data_7KHO
#
_model_server_result.job_id            mEUpWIGMAfucq8ky-wndCQ 
_model_server_result.datetime_utc      '2024-11-26 04:08:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kho 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":501}' 
#
_entry.id    7KHO 
#
_exptl.entry_id    7KHO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              162.232 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7KHO 
_cell.length_a            87.398 
_cell.length_b            134.565 
_cell.length_c            168.684 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 7KHO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,M 1 1 
B,G,H,N 2 1 
C,I,J,O 3 1 
D,K,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C10 H14 N2' 
_chem_comp.formula_weight    162.232 
_chem_comp.id                NCT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '(S)-(-)-NICOTINE;3-[(2S)-1-METHYL-2-PYRROLIDINYL] PYRIDINE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C1 NCT doub 328 n y 
N1 C5 NCT sing 329 n y 
C1 C2 NCT sing 330 n y 
C1 HC1 NCT sing 331 n n 
C2 C3 NCT doub 332 n y 
C2 C6 NCT sing 333 n n 
C3 C4 NCT sing 334 n y 
C3 HC3 NCT sing 335 n n 
C4 C5 NCT doub 336 n y 
C4 HC4 NCT sing 337 n n 
C5 HC5 NCT sing 338 n n 
N2 C6 NCT sing 339 n n 
N2 C9 NCT sing 340 n n 
N2 C10 NCT sing 341 n n 
C6 C7 NCT sing 342 n n 
C6 HC6 NCT sing 343 n n 
C7 C8 NCT sing 344 n n 
C7 HC71 NCT sing 345 n n 
C7 HC72 NCT sing 346 n n 
C8 C9 NCT sing 347 n n 
C8 HC81 NCT sing 348 n n 
C8 HC82 NCT sing 349 n n 
C9 HC91 NCT sing 350 n n 
C9 HC92 NCT sing 351 n n 
C10 H101 NCT sing 352 n n 
C10 H102 NCT sing 353 n n 
C10 H103 NCT sing 354 n n 
#
_atom_sites.entry_id                     7KHO 
_atom_sites.fract_transf_matrix[1][1]    0.011442 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007431 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005928 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NCT A 1 501 1 NCT NCT . 
F 3 FAD A 1 502 1 FAD FVN . 
G 2 NCT B 1 501 2 NCT NCT . 
H 3 FAD B 1 502 2 FAD FVN . 
I 2 NCT C 1 501 3 NCT NCT . 
J 3 FAD C 1 502 3 FAD FVN . 
K 2 NCT D 1 501 4 NCT NCT . 
L 3 FAD D 1 502 4 FAD FVN . 
M 4 HOH A 1 601 1 HOH HOH . 
M 4 HOH A 2 602 7 HOH HOH . 
M 4 HOH A 3 603 2 HOH HOH . 
M 4 HOH A 4 604 4 HOH HOH . 
M 4 HOH A 5 605 5 HOH HOH . 
M 4 HOH A 6 606 6 HOH HOH . 
M 4 HOH A 7 607 3 HOH HOH . 
N 4 HOH B 1 601 11 HOH HOH . 
N 4 HOH B 2 602 9 HOH HOH . 
N 4 HOH B 3 603 10 HOH HOH . 
N 4 HOH B 4 604 12 HOH HOH . 
N 4 HOH B 5 605 14 HOH HOH . 
N 4 HOH B 6 606 13 HOH HOH . 
N 4 HOH B 7 607 15 HOH HOH . 
N 4 HOH B 8 608 8 HOH HOH . 
O 4 HOH C 1 601 17 HOH HOH . 
O 4 HOH C 2 602 16 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 NCT . . . K 2 13.916 -25.978 7.021 1 82.03 ? N1 NCT 501 D 1 
HETATM 2 C C1 NCT . . . K 2 14.99 -25.777 7.815 1 76.19 ? C1 NCT 501 D 1 
HETATM 3 C C2 NCT . . . K 2 15.294 -26.562 8.911 1 76.72 ? C2 NCT 501 D 1 
HETATM 4 C C3 NCT . . . K 2 14.451 -27.623 9.217 1 81.43 ? C3 NCT 501 D 1 
HETATM 5 C C4 NCT . . . K 2 13.336 -27.861 8.421 1 82.61 ? C4 NCT 501 D 1 
HETATM 6 C C5 NCT . . . K 2 13.114 -27.017 7.344 1 82.59 ? C5 NCT 501 D 1 
HETATM 7 N N2 NCT . . . K 2 16.392 -26.875 11.064 1 82.76 ? N2 NCT 501 D 1 
HETATM 8 C C6 NCT . . . K 2 16.503 -26.297 9.767 1 78.73 ? C6 NCT 501 D 1 
HETATM 9 C C7 NCT . . . K 2 17.855 -27.045 9.197 1 70.28 ? C7 NCT 501 D 1 
HETATM 10 C C8 NCT . . . K 2 18.483 -27.651 10.443 1 72.42 ? C8 NCT 501 D 1 
HETATM 11 C C9 NCT . . . K 2 17.758 -26.96 11.581 1 75.93 ? C9 NCT 501 D 1 
HETATM 12 C C10 NCT . . . K 2 15.558 -25.985 11.864 1 63.99 ? C10 NCT 501 D 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           237 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           12 
#