data_7KGW # _model_server_result.job_id QI7FQ76bInL5YvxQfg-NOQ _model_server_result.datetime_utc '2024-11-14 23:02:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kgw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 7KGW # _exptl.entry_id 7KGW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 303.318 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-(1H-pyrazol-3-yl)phenyl]-1H-indazole-7-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7KGW _cell.length_a 60.712 _cell.length_b 60.712 _cell.length_c 146.205 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KGW _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 72 A HIS 69 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc2 A ND1 HIS 74 A HIS 71 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc3 A OD2 ASP 76 A ASP 73 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc4 A NE2 HIS 77 A HIS 74 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc5 A NE2 HIS 162 A HIS 159 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc6 A OD2 ASP 181 A ASP 178 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc7 A OD2 ASP 181 A ASP 178 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc8 A NE2 HIS 224 A HIS 221 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc9 B FE FE . A FE 501 1_555 E O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc10 B FE FE . A FE 501 1_555 E O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc11 C FE FE . A FE 502 1_555 D N4 WDY . A WDY 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc12 C FE FE . A FE 502 1_555 E O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? # _chem_comp.formula 'C17 H13 N5 O' _chem_comp.formula_weight 303.318 _chem_comp.id WDY _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-(1H-pyrazol-3-yl)phenyl]-1H-indazole-7-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C12 WDY doub 376 n y C13 C14 WDY sing 377 n y C16 C14 WDY sing 378 n y C16 N4 WDY doub 379 n y C12 C11 WDY sing 380 n y C14 C15 WDY doub 381 n y N4 N3 WDY sing 382 n y C11 C10 WDY doub 383 n y C15 N3 WDY sing 384 n y C15 C10 WDY sing 385 n y C10 C WDY sing 386 n n C O WDY doub 387 n n C N WDY sing 388 n n N C1 WDY sing 389 n n C1 C9 WDY doub 390 n y C1 C2 WDY sing 391 n y C9 C8 WDY sing 392 n y C2 C3 WDY doub 393 n y C8 C7 WDY doub 394 n y C3 C7 WDY sing 395 n y C3 C4 WDY sing 396 n n N2 C4 WDY doub 397 n y N2 N1 WDY sing 398 n y C4 C5 WDY sing 399 n y N1 C6 WDY sing 400 n y C5 C6 WDY doub 401 n y N1 H1 WDY sing 402 n n N3 H2 WDY sing 403 n n C5 H3 WDY sing 404 n n C6 H4 WDY sing 405 n n C7 H5 WDY sing 406 n n C8 H6 WDY sing 407 n n C13 H7 WDY sing 408 n n N H8 WDY sing 409 n n C11 H9 WDY sing 410 n n C12 H10 WDY sing 411 n n C16 H11 WDY sing 412 n n C2 H12 WDY sing 413 n n C9 H13 WDY sing 414 n n # _atom_sites.entry_id 7KGW _atom_sites.fract_transf_matrix[1][1] 0.016471 _atom_sites.fract_transf_matrix[1][2] 0.00951 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019019 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 501 501 FE FE . C 2 FE A 1 502 502 FE FE . D 3 WDY A 1 503 601 WDY LIG . E 4 HOH A 1 601 101 HOH HOH . E 4 HOH A 2 602 93 HOH HOH . E 4 HOH A 3 603 163 HOH HOH . E 4 HOH A 4 604 20 HOH HOH . E 4 HOH A 5 605 30 HOH HOH . E 4 HOH A 6 606 99 HOH HOH . E 4 HOH A 7 607 125 HOH HOH . E 4 HOH A 8 608 169 HOH HOH . E 4 HOH A 9 609 84 HOH HOH . E 4 HOH A 10 610 108 HOH HOH . E 4 HOH A 11 611 37 HOH HOH . E 4 HOH A 12 612 45 HOH HOH . E 4 HOH A 13 613 5 HOH HOH . E 4 HOH A 14 614 40 HOH HOH . E 4 HOH A 15 615 69 HOH HOH . E 4 HOH A 16 616 98 HOH HOH . E 4 HOH A 17 617 52 HOH HOH . E 4 HOH A 18 618 21 HOH HOH . E 4 HOH A 19 619 2 HOH HOH . E 4 HOH A 20 620 36 HOH HOH . E 4 HOH A 21 621 105 HOH HOH . E 4 HOH A 22 622 151 HOH HOH . E 4 HOH A 23 623 72 HOH HOH . E 4 HOH A 24 624 1 HOH HOH . E 4 HOH A 25 625 154 HOH HOH . E 4 HOH A 26 626 17 HOH HOH . E 4 HOH A 27 627 58 HOH HOH . E 4 HOH A 28 628 24 HOH HOH . E 4 HOH A 29 629 44 HOH HOH . E 4 HOH A 30 630 86 HOH HOH . E 4 HOH A 31 631 14 HOH HOH . E 4 HOH A 32 632 62 HOH HOH . E 4 HOH A 33 633 137 HOH HOH . E 4 HOH A 34 634 18 HOH HOH . E 4 HOH A 35 635 32 HOH HOH . E 4 HOH A 36 636 117 HOH HOH . E 4 HOH A 37 637 97 HOH HOH . E 4 HOH A 38 638 79 HOH HOH . E 4 HOH A 39 639 94 HOH HOH . E 4 HOH A 40 640 73 HOH HOH . E 4 HOH A 41 641 54 HOH HOH . E 4 HOH A 42 642 49 HOH HOH . E 4 HOH A 43 643 136 HOH HOH . E 4 HOH A 44 644 90 HOH HOH . E 4 HOH A 45 645 68 HOH HOH . E 4 HOH A 46 646 113 HOH HOH . E 4 HOH A 47 647 158 HOH HOH . E 4 HOH A 48 648 76 HOH HOH . E 4 HOH A 49 649 149 HOH HOH . E 4 HOH A 50 650 85 HOH HOH . E 4 HOH A 51 651 13 HOH HOH . E 4 HOH A 52 652 83 HOH HOH . E 4 HOH A 53 653 126 HOH HOH . E 4 HOH A 54 654 10 HOH HOH . E 4 HOH A 55 655 57 HOH HOH . E 4 HOH A 56 656 80 HOH HOH . E 4 HOH A 57 657 6 HOH HOH . E 4 HOH A 58 658 127 HOH HOH . E 4 HOH A 59 659 71 HOH HOH . E 4 HOH A 60 660 48 HOH HOH . E 4 HOH A 61 661 11 HOH HOH . E 4 HOH A 62 662 87 HOH HOH . E 4 HOH A 63 663 60 HOH HOH . E 4 HOH A 64 664 128 HOH HOH . E 4 HOH A 65 665 145 HOH HOH . E 4 HOH A 66 666 4 HOH HOH . E 4 HOH A 67 667 96 HOH HOH . E 4 HOH A 68 668 110 HOH HOH . E 4 HOH A 69 669 19 HOH HOH . E 4 HOH A 70 670 156 HOH HOH . E 4 HOH A 71 671 67 HOH HOH . E 4 HOH A 72 672 9 HOH HOH . E 4 HOH A 73 673 12 HOH HOH . E 4 HOH A 74 674 29 HOH HOH . E 4 HOH A 75 675 55 HOH HOH . E 4 HOH A 76 676 75 HOH HOH . E 4 HOH A 77 677 144 HOH HOH . E 4 HOH A 78 678 132 HOH HOH . E 4 HOH A 79 679 81 HOH HOH . E 4 HOH A 80 680 59 HOH HOH . E 4 HOH A 81 681 112 HOH HOH . E 4 HOH A 82 682 106 HOH HOH . E 4 HOH A 83 683 61 HOH HOH . E 4 HOH A 84 684 41 HOH HOH . E 4 HOH A 85 685 7 HOH HOH . E 4 HOH A 86 686 167 HOH HOH . E 4 HOH A 87 687 39 HOH HOH . E 4 HOH A 88 688 63 HOH HOH . E 4 HOH A 89 689 118 HOH HOH . E 4 HOH A 90 690 92 HOH HOH . E 4 HOH A 91 691 66 HOH HOH . E 4 HOH A 92 692 27 HOH HOH . E 4 HOH A 93 693 3 HOH HOH . E 4 HOH A 94 694 28 HOH HOH . E 4 HOH A 95 695 155 HOH HOH . E 4 HOH A 96 696 102 HOH HOH . E 4 HOH A 97 697 119 HOH HOH . E 4 HOH A 98 698 116 HOH HOH . E 4 HOH A 99 699 56 HOH HOH . E 4 HOH A 100 700 22 HOH HOH . E 4 HOH A 101 701 135 HOH HOH . E 4 HOH A 102 702 152 HOH HOH . E 4 HOH A 103 703 38 HOH HOH . E 4 HOH A 104 704 77 HOH HOH . E 4 HOH A 105 705 150 HOH HOH . E 4 HOH A 106 706 50 HOH HOH . E 4 HOH A 107 707 88 HOH HOH . E 4 HOH A 108 708 70 HOH HOH . E 4 HOH A 109 709 33 HOH HOH . E 4 HOH A 110 710 103 HOH HOH . E 4 HOH A 111 711 139 HOH HOH . E 4 HOH A 112 712 147 HOH HOH . E 4 HOH A 113 713 107 HOH HOH . E 4 HOH A 114 714 104 HOH HOH . E 4 HOH A 115 715 65 HOH HOH . E 4 HOH A 116 716 160 HOH HOH . E 4 HOH A 117 717 140 HOH HOH . E 4 HOH A 118 718 162 HOH HOH . E 4 HOH A 119 719 142 HOH HOH . E 4 HOH A 120 720 82 HOH HOH . E 4 HOH A 121 721 115 HOH HOH . E 4 HOH A 122 722 26 HOH HOH . E 4 HOH A 123 723 46 HOH HOH . E 4 HOH A 124 724 8 HOH HOH . E 4 HOH A 125 725 34 HOH HOH . E 4 HOH A 126 726 31 HOH HOH . E 4 HOH A 127 727 35 HOH HOH . E 4 HOH A 128 728 16 HOH HOH . E 4 HOH A 129 729 23 HOH HOH . E 4 HOH A 130 730 43 HOH HOH . E 4 HOH A 131 731 141 HOH HOH . E 4 HOH A 132 732 74 HOH HOH . E 4 HOH A 133 733 124 HOH HOH . E 4 HOH A 134 734 64 HOH HOH . E 4 HOH A 135 735 121 HOH HOH . E 4 HOH A 136 736 129 HOH HOH . E 4 HOH A 137 737 53 HOH HOH . E 4 HOH A 138 738 100 HOH HOH . E 4 HOH A 139 739 164 HOH HOH . E 4 HOH A 140 740 166 HOH HOH . E 4 HOH A 141 741 146 HOH HOH . E 4 HOH A 142 742 25 HOH HOH . E 4 HOH A 143 743 15 HOH HOH . E 4 HOH A 144 744 148 HOH HOH . E 4 HOH A 145 745 78 HOH HOH . E 4 HOH A 146 746 120 HOH HOH . E 4 HOH A 147 747 143 HOH HOH . E 4 HOH A 148 748 47 HOH HOH . E 4 HOH A 149 749 111 HOH HOH . E 4 HOH A 150 750 91 HOH HOH . E 4 HOH A 151 751 159 HOH HOH . E 4 HOH A 152 752 157 HOH HOH . E 4 HOH A 153 753 51 HOH HOH . E 4 HOH A 154 754 131 HOH HOH . E 4 HOH A 155 755 161 HOH HOH . E 4 HOH A 156 756 114 HOH HOH . E 4 HOH A 157 757 109 HOH HOH . E 4 HOH A 158 758 130 HOH HOH . E 4 HOH A 159 759 89 HOH HOH . E 4 HOH A 160 760 95 HOH HOH . E 4 HOH A 161 761 168 HOH HOH . E 4 HOH A 162 762 123 HOH HOH . E 4 HOH A 163 763 165 HOH HOH . E 4 HOH A 164 764 133 HOH HOH . E 4 HOH A 165 765 42 HOH HOH . E 4 HOH A 166 766 138 HOH HOH . E 4 HOH A 167 767 122 HOH HOH . E 4 HOH A 168 768 134 HOH HOH . E 4 HOH A 169 769 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 WDY . . . D 3 -13.77 3.678 -4.233 0.81 76.58 ? N1 WDY 503 A 1 HETATM 2 N N3 WDY . . . D 3 -18.05 0.931 -11.661 0.81 38.05 ? N3 WDY 503 A 1 HETATM 3 C C4 WDY . . . D 3 -15.631 2.632 -4.914 0.81 71.43 ? C4 WDY 503 A 1 HETATM 4 C C5 WDY . . . D 3 -15.19 2.002 -3.764 0.81 72.36 ? C5 WDY 503 A 1 HETATM 5 C C6 WDY . . . D 3 -14.037 2.69 -3.389 0.81 74.86 ? C6 WDY 503 A 1 HETATM 6 C C7 WDY . . . D 3 -17.979 1.863 -5.229 0.81 66.19 ? C7 WDY 503 A 1 HETATM 7 C C8 WDY . . . D 3 -19.067 1.606 -6.047 0.81 64.64 ? C8 WDY 503 A 1 HETATM 8 C C10 WDY . . . D 3 -16.872 3.161 -11.53 0.81 54.89 ? C10 WDY 503 A 1 HETATM 9 C C13 WDY . . . D 3 -16.97 2.98 -14.329 0.81 49.99 ? C13 WDY 503 A 1 HETATM 10 C C15 WDY . . . D 3 -17.467 2.05 -12.152 0.81 45.43 ? C15 WDY 503 A 1 HETATM 11 N N WDY . . . D 3 -17.676 2.454 -9.368 0.81 62.1 ? N WDY 503 A 1 HETATM 12 C C WDY . . . D 3 -16.907 3.34 -10.046 0.81 60.98 ? C WDY 503 A 1 HETATM 13 O O WDY . . . D 3 -16.273 4.243 -9.512 0.81 65.07 ? O WDY 503 A 1 HETATM 14 C C1 WDY . . . D 3 -17.795 2.294 -7.966 0.81 64.55 ? C1 WDY 503 A 1 HETATM 15 C C11 WDY . . . D 3 -16.302 4.152 -12.332 0.81 53.32 ? C11 WDY 503 A 1 HETATM 16 C C12 WDY . . . D 3 -16.354 4.06 -13.716 0.81 49.37 ? C12 WDY 503 A 1 HETATM 17 C C14 WDY . . . D 3 -17.529 1.958 -13.556 0.81 42.81 ? C14 WDY 503 A 1 HETATM 18 C C16 WDY . . . D 3 -18.189 0.726 -13.793 0.81 38.77 ? C16 WDY 503 A 1 HETATM 19 C C2 WDY . . . D 3 -16.706 2.558 -7.142 0.81 63.82 ? C2 WDY 503 A 1 HETATM 20 C C3 WDY . . . D 3 -16.791 2.342 -5.771 0.81 67.16 ? C3 WDY 503 A 1 HETATM 21 C C9 WDY . . . D 3 -18.981 1.821 -7.414 0.81 61.49 ? C9 WDY 503 A 1 HETATM 22 N N2 WDY . . . D 3 -14.759 3.632 -5.168 0.81 74.16 ? N2 WDY 503 A 1 HETATM 23 N N4 WDY . . . D 3 -18.496 0.117 -12.663 0.81 28.92 ? N4 WDY 503 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #