data_7KGO
#
_model_server_result.job_id            3FdjOpZtjvxIyjhHOrEm-Q 
_model_server_result.datetime_utc      '2024-12-11 23:04:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kgo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":101}' 
#
_entry.id    7KGO 
#
_exptl.entry_id    7KGO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (III) ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7KGO 
_cell.length_a            59.794 
_cell.length_b            78.254 
_cell.length_c            111.511 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7KGO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
disulf ? disulf3 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc1 A ND1 HIS 151 A HIS 151 1_555 H CD CD . A CD 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? 
metalc ? metalc2 A O HIS 191 A HIS 191 1_555 H CD CD . A CD 305 2_754 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? 
metalc ? metalc3 A ND1 HIS 191 A HIS 191 1_555 H CD CD . A CD 305 2_754 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
#
_chem_comp.formula           'Ni 3' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                3NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (III) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7KGO 
_atom_sites.fract_transf_matrix[1][1]    0.016724 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012779 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008968 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 3NI A 1 301 301 3NI 3NI . 
E 4 3NI A 1 302 304 3NI 3NI . 
F 5 CL A 1 303 2 CL CL . 
G 5 CL A 1 304 3 CL CL . 
H 6 CD A 1 305 1 CD CD . 
I 4 3NI B 1 101 101 3NI 3NI . 
J 5 CL B 1 102 1 CL CL . 
K 7 HOH A 1 401 214 HOH HOH . 
K 7 HOH A 2 402 45 HOH HOH . 
K 7 HOH A 3 403 64 HOH HOH . 
K 7 HOH A 4 404 31 HOH HOH . 
K 7 HOH A 5 405 126 HOH HOH . 
K 7 HOH A 6 406 50 HOH HOH . 
K 7 HOH A 7 407 58 HOH HOH . 
K 7 HOH A 8 408 46 HOH HOH . 
K 7 HOH A 9 409 19 HOH HOH . 
K 7 HOH A 10 410 10 HOH HOH . 
K 7 HOH A 11 411 1 HOH HOH . 
K 7 HOH A 12 412 23 HOH HOH . 
K 7 HOH A 13 413 113 HOH HOH . 
K 7 HOH A 14 414 181 HOH HOH . 
K 7 HOH A 15 415 60 HOH HOH . 
K 7 HOH A 16 416 55 HOH HOH . 
K 7 HOH A 17 417 20 HOH HOH . 
K 7 HOH A 18 418 54 HOH HOH . 
K 7 HOH A 19 419 33 HOH HOH . 
K 7 HOH A 20 420 82 HOH HOH . 
K 7 HOH A 21 421 69 HOH HOH . 
K 7 HOH A 22 422 99 HOH HOH . 
K 7 HOH A 23 423 40 HOH HOH . 
K 7 HOH A 24 424 6 HOH HOH . 
K 7 HOH A 25 425 67 HOH HOH . 
K 7 HOH A 26 426 188 HOH HOH . 
K 7 HOH A 27 427 13 HOH HOH . 
K 7 HOH A 28 428 47 HOH HOH . 
K 7 HOH A 29 429 74 HOH HOH . 
K 7 HOH A 30 430 111 HOH HOH . 
K 7 HOH A 31 431 105 HOH HOH . 
K 7 HOH A 32 432 24 HOH HOH . 
K 7 HOH A 33 433 112 HOH HOH . 
K 7 HOH A 34 434 17 HOH HOH . 
K 7 HOH A 35 435 107 HOH HOH . 
K 7 HOH A 36 436 44 HOH HOH . 
K 7 HOH A 37 437 131 HOH HOH . 
K 7 HOH A 38 438 16 HOH HOH . 
K 7 HOH A 39 439 38 HOH HOH . 
K 7 HOH A 40 440 81 HOH HOH . 
K 7 HOH A 41 441 114 HOH HOH . 
K 7 HOH A 42 442 103 HOH HOH . 
K 7 HOH A 43 443 94 HOH HOH . 
K 7 HOH A 44 444 70 HOH HOH . 
K 7 HOH A 45 445 127 HOH HOH . 
K 7 HOH A 46 446 78 HOH HOH . 
K 7 HOH A 47 447 48 HOH HOH . 
K 7 HOH A 48 448 3 HOH HOH . 
K 7 HOH A 49 449 124 HOH HOH . 
K 7 HOH A 50 450 136 HOH HOH . 
K 7 HOH A 51 451 15 HOH HOH . 
K 7 HOH A 52 452 35 HOH HOH . 
K 7 HOH A 53 453 21 HOH HOH . 
K 7 HOH A 54 454 132 HOH HOH . 
K 7 HOH A 55 455 169 HOH HOH . 
K 7 HOH A 56 456 80 HOH HOH . 
K 7 HOH A 57 457 128 HOH HOH . 
K 7 HOH A 58 458 119 HOH HOH . 
K 7 HOH A 59 459 49 HOH HOH . 
K 7 HOH A 60 460 61 HOH HOH . 
K 7 HOH A 61 461 141 HOH HOH . 
K 7 HOH A 62 462 22 HOH HOH . 
K 7 HOH A 63 463 156 HOH HOH . 
K 7 HOH A 64 464 206 HOH HOH . 
K 7 HOH A 65 465 143 HOH HOH . 
K 7 HOH A 66 466 138 HOH HOH . 
K 7 HOH A 67 467 32 HOH HOH . 
K 7 HOH A 68 468 7 HOH HOH . 
K 7 HOH A 69 469 133 HOH HOH . 
K 7 HOH A 70 470 135 HOH HOH . 
K 7 HOH A 71 471 200 HOH HOH . 
K 7 HOH A 72 472 25 HOH HOH . 
K 7 HOH A 73 473 173 HOH HOH . 
K 7 HOH A 74 474 152 HOH HOH . 
K 7 HOH A 75 475 147 HOH HOH . 
K 7 HOH A 76 476 93 HOH HOH . 
K 7 HOH A 77 477 145 HOH HOH . 
K 7 HOH A 78 478 86 HOH HOH . 
K 7 HOH A 79 479 68 HOH HOH . 
K 7 HOH A 80 480 18 HOH HOH . 
K 7 HOH A 81 481 110 HOH HOH . 
K 7 HOH A 82 482 149 HOH HOH . 
K 7 HOH A 83 483 159 HOH HOH . 
K 7 HOH A 84 484 130 HOH HOH . 
K 7 HOH A 85 485 102 HOH HOH . 
K 7 HOH A 86 486 168 HOH HOH . 
K 7 HOH A 87 487 77 HOH HOH . 
K 7 HOH A 88 488 150 HOH HOH . 
K 7 HOH A 89 489 190 HOH HOH . 
K 7 HOH A 90 490 167 HOH HOH . 
K 7 HOH A 91 491 117 HOH HOH . 
K 7 HOH A 92 492 189 HOH HOH . 
K 7 HOH A 93 493 115 HOH HOH . 
K 7 HOH A 94 494 2 HOH HOH . 
K 7 HOH A 95 495 191 HOH HOH . 
K 7 HOH A 96 496 129 HOH HOH . 
K 7 HOH A 97 497 162 HOH HOH . 
K 7 HOH A 98 498 27 HOH HOH . 
K 7 HOH A 99 499 157 HOH HOH . 
K 7 HOH A 100 500 92 HOH HOH . 
K 7 HOH A 101 501 97 HOH HOH . 
K 7 HOH A 102 502 134 HOH HOH . 
K 7 HOH A 103 503 104 HOH HOH . 
K 7 HOH A 104 504 53 HOH HOH . 
K 7 HOH A 105 505 116 HOH HOH . 
K 7 HOH A 106 506 121 HOH HOH . 
K 7 HOH A 107 507 11 HOH HOH . 
K 7 HOH A 108 508 125 HOH HOH . 
K 7 HOH A 109 509 4 HOH HOH . 
K 7 HOH A 110 510 84 HOH HOH . 
K 7 HOH A 111 511 59 HOH HOH . 
K 7 HOH A 112 512 100 HOH HOH . 
K 7 HOH A 113 513 72 HOH HOH . 
K 7 HOH A 114 514 96 HOH HOH . 
K 7 HOH A 115 515 109 HOH HOH . 
K 7 HOH A 116 516 170 HOH HOH . 
K 7 HOH A 117 517 175 HOH HOH . 
K 7 HOH A 118 518 180 HOH HOH . 
K 7 HOH A 119 519 89 HOH HOH . 
K 7 HOH A 120 520 179 HOH HOH . 
K 7 HOH A 121 521 186 HOH HOH . 
K 7 HOH A 122 522 75 HOH HOH . 
K 7 HOH A 123 523 164 HOH HOH . 
K 7 HOH A 124 524 209 HOH HOH . 
K 7 HOH A 125 525 212 HOH HOH . 
K 7 HOH A 126 526 211 HOH HOH . 
K 7 HOH A 127 527 213 HOH HOH . 
L 7 HOH B 1 201 42 HOH HOH . 
L 7 HOH B 2 202 182 HOH HOH . 
L 7 HOH B 3 203 177 HOH HOH . 
L 7 HOH B 4 204 28 HOH HOH . 
L 7 HOH B 5 205 34 HOH HOH . 
L 7 HOH B 6 206 51 HOH HOH . 
L 7 HOH B 7 207 63 HOH HOH . 
L 7 HOH B 8 208 12 HOH HOH . 
L 7 HOH B 9 209 9 HOH HOH . 
L 7 HOH B 10 210 197 HOH HOH . 
L 7 HOH B 11 211 101 HOH HOH . 
L 7 HOH B 12 212 8 HOH HOH . 
L 7 HOH B 13 213 71 HOH HOH . 
L 7 HOH B 14 214 205 HOH HOH . 
L 7 HOH B 15 215 118 HOH HOH . 
L 7 HOH B 16 216 140 HOH HOH . 
L 7 HOH B 17 217 95 HOH HOH . 
L 7 HOH B 18 218 137 HOH HOH . 
L 7 HOH B 19 219 85 HOH HOH . 
L 7 HOH B 20 220 36 HOH HOH . 
L 7 HOH B 21 221 37 HOH HOH . 
L 7 HOH B 22 222 91 HOH HOH . 
L 7 HOH B 23 223 172 HOH HOH . 
L 7 HOH B 24 224 73 HOH HOH . 
L 7 HOH B 25 225 43 HOH HOH . 
L 7 HOH B 26 226 65 HOH HOH . 
L 7 HOH B 27 227 76 HOH HOH . 
L 7 HOH B 28 228 198 HOH HOH . 
L 7 HOH B 29 229 52 HOH HOH . 
L 7 HOH B 30 230 193 HOH HOH . 
L 7 HOH B 31 231 90 HOH HOH . 
L 7 HOH B 32 232 88 HOH HOH . 
L 7 HOH B 33 233 5 HOH HOH . 
L 7 HOH B 34 234 66 HOH HOH . 
L 7 HOH B 35 235 56 HOH HOH . 
L 7 HOH B 36 236 176 HOH HOH . 
L 7 HOH B 37 237 41 HOH HOH . 
L 7 HOH B 38 238 79 HOH HOH . 
L 7 HOH B 39 239 14 HOH HOH . 
L 7 HOH B 40 240 108 HOH HOH . 
L 7 HOH B 41 241 142 HOH HOH . 
L 7 HOH B 42 242 106 HOH HOH . 
L 7 HOH B 43 243 62 HOH HOH . 
L 7 HOH B 44 244 139 HOH HOH . 
L 7 HOH B 45 245 203 HOH HOH . 
L 7 HOH B 46 246 166 HOH HOH . 
L 7 HOH B 47 247 26 HOH HOH . 
L 7 HOH B 48 248 154 HOH HOH . 
L 7 HOH B 49 249 202 HOH HOH . 
L 7 HOH B 50 250 196 HOH HOH . 
L 7 HOH B 51 251 155 HOH HOH . 
L 7 HOH B 52 252 146 HOH HOH . 
L 7 HOH B 53 253 201 HOH HOH . 
L 7 HOH B 54 254 185 HOH HOH . 
L 7 HOH B 55 255 178 HOH HOH . 
L 7 HOH B 56 256 210 HOH HOH . 
M 7 HOH C 1 101 39 HOH HOH . 
M 7 HOH C 2 102 57 HOH HOH . 
M 7 HOH C 3 103 30 HOH HOH . 
M 7 HOH C 4 104 29 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         3NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               67.628 
_atom_site.Cartn_y               4.549 
_atom_site.Cartn_z               3.813 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        49.33 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          3NI 
_atom_site.auth_seq_id           101 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              75 
_model_server_stats.parse_time_ms           39 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#