data_7KGX
#
_model_server_result.job_id            LsgEZ7HmBM6v5FMsViRhbQ 
_model_server_result.datetime_utc      '2024-11-14 17:14:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kgx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    7KGX 
#
_exptl.entry_id    7KGX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              417.525 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-({[(2R)-2-methyl-2-(morpholin-4-yl)butyl]carbamoyl}amino)-N-(1,3-thiazol-2-yl)benzamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7KGX 
_cell.length_a            60.885 
_cell.length_b            60.885 
_cell.length_c            146.601 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7KGX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    'P 32 2"' 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 72 A HIS 69 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc2 A ND1 HIS 74 A HIS 71 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc3 A OD2 ASP 76 A ASP 73 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? 
metalc ? metalc4 A NE2 HIS 77 A HIS 74 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc5 A NE2 HIS 162 A HIS 159 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc6 A OD2 ASP 181 A ASP 178 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc7 A OD2 ASP 181 A ASP 178 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? 
metalc ? metalc8 A NE2 HIS 224 A HIS 221 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc9 B FE FE . A FE 501 1_555 E O HOH . A HOH 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? 
metalc ? metalc10 B FE FE . A FE 501 1_555 E O HOH . A HOH 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc11 C FE FE . A FE 502 1_555 E O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc12 C FE FE . A FE 502 1_555 E O HOH . A HOH 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
#
_chem_comp.formula           'C20 H27 N5 O3 S' 
_chem_comp.formula_weight    417.525 
_chem_comp.id                WE1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-({[(2R)-2-methyl-2-(morpholin-4-yl)butyl]carbamoyl}amino)-N-(1,3-thiazol-2-yl)benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C3 WE1 doub 376 n y 
C2 N1 WE1 sing 377 n y 
C3 S WE1 sing 378 n y 
N1 C1 WE1 doub 379 n y 
S C1 WE1 sing 380 n y 
C1 N WE1 sing 381 n n 
N C WE1 sing 382 n n 
O C WE1 doub 383 n n 
C C4 WE1 sing 384 n n 
C4 C5 WE1 doub 385 n y 
C4 C19 WE1 sing 386 n y 
C5 C6 WE1 sing 387 n y 
C19 C18 WE1 doub 388 n y 
C6 C7 WE1 doub 389 n y 
C18 C7 WE1 sing 390 n y 
C7 N2 WE1 sing 391 n n 
O2 C8 WE1 doub 392 n n 
N2 C8 WE1 sing 393 n n 
C8 N3 WE1 sing 394 n n 
N3 C9 WE1 sing 395 n n 
C9 C10 WE1 sing 396 n n 
C13 C12 WE1 sing 397 n n 
C10 C11 WE1 sing 398 n n 
C10 C12 WE1 sing 399 n n 
C10 N4 WE1 sing 400 n n 
C17 N4 WE1 sing 401 n n 
C17 C16 WE1 sing 402 n n 
N4 C14 WE1 sing 403 n n 
C16 O1 WE1 sing 404 n n 
C14 C15 WE1 sing 405 n n 
O1 C15 WE1 sing 406 n n 
N3 H1 WE1 sing 407 n n 
C5 H2 WE1 sing 408 n n 
C6 H3 WE1 sing 409 n n 
C13 H4 WE1 sing 410 n n 
C13 H5 WE1 sing 411 n n 
C13 H6 WE1 sing 412 n n 
C15 H7 WE1 sing 413 n n 
C15 H8 WE1 sing 414 n n 
C17 H9 WE1 sing 415 n n 
C17 H10 WE1 sing 416 n n 
N H11 WE1 sing 417 n n 
C11 H12 WE1 sing 418 n n 
C11 H13 WE1 sing 419 n n 
C11 H14 WE1 sing 420 n n 
C12 H15 WE1 sing 421 n n 
C12 H16 WE1 sing 422 n n 
C14 H17 WE1 sing 423 n n 
C14 H18 WE1 sing 424 n n 
C16 H19 WE1 sing 425 n n 
C16 H20 WE1 sing 426 n n 
C18 H21 WE1 sing 427 n n 
C19 H22 WE1 sing 428 n n 
C2 H23 WE1 sing 429 n n 
C3 H24 WE1 sing 430 n n 
C9 H25 WE1 sing 431 n n 
C9 H26 WE1 sing 432 n n 
N2 H27 WE1 sing 433 n n 
#
_atom_sites.entry_id                     7KGX 
_atom_sites.fract_transf_matrix[1][1]    0.016424 
_atom_sites.fract_transf_matrix[1][2]    0.009483 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018965 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006821 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FE A 1 501 501 FE FE . 
C 2 FE A 1 502 502 FE FE . 
D 3 WE1 A 1 503 601 WE1 LIG . 
E 4 HOH A 1 601 3 HOH HOH . 
E 4 HOH A 2 602 51 HOH HOH . 
E 4 HOH A 3 603 92 HOH HOH . 
E 4 HOH A 4 604 22 HOH HOH . 
E 4 HOH A 5 605 98 HOH HOH . 
E 4 HOH A 6 606 39 HOH HOH . 
E 4 HOH A 7 607 16 HOH HOH . 
E 4 HOH A 8 608 86 HOH HOH . 
E 4 HOH A 9 609 28 HOH HOH . 
E 4 HOH A 10 610 34 HOH HOH . 
E 4 HOH A 11 611 46 HOH HOH . 
E 4 HOH A 12 612 82 HOH HOH . 
E 4 HOH A 13 613 11 HOH HOH . 
E 4 HOH A 14 614 83 HOH HOH . 
E 4 HOH A 15 615 87 HOH HOH . 
E 4 HOH A 16 616 31 HOH HOH . 
E 4 HOH A 17 617 61 HOH HOH . 
E 4 HOH A 18 618 25 HOH HOH . 
E 4 HOH A 19 619 5 HOH HOH . 
E 4 HOH A 20 620 19 HOH HOH . 
E 4 HOH A 21 621 94 HOH HOH . 
E 4 HOH A 22 622 45 HOH HOH . 
E 4 HOH A 23 623 64 HOH HOH . 
E 4 HOH A 24 624 18 HOH HOH . 
E 4 HOH A 25 625 7 HOH HOH . 
E 4 HOH A 26 626 60 HOH HOH . 
E 4 HOH A 27 627 53 HOH HOH . 
E 4 HOH A 28 628 41 HOH HOH . 
E 4 HOH A 29 629 8 HOH HOH . 
E 4 HOH A 30 630 59 HOH HOH . 
E 4 HOH A 31 631 10 HOH HOH . 
E 4 HOH A 32 632 70 HOH HOH . 
E 4 HOH A 33 633 42 HOH HOH . 
E 4 HOH A 34 634 30 HOH HOH . 
E 4 HOH A 35 635 48 HOH HOH . 
E 4 HOH A 36 636 85 HOH HOH . 
E 4 HOH A 37 637 13 HOH HOH . 
E 4 HOH A 38 638 65 HOH HOH . 
E 4 HOH A 39 639 95 HOH HOH . 
E 4 HOH A 40 640 35 HOH HOH . 
E 4 HOH A 41 641 1 HOH HOH . 
E 4 HOH A 42 642 27 HOH HOH . 
E 4 HOH A 43 643 21 HOH HOH . 
E 4 HOH A 44 644 4 HOH HOH . 
E 4 HOH A 45 645 75 HOH HOH . 
E 4 HOH A 46 646 29 HOH HOH . 
E 4 HOH A 47 647 99 HOH HOH . 
E 4 HOH A 48 648 44 HOH HOH . 
E 4 HOH A 49 649 62 HOH HOH . 
E 4 HOH A 50 650 14 HOH HOH . 
E 4 HOH A 51 651 102 HOH HOH . 
E 4 HOH A 52 652 20 HOH HOH . 
E 4 HOH A 53 653 15 HOH HOH . 
E 4 HOH A 54 654 68 HOH HOH . 
E 4 HOH A 55 655 6 HOH HOH . 
E 4 HOH A 56 656 58 HOH HOH . 
E 4 HOH A 57 657 36 HOH HOH . 
E 4 HOH A 58 658 52 HOH HOH . 
E 4 HOH A 59 659 12 HOH HOH . 
E 4 HOH A 60 660 88 HOH HOH . 
E 4 HOH A 61 661 32 HOH HOH . 
E 4 HOH A 62 662 56 HOH HOH . 
E 4 HOH A 63 663 47 HOH HOH . 
E 4 HOH A 64 664 80 HOH HOH . 
E 4 HOH A 65 665 73 HOH HOH . 
E 4 HOH A 66 666 74 HOH HOH . 
E 4 HOH A 67 667 9 HOH HOH . 
E 4 HOH A 68 668 66 HOH HOH . 
E 4 HOH A 69 669 57 HOH HOH . 
E 4 HOH A 70 670 96 HOH HOH . 
E 4 HOH A 71 671 2 HOH HOH . 
E 4 HOH A 72 672 63 HOH HOH . 
E 4 HOH A 73 673 23 HOH HOH . 
E 4 HOH A 74 674 93 HOH HOH . 
E 4 HOH A 75 675 43 HOH HOH . 
E 4 HOH A 76 676 17 HOH HOH . 
E 4 HOH A 77 677 55 HOH HOH . 
E 4 HOH A 78 678 90 HOH HOH . 
E 4 HOH A 79 679 72 HOH HOH . 
E 4 HOH A 80 680 24 HOH HOH . 
E 4 HOH A 81 681 38 HOH HOH . 
E 4 HOH A 82 682 50 HOH HOH . 
E 4 HOH A 83 683 33 HOH HOH . 
E 4 HOH A 84 684 69 HOH HOH . 
E 4 HOH A 85 685 78 HOH HOH . 
E 4 HOH A 86 686 84 HOH HOH . 
E 4 HOH A 87 687 26 HOH HOH . 
E 4 HOH A 88 688 101 HOH HOH . 
E 4 HOH A 89 689 97 HOH HOH . 
E 4 HOH A 90 690 49 HOH HOH . 
E 4 HOH A 91 691 40 HOH HOH . 
E 4 HOH A 92 692 91 HOH HOH . 
E 4 HOH A 93 693 77 HOH HOH . 
E 4 HOH A 94 694 37 HOH HOH . 
E 4 HOH A 95 695 79 HOH HOH . 
E 4 HOH A 96 696 54 HOH HOH . 
E 4 HOH A 97 697 71 HOH HOH . 
E 4 HOH A 98 698 67 HOH HOH . 
E 4 HOH A 99 699 76 HOH HOH . 
E 4 HOH A 100 700 89 HOH HOH . 
E 4 HOH A 101 701 100 HOH HOH . 
E 4 HOH A 102 702 81 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 WE1 . . . D 3 -17.975 2.322 -12.98 0.82 54.99 ? N1 WE1 503 A 1 
HETATM 2 N N3 WE1 . . . D 3 -19.898 0.89 -2.571 0.82 78.76 ? N3 WE1 503 A 1 
HETATM 3 C C4 WE1 . . . D 3 -18.032 3.029 -8.26 0.82 60.88 ? C4 WE1 503 A 1 
HETATM 4 C C5 WE1 . . . D 3 -18.763 1.867 -8.028 0.82 54.74 ? C5 WE1 503 A 1 
HETATM 5 C C6 WE1 . . . D 3 -19.27 1.588 -6.77 0.82 57.65 ? C6 WE1 503 A 1 
HETATM 6 C C7 WE1 . . . D 3 -19.054 2.469 -5.713 0.82 66 ? C7 WE1 503 A 1 
HETATM 7 C C8 WE1 . . . D 3 -20.142 1.138 -3.877 0.82 63.92 ? C8 WE1 503 A 1 
HETATM 8 C C10 WE1 . . . D 3 -20.492 -0.543 -0.548 0.82 78.68 ? C10 WE1 503 A 1 
HETATM 9 C C13 WE1 . . . D 3 -21.815 -2.752 -0.642 0.82 72.13 ? C13 WE1 503 A 1 
HETATM 10 C C15 WE1 . . . D 3 -19.111 1.879 1.993 0.82 71.29 ? C15 WE1 503 A 1 
HETATM 11 C C17 WE1 . . . D 3 -18.117 0.147 -0.121 0.82 80.13 ? C17 WE1 503 A 1 
HETATM 12 N N WE1 . . . D 3 -17.829 2.675 -10.676 0.82 58.75 ? N WE1 503 A 1 
HETATM 13 C C WE1 . . . D 3 -17.398 3.376 -9.572 0.82 59.54 ? C WE1 503 A 1 
HETATM 14 O O WE1 . . . D 3 -16.548 4.258 -9.645 0.82 55.99 ? O WE1 503 A 1 
HETATM 15 C C1 WE1 . . . D 3 -17.386 2.901 -11.966 0.82 58.3 ? C1 WE1 503 A 1 
HETATM 16 C C11 WE1 . . . D 3 -21.867 0.082 -0.377 0.82 82.29 ? C11 WE1 503 A 1 
HETATM 17 C C12 WE1 . . . D 3 -20.554 -2.034 -0.209 0.82 74.31 ? C12 WE1 503 A 1 
HETATM 18 C C14 WE1 . . . D 3 -19.893 1.49 0.769 0.82 76.04 ? C14 WE1 503 A 1 
HETATM 19 C C16 WE1 . . . D 3 -17.336 1.194 0.635 0.82 79.34 ? C16 WE1 503 A 1 
HETATM 20 C C18 WE1 . . . D 3 -18.348 3.644 -5.947 0.82 68.62 ? C18 WE1 503 A 1 
HETATM 21 C C19 WE1 . . . D 3 -17.843 3.917 -7.205 0.82 65.77 ? C19 WE1 503 A 1 
HETATM 22 C C2 WE1 . . . D 3 -17.396 2.756 -14.151 0.82 57.1 ? C2 WE1 503 A 1 
HETATM 23 C C3 WE1 . . . D 3 -16.385 3.636 -14.029 0.82 58.54 ? C3 WE1 503 A 1 
HETATM 24 C C9 WE1 . . . D 3 -20.082 -0.444 -2.023 0.82 80.48 ? C9 WE1 503 A 1 
HETATM 25 N N2 WE1 . . . D 3 -19.453 2.219 -4.373 0.82 57.03 ? N2 WE1 503 A 1 
HETATM 26 N N4 WE1 . . . D 3 -19.509 0.133 0.354 0.82 78.1 ? N4 WE1 503 A 1 
HETATM 27 O O1 WE1 . . . D 3 -17.799 1.326 1.977 0.82 75.19 ? O1 WE1 503 A 1 
HETATM 28 O O2 WE1 . . . D 3 -20.875 0.42 -4.554 0.82 55.93 ? O2 WE1 503 A 1 
HETATM 29 S S WE1 . . . D 3 -16.095 3.979 -12.39 0.82 60.53 ? S WE1 503 A 1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           29 
#