data_7KH7 # _model_server_result.job_id E6QzFySP47BOZmK2hRlKzQ _model_server_result.datetime_utc '2024-11-16 01:32:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kh7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":404}' # _entry.id 7KH7 # _exptl.entry_id 7KH7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KH7 _cell.length_a 69.922 _cell.length_b 92.085 _cell.length_c 101.645 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KH7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 J N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 73 A ALA 73 1_555 G MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc2 A OE1 GLU 98 A GLU 98 1_555 G MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc3 A OD1 ASP 190 A ASP 190 1_555 E MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc4 A OD2 ASP 190 A ASP 190 1_555 F MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc5 A OE2 GLU 194 A GLU 194 1_555 F MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc6 E MG MG . A MG 503 1_555 L O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc7 E MG MG . A MG 503 1_555 L O HOH . A HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc8 E MG MG . A MG 503 1_555 H O01 WBY . B WBY 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc9 E MG MG . A MG 503 1_555 H O13 WBY . B WBY 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc10 E MG MG . A MG 503 1_555 M O HOH . B HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc11 F MG MG . A MG 504 1_555 L O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc12 F MG MG . A MG 504 1_555 L O HOH . A HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc13 F MG MG . A MG 504 1_555 H O12 WBY . B WBY 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc14 F MG MG . A MG 504 1_555 H O13 WBY . B WBY 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc15 B OD1 ASP 190 B ASP 190 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc16 B OD2 ASP 190 B ASP 190 1_555 K MG MG . B MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? metalc ? metalc17 B OE2 GLU 194 B GLU 194 1_555 K MG MG . B MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.811 ? metalc ? metalc18 I O01 WBY . B WBY 402 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc19 I O13 WBY . B WBY 402 1_555 J MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc20 I O12 WBY . B WBY 402 1_555 K MG MG . B MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc21 I O13 WBY . B WBY 402 1_555 K MG MG . B MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc22 J MG MG . B MG 403 1_555 M O HOH . B HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc23 J MG MG . B MG 403 1_555 M O HOH . B HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc24 J MG MG . B MG 403 1_555 M O HOH . B HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? metalc ? metalc25 K MG MG . B MG 404 1_555 M O HOH . B HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc26 K MG MG . B MG 404 1_555 M O HOH . B HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7KH7 _atom_sites.fract_transf_matrix[1][1] 0.014302 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01086 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009838 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 501 501 NAP NAP . D 3 NDP A 1 502 501 NDP NDP . E 4 MG A 1 503 3 MG MG . F 4 MG A 1 504 4 MG MG . G 4 MG A 1 505 5 MG MG . H 5 WBY B 1 401 401 WBY WBY . I 5 WBY B 1 402 401 WBY WBY . J 4 MG B 1 403 1 MG MG . K 4 MG B 1 404 2 MG MG . L 6 HOH A 1 601 8 HOH HOH . L 6 HOH A 2 602 7 HOH HOH . L 6 HOH A 3 603 55 HOH HOH . L 6 HOH A 4 604 58 HOH HOH . L 6 HOH A 5 605 57 HOH HOH . L 6 HOH A 6 606 35 HOH HOH . L 6 HOH A 7 607 2 HOH HOH . L 6 HOH A 8 608 50 HOH HOH . L 6 HOH A 9 609 9 HOH HOH . L 6 HOH A 10 610 22 HOH HOH . L 6 HOH A 11 611 51 HOH HOH . L 6 HOH A 12 612 31 HOH HOH . L 6 HOH A 13 613 4 HOH HOH . L 6 HOH A 14 614 27 HOH HOH . L 6 HOH A 15 615 45 HOH HOH . L 6 HOH A 16 616 56 HOH HOH . L 6 HOH A 17 617 10 HOH HOH . L 6 HOH A 18 618 37 HOH HOH . L 6 HOH A 19 619 20 HOH HOH . L 6 HOH A 20 620 47 HOH HOH . L 6 HOH A 21 621 40 HOH HOH . L 6 HOH A 22 622 59 HOH HOH . L 6 HOH A 23 623 48 HOH HOH . L 6 HOH A 24 624 29 HOH HOH . L 6 HOH A 25 625 54 HOH HOH . L 6 HOH A 26 626 38 HOH HOH . L 6 HOH A 27 627 33 HOH HOH . L 6 HOH A 28 628 32 HOH HOH . L 6 HOH A 29 629 52 HOH HOH . M 6 HOH B 1 501 13 HOH HOH . M 6 HOH B 2 502 18 HOH HOH . M 6 HOH B 3 503 30 HOH HOH . M 6 HOH B 4 504 41 HOH HOH . M 6 HOH B 5 505 25 HOH HOH . M 6 HOH B 6 506 23 HOH HOH . M 6 HOH B 7 507 24 HOH HOH . M 6 HOH B 8 508 6 HOH HOH . M 6 HOH B 9 509 39 HOH HOH . M 6 HOH B 10 510 14 HOH HOH . M 6 HOH B 11 511 3 HOH HOH . M 6 HOH B 12 512 34 HOH HOH . M 6 HOH B 13 513 17 HOH HOH . M 6 HOH B 14 514 15 HOH HOH . M 6 HOH B 15 515 43 HOH HOH . M 6 HOH B 16 516 5 HOH HOH . M 6 HOH B 17 517 12 HOH HOH . M 6 HOH B 18 518 44 HOH HOH . M 6 HOH B 19 519 49 HOH HOH . M 6 HOH B 20 520 11 HOH HOH . M 6 HOH B 21 521 19 HOH HOH . M 6 HOH B 22 522 28 HOH HOH . M 6 HOH B 23 523 16 HOH HOH . M 6 HOH B 24 524 1 HOH HOH . M 6 HOH B 25 525 26 HOH HOH . M 6 HOH B 26 526 61 HOH HOH . M 6 HOH B 27 527 62 HOH HOH . M 6 HOH B 28 528 60 HOH HOH . M 6 HOH B 29 529 53 HOH HOH . M 6 HOH B 30 530 21 HOH HOH . M 6 HOH B 31 531 46 HOH HOH . M 6 HOH B 32 532 42 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 4 _atom_site.Cartn_x -15.366 _atom_site.Cartn_y -18.893 _atom_site.Cartn_z -34.159 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 404 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #