 128 628 171 HOH HOH . H 4 HOH C 129 629 102 HOH HOH . H 4 HOH C 130 630 128 HOH HOH . H 4 HOH C 131 631 169 HOH HOH . H 4 HOH C 132 632 179 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -15.7 _atom_site.Cartn_y -9.071 _atom_site.Cartn_z -19.511 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #