data_7KCN # _model_server_result.job_id lJi26pnOQsclyWXz5C1AMw _model_server_result.datetime_utc '2024-11-26 21:54:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kcn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7KCN # _exptl.entry_id 7KCN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KCN _cell.length_a 67.03 _cell.length_b 67.03 _cell.length_c 116.89 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KCN _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall 'P 4w 2c' _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 67.03 0 116.89 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 7KCN _atom_sites.fract_transf_matrix[1][1] 0.014919 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014919 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008555 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 201 203 EDO EDO . D 2 EDO A 1 202 205 EDO EDO . E 2 EDO A 1 203 206 EDO EDO . F 2 EDO A 1 204 209 EDO EDO . G 3 PO4 A 1 205 301 PO4 PO4 . H 2 EDO B 1 201 201 EDO EDO . I 2 EDO B 1 202 202 EDO EDO . J 2 EDO B 1 203 204 EDO EDO . K 2 EDO B 1 204 207 EDO EDO . L 2 EDO B 1 205 208 EDO EDO . M 4 HOH A 1 301 75 HOH HOH . M 4 HOH A 2 302 55 HOH HOH . M 4 HOH A 3 303 93 HOH HOH . M 4 HOH A 4 304 189 HOH HOH . M 4 HOH A 5 305 192 HOH HOH . M 4 HOH A 6 306 164 HOH HOH . M 4 HOH A 7 307 172 HOH HOH . M 4 HOH A 8 308 82 HOH HOH . M 4 HOH A 9 309 113 HOH HOH . M 4 HOH A 10 310 80 HOH HOH . M 4 HOH A 11 311 199 HOH HOH . M 4 HOH A 12 312 73 HOH HOH . M 4 HOH A 13 313 23 HOH HOH . M 4 HOH A 14 314 58 HOH HOH . M 4 HOH A 15 315 54 HOH HOH . M 4 HOH A 16 316 4 HOH HOH . M 4 HOH A 17 317 11 HOH HOH . M 4 HOH A 18 318 112 HOH HOH . M 4 HOH A 19 319 203 HOH HOH . M 4 HOH A 20 320 39 HOH HOH . M 4 HOH A 21 321 111 HOH HOH . M 4 HOH A 22 322 10 HOH HOH . M 4 HOH A 23 323 2 HOH HOH . M 4 HOH A 24 324 32 HOH HOH . M 4 HOH A 25 325 12 HOH HOH . M 4 HOH A 26 326 15 HOH HOH . M 4 HOH A 27 327 5 HOH HOH . M 4 HOH A 28 328 27 HOH HOH . M 4 HOH A 29 329 17 HOH HOH . M 4 HOH A 30 330 121 HOH HOH . M 4 HOH A 31 331 99 HOH HOH . M 4 HOH A 32 332 94 HOH HOH . M 4 HOH A 33 333 123 HOH HOH . M 4 HOH A 34 334 118 HOH HOH . M 4 HOH A 35 335 37 HOH HOH . M 4 HOH A 36 336 16 HOH HOH . M 4 HOH A 37 337 13 HOH HOH . M 4 HOH A 38 338 91 HOH HOH . M 4 HOH A 39 339 8 HOH HOH . M 4 HOH A 40 340 29 HOH HOH . M 4 HOH A 41 341 61 HOH HOH . M 4 HOH A 42 342 50 HOH HOH . M 4 HOH A 43 343 87 HOH HOH . M 4 HOH A 44 344 35 HOH HOH . M 4 HOH A 45 345 165 HOH HOH . M 4 HOH A 46 346 169 HOH HOH . M 4 HOH A 47 347 18 HOH HOH . M 4 HOH A 48 348 52 HOH HOH . M 4 HOH A 49 349 74 HOH HOH . M 4 HOH A 50 350 122 HOH HOH . M 4 HOH A 51 351 128 HOH HOH . M 4 HOH A 52 352 22 HOH HOH . M 4 HOH A 53 353 141 HOH HOH . M 4 HOH A 54 354 124 HOH HOH . M 4 HOH A 55 355 31 HOH HOH . M 4 HOH A 56 356 25 HOH HOH . M 4 HOH A 57 357 179 HOH HOH . M 4 HOH A 58 358 1 HOH HOH . M 4 HOH A 59 359 143 HOH HOH . M 4 HOH A 60 360 38 HOH HOH . M 4 HOH A 61 361 3 HOH HOH . M 4 HOH A 62 362 7 HOH HOH . M 4 HOH A 63 363 56 HOH HOH . M 4 HOH A 64 364 70 HOH HOH . M 4 HOH A 65 365 120 HOH HOH . M 4 HOH A 66 366 154 HOH HOH . M 4 HOH A 67 367 104 HOH HOH . M 4 HOH A 68 368 137 HOH HOH . M 4 HOH A 69 369 109 HOH HOH . M 4 HOH A 70 370 188 HOH HOH . M 4 HOH A 71 371 167 HOH HOH . M 4 HOH A 72 372 47 HOH HOH . M 4 HOH A 73 373 41 HOH HOH . M 4 HOH A 74 374 53 HOH HOH . M 4 HOH A 75 375 66 HOH HOH . M 4 HOH A 76 376 119 HOH HOH . M 4 HOH A 77 377 146 HOH HOH . M 4 HOH A 78 378 138 HOH HOH . M 4 HOH A 79 379 92 HOH HOH . M 4 HOH A 80 380 45 HOH HOH . M 4 HOH A 81 381 108 HOH HOH . M 4 HOH A 82 382 71 HOH HOH . M 4 HOH A 83 383 144 HOH HOH . M 4 HOH A 84 384 76 HOH HOH . M 4 HOH A 85 385 130 HOH HOH . M 4 HOH A 86 386 168 HOH HOH . M 4 HOH A 87 387 126 HOH HOH . M 4 HOH A 88 388 135 HOH HOH . M 4 HOH A 89 389 158 HOH HOH . M 4 HOH A 90 390 68 HOH HOH . M 4 HOH A 91 391 145 HOH HOH . M 4 HOH A 92 392 197 HOH HOH . M 4 HOH A 93 393 166 HOH HOH . M 4 HOH A 94 394 198 HOH HOH . M 4 HOH A 95 395 51 HOH HOH . M 4 HOH A 96 396 21 HOH HOH . M 4 HOH A 97 397 117 HOH HOH . M 4 HOH A 98 398 163 HOH HOH . M 4 HOH A 99 399 125 HOH HOH . M 4 HOH A 100 400 59 HOH HOH . M 4 HOH A 101 401 136 HOH HOH . M 4 HOH A 102 402 171 HOH HOH . M 4 HOH A 103 403 152 HOH HOH . M 4 HOH A 104 404 175 HOH HOH . M 4 HOH A 105 405 148 HOH HOH . M 4 HOH A 106 406 90 HOH HOH . N 4 HOH B 1 301 200 HOH HOH . N 4 HOH B 2 302 191 HOH HOH . N 4 HOH B 3 303 26 HOH HOH . N 4 HOH B 4 304 177 HOH HOH . N 4 HOH B 5 305 63 HOH HOH . N 4 HOH B 6 306 100 HOH HOH . N 4 HOH B 7 307 77 HOH HOH . N 4 HOH B 8 308 181 HOH HOH . N 4 HOH B 9 309 178 HOH HOH . N 4 HOH B 10 310 150 HOH HOH . N 4 HOH B 11 311 62 HOH HOH . N 4 HOH B 12 312 159 HOH HOH . N 4 HOH B 13 313 174 HOH HOH . N 4 HOH B 14 314 153 HOH HOH . N 4 HOH B 15 315 83 HOH HOH . N 4 HOH B 16 316 46 HOH HOH . N 4 HOH B 17 317 36 HOH HOH . N 4 HOH B 18 318 14 HOH HOH . N 4 HOH B 19 319 102 HOH HOH . N 4 HOH B 20 320 30 HOH HOH . N 4 HOH B 21 321 69 HOH HOH . N 4 HOH B 22 322 49 HOH HOH . N 4 HOH B 23 323 196 HOH HOH . N 4 HOH B 24 324 44 HOH HOH . N 4 HOH B 25 325 33 HOH HOH . N 4 HOH B 26 326 187 HOH HOH . N 4 HOH B 27 327 34 HOH HOH . N 4 HOH B 28 328 105 HOH HOH . N 4 HOH B 29 329 116 HOH HOH . N 4 HOH B 30 330 78 HOH HOH . N 4 HOH B 31 331 184 HOH HOH . N 4 HOH B 32 332 132 HOH HOH . N 4 HOH B 33 333 72 HOH HOH . N 4 HOH B 34 334 106 HOH HOH . N 4 HOH B 35 335 176 HOH HOH . N 4 HOH B 36 336 140 HOH HOH . N 4 HOH B 37 337 89 HOH HOH . N 4 HOH B 38 338 186 HOH HOH . N 4 HOH B 39 339 194 HOH HOH . N 4 HOH B 40 340 79 HOH HOH . N 4 HOH B 41 341 161 HOH HOH . N 4 HOH B 42 342 88 HOH HOH . N 4 HOH B 43 343 28 HOH HOH . N 4 HOH B 44 344 43 HOH HOH . N 4 HOH B 45 345 42 HOH HOH . N 4 HOH B 46 346 6 HOH HOH . N 4 HOH B 47 347 48 HOH HOH . N 4 HOH B 48 348 19 HOH HOH . N 4 HOH B 49 349 173 HOH HOH . N 4 HOH B 50 350 86 HOH HOH . N 4 HOH B 51 351 64 HOH HOH . N 4 HOH B 52 352 9 HOH HOH . N 4 HOH B 53 353 107 HOH HOH . N 4 HOH B 54 354 67 HOH HOH . N 4 HOH B 55 355 20 HOH HOH . N 4 HOH B 56 356 85 HOH HOH . N 4 HOH B 57 357 142 HOH HOH . N 4 HOH B 58 358 162 HOH HOH . N 4 HOH B 59 359 147 HOH HOH . N 4 HOH B 60 360 57 HOH HOH . N 4 HOH B 61 361 60 HOH HOH . N 4 HOH B 62 362 185 HOH HOH . N 4 HOH B 63 363 96 HOH HOH . N 4 HOH B 64 364 65 HOH HOH . N 4 HOH B 65 365 24 HOH HOH . N 4 HOH B 66 366 115 HOH HOH . N 4 HOH B 67 367 81 HOH HOH . N 4 HOH B 68 368 84 HOH HOH . N 4 HOH B 69 369 183 HOH HOH . N 4 HOH B 70 370 101 HOH HOH . N 4 HOH B 71 371 139 HOH HOH . N 4 HOH B 72 372 149 HOH HOH . N 4 HOH B 73 373 190 HOH HOH . N 4 HOH B 74 374 95 HOH HOH . N 4 HOH B 75 375 98 HOH HOH . N 4 HOH B 76 376 127 HOH HOH . N 4 HOH B 77 377 151 HOH HOH . N 4 HOH B 78 378 201 HOH HOH . N 4 HOH B 79 379 40 HOH HOH . N 4 HOH B 80 380 133 HOH HOH . N 4 HOH B 81 381 134 HOH HOH . N 4 HOH B 82 382 155 HOH HOH . N 4 HOH B 83 383 157 HOH HOH . N 4 HOH B 84 384 170 HOH HOH . N 4 HOH B 85 385 114 HOH HOH . N 4 HOH B 86 386 202 HOH HOH . N 4 HOH B 87 387 160 HOH HOH . N 4 HOH B 88 388 110 HOH HOH . N 4 HOH B 89 389 129 HOH HOH . N 4 HOH B 90 390 97 HOH HOH . N 4 HOH B 91 391 103 HOH HOH . N 4 HOH B 92 392 193 HOH HOH . N 4 HOH B 93 393 156 HOH HOH . N 4 HOH B 94 394 131 HOH HOH . N 4 HOH B 95 395 182 HOH HOH . N 4 HOH B 96 396 180 HOH HOH . N 4 HOH B 97 397 195 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 20.799 88.671 44.131 0.26 18.88 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . D 2 21.39 88.885 45.374 0.26 19.57 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . D 2 21.623 87.672 43.4 0.26 21.51 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . D 2 22.291 88.387 42.399 0.26 24.07 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #