data_7KEV # _model_server_result.job_id G6riWVPqQWZGnRINt2vSIQ _model_server_result.datetime_utc '2025-04-22 21:03:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kev # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":801}' # _entry.id 7KEV # _exptl.entry_id 7KEV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KEV _cell.length_a 62.225 _cell.length_b 70.441 _cell.length_c 149.257 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KEV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 71 B CYS 223 1_555 B SG CYS 103 B CYS 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 B SG CYS 171 B CYS 323 1_555 B SG CYS 206 B CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf3 B SG CYS 223 B CYS 375 1_555 B SG CYS 226 B CYS 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? disulf ? disulf4 B SG CYS 305 B CYS 457 1_555 B SG CYS 375 B CYS 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf5 B SG CYS 325 B CYS 477 1_555 B SG CYS 374 B CYS 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf6 B SG CYS 334 B CYS 486 1_555 B SG CYS 357 B CYS 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf7 B SG CYS 382 B CYS 534 1_555 B SG CYS 449 B CYS 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf8 B SG CYS 400 B CYS 552 1_555 B SG CYS 448 B CYS 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.628 sing disulf ? disulf9 B SG CYS 410 B CYS 562 1_555 B SG CYS 436 B CYS 588 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? disulf ? disulf10 B SG CYS 456 B CYS 608 1_555 B SG CYS 527 B CYS 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf11 B SG CYS 474 B CYS 626 1_555 B SG CYS 526 B CYS 678 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf12 B SG CYS 483 B CYS 635 1_555 B SG CYS 502 B CYS 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 C C ACE 1 C ACE 1 1_555 C N PHE 2 C PHE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale2 C CH3 ACE 1 C ACE 1 1_555 C SG CYS 12 C CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.761 ? covale ? covale3 C C THR 5 C THR 5 1_555 C N ALO 6 C ALO 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale4 C C ALO 6 C ALO 6 1_555 C N5 WCM 7 C WCM 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale5 C C14 WCM 7 C WCM 7 1_555 C N5 WCM 8 C WCM 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale6 C C14 WCM 8 C WCM 8 1_555 C N ASP 9 C ASP 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale7 C C GLY 13 C GLY 13 1_555 C N NH2 14 C NH2 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? metalc ? metalc1 B O VAL 181 B VAL 333 1_555 D CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.051 ? metalc ? metalc2 B OD2 ASP 208 B ASP 360 1_555 D CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7KEV _atom_sites.fract_transf_matrix[1][1] 0.016071 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014196 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA B 1 801 801 CA CA . E 5 HOH A 1 201 201 HOH HOH . E 5 HOH A 2 202 202 HOH HOH . E 5 HOH A 3 203 203 HOH HOH . E 5 HOH A 4 204 204 HOH HOH . E 5 HOH A 5 205 205 HOH HOH . F 5 HOH B 1 901 901 HOH HOH . F 5 HOH B 2 902 902 HOH HOH . F 5 HOH B 3 903 903 HOH HOH . F 5 HOH B 4 904 904 HOH HOH . F 5 HOH B 5 905 905 HOH HOH . F 5 HOH B 6 906 906 HOH HOH . F 5 HOH B 7 907 907 HOH HOH . F 5 HOH B 8 908 908 HOH HOH . F 5 HOH B 9 909 909 HOH HOH . F 5 HOH B 10 910 910 HOH HOH . F 5 HOH B 11 911 911 HOH HOH . F 5 HOH B 12 912 912 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 64.89 _atom_site.Cartn_y 94.225 _atom_site.Cartn_z 174.758 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 79.71 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 801 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #