data_7KHO
#
_model_server_result.job_id            GBdnAlgQre_Nl2IeWymLMA 
_model_server_result.datetime_utc      '2024-11-26 03:18:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kho 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":502}' 
#
_entry.id    7KHO 
#
_exptl.entry_id    7KHO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7KHO 
_cell.length_a            87.398 
_cell.length_b            134.565 
_cell.length_c            168.684 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7KHO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,M 1 1 
B,G,H,N 2 1 
C,I,J,O 3 1 
D,K,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     7KHO 
_atom_sites.fract_transf_matrix[1][1]    0.011442 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007431 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005928 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NCT A 1 501 1 NCT NCT . 
F 3 FAD A 1 502 1 FAD FVN . 
G 2 NCT B 1 501 2 NCT NCT . 
H 3 FAD B 1 502 2 FAD FVN . 
I 2 NCT C 1 501 3 NCT NCT . 
J 3 FAD C 1 502 3 FAD FVN . 
K 2 NCT D 1 501 4 NCT NCT . 
L 3 FAD D 1 502 4 FAD FVN . 
M 4 HOH A 1 601 1 HOH HOH . 
M 4 HOH A 2 602 7 HOH HOH . 
M 4 HOH A 3 603 2 HOH HOH . 
M 4 HOH A 4 604 4 HOH HOH . 
M 4 HOH A 5 605 5 HOH HOH . 
M 4 HOH A 6 606 6 HOH HOH . 
M 4 HOH A 7 607 3 HOH HOH . 
N 4 HOH B 1 601 11 HOH HOH . 
N 4 HOH B 2 602 9 HOH HOH . 
N 4 HOH B 3 603 10 HOH HOH . 
N 4 HOH B 4 604 12 HOH HOH . 
N 4 HOH B 5 605 14 HOH HOH . 
N 4 HOH B 6 606 13 HOH HOH . 
N 4 HOH B 7 607 15 HOH HOH . 
N 4 HOH B 8 608 8 HOH HOH . 
O 4 HOH C 1 601 17 HOH HOH . 
O 4 HOH C 2 602 16 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . J 3 11.165 11.723 2.577 1 51.9 ? PA FAD 502 C 1 
HETATM 2 O O1A FAD . . . J 3 11.058 13.181 2.839 1 57.31 ? O1A FAD 502 C 1 
HETATM 3 O O2A FAD . . . J 3 10.228 10.828 3.433 1 54.56 ? O2A FAD 502 C 1 
HETATM 4 O O5B FAD . . . J 3 12.693 11.234 2.683 1 50.67 ? O5B FAD 502 C 1 
HETATM 5 C C5B FAD . . . J 3 13.72 12.051 3.199 1 56.2 ? C5B FAD 502 C 1 
HETATM 6 C C4B FAD . . . J 3 14.752 11.152 3.865 1 59.15 ? C4B FAD 502 C 1 
HETATM 7 O O4B FAD . . . J 3 15.843 11.976 4.2 1 64.42 ? O4B FAD 502 C 1 
HETATM 8 C C3B FAD . . . J 3 14.229 10.555 5.163 1 58.27 ? C3B FAD 502 C 1 
HETATM 9 O O3B FAD . . . J 3 14.582 9.18 5.193 1 57.67 ? O3B FAD 502 C 1 
HETATM 10 C C2B FAD . . . J 3 14.974 11.29 6.237 1 58.09 ? C2B FAD 502 C 1 
HETATM 11 O O2B FAD . . . J 3 15.202 10.384 7.297 1 54.65 ? O2B FAD 502 C 1 
HETATM 12 C C1B FAD . . . J 3 16.252 11.738 5.534 1 61.66 ? C1B FAD 502 C 1 
HETATM 13 N N9A FAD . . . J 3 16.934 12.96 6.029 1 52.74 ? N9A FAD 502 C 1 
HETATM 14 C C8A FAD . . . J 3 16.405 14.169 6.425 1 56.5 ? C8A FAD 502 C 1 
HETATM 15 N N7A FAD . . . J 3 17.401 15.014 6.803 1 54.95 ? N7A FAD 502 C 1 
HETATM 16 C C5A FAD . . . J 3 18.583 14.363 6.65 1 46.03 ? C5A FAD 502 C 1 
HETATM 17 C C6A FAD . . . J 3 19.914 14.751 6.884 1 55.6 ? C6A FAD 502 C 1 
HETATM 18 N N6A FAD . . . J 3 20.245 15.994 7.358 1 56.93 ? N6A FAD 502 C 1 
HETATM 19 N N1A FAD . . . J 3 20.897 13.8 6.608 1 59.09 ? N1A FAD 502 C 1 
HETATM 20 C C2A FAD . . . J 3 20.607 12.538 6.131 1 58.23 ? C2A FAD 502 C 1 
HETATM 21 N N3A FAD . . . J 3 19.293 12.192 5.913 1 50.86 ? N3A FAD 502 C 1 
HETATM 22 C C4A FAD . . . J 3 18.303 13.08 6.164 1 45.23 ? C4A FAD 502 C 1 
HETATM 23 N N1 FAD . . . J 3 2.044 9.78 -0.677 1 58.63 ? N1 FAD 502 C 1 
HETATM 24 C C2 FAD . . . J 3 1.316 8.898 -1.469 1 60.96 ? C2 FAD 502 C 1 
HETATM 25 O O2 FAD . . . J 3 1.734 8.622 -2.604 1 70.42 ? O2 FAD 502 C 1 
HETATM 26 N N3 FAD . . . J 3 0.128 8.319 -1.007 1 64.03 ? N3 FAD 502 C 1 
HETATM 27 C C4 FAD . . . J 3 -0.332 8.634 0.267 1 61.33 ? C4 FAD 502 C 1 
HETATM 28 O O4 FAD . . . J 3 -1.377 8.151 0.723 1 53.99 ? O4 FAD 502 C 1 
HETATM 29 C C4X FAD . . . J 3 0.384 9.515 1.064 1 56.18 ? C4X FAD 502 C 1 
HETATM 30 N N5 FAD . . . J 3 -0.067 9.836 2.344 1 63.35 ? N5 FAD 502 C 1 
HETATM 31 C C5X FAD . . . J 3 0.759 10.44 3.259 1 60.76 ? C5X FAD 502 C 1 
HETATM 32 C C6 FAD . . . J 3 0.434 10.453 4.614 1 63.31 ? C6 FAD 502 C 1 
HETATM 33 C C7 FAD . . . J 3 1.282 11.095 5.52 1 59.19 ? C7 FAD 502 C 1 
HETATM 34 C C7M FAD . . . J 3 0.88 11.082 6.985 1 63.09 ? C7M FAD 502 C 1 
HETATM 35 C C8 FAD . . . J 3 2.457 11.721 5.047 1 63.81 ? C8 FAD 502 C 1 
HETATM 36 C C8M FAD . . . J 3 3.437 12.443 5.951 1 56.22 ? C8M FAD 502 C 1 
HETATM 37 C C9 FAD . . . J 3 2.753 11.692 3.685 1 61.08 ? C9 FAD 502 C 1 
HETATM 38 C C9A FAD . . . J 3 1.923 11.055 2.782 1 60 ? C9A FAD 502 C 1 
HETATM 39 N N10 FAD . . . J 3 2.233 10.958 1.422 1 68.29 ? N10 FAD 502 C 1 
HETATM 40 C C10 FAD . . . J 3 1.57 10.08 0.592 1 59.37 ? C10 FAD 502 C 1 
HETATM 41 C C1' FAD . . . J 3 3.495 11.533 0.908 1 56.8 ? C1' FAD 502 C 1 
HETATM 42 C C2' FAD . . . J 3 4.637 10.623 1.284 1 58.25 ? C2' FAD 502 C 1 
HETATM 43 O O2' FAD . . . J 3 4.564 9.803 2.411 1 66.46 ? O2' FAD 502 C 1 
HETATM 44 C C3' FAD . . . J 3 6.038 11.188 0.954 1 59.52 ? C3' FAD 502 C 1 
HETATM 45 O O3' FAD . . . J 3 5.676 12.417 0.32 1 51.27 ? O3' FAD 502 C 1 
HETATM 46 C C4' FAD . . . J 3 7.201 10.702 0.108 1 60.33 ? C4' FAD 502 C 1 
HETATM 47 O O4' FAD . . . J 3 7.873 9.739 0.886 1 52.19 ? O4' FAD 502 C 1 
HETATM 48 C C5' FAD . . . J 3 8.056 11.958 -0.081 1 55.35 ? C5' FAD 502 C 1 
HETATM 49 O O5' FAD . . . J 3 9.214 11.734 -0.844 1 57.52 ? O5' FAD 502 C 1 
HETATM 50 P P FAD . . . J 3 10.715 11.943 -0.238 1 55.93 ? P FAD 502 C 1 
HETATM 51 O O1P FAD . . . J 3 11.738 11.345 -1.157 1 58.21 ? O1P FAD 502 C 1 
HETATM 52 O O2P FAD . . . J 3 10.962 13.469 -0.096 1 60.41 ? O2P FAD 502 C 1 
HETATM 53 O O3P FAD . . . J 3 10.754 11.212 1.031 1 69.89 ? O3P FAD 502 C 1 
HETATM 54 H H51A FAD . . . J 3 14.122 12.535 2.502 1 67.72 ? H51A FAD 502 C 1 
HETATM 55 H H52A FAD . . . J 3 13.364 12.648 3.831 1 67.72 ? H52A FAD 502 C 1 
HETATM 56 H HO3A FAD . . . J 3 15.297 9.068 4.782 1 69.48 ? HO3A FAD 502 C 1 
HETATM 57 H HO2A FAD . . . J 3 14.986 10.739 8.017 1 65.86 ? HO2A FAD 502 C 1 
HETATM 58 H H1B FAD . . . J 3 15.508 10.558 5.989 1 69.99 ? H1B FAD 502 C 1 
HETATM 59 H H8A FAD . . . J 3 15.646 14.504 6.005 1 68.07 ? H8A FAD 502 C 1 
HETATM 60 H H61A FAD . . . J 3 19.534 16.492 7.388 1 68.6 ? H61A FAD 502 C 1 
HETATM 61 H H62A FAD . . . J 3 20.579 15.92 8.156 1 68.6 ? H62A FAD 502 C 1 
HETATM 62 H H2A FAD . . . J 3 21.289 11.93 5.959 1 70.16 ? H2A FAD 502 C 1 
HETATM 63 H HN3 FAD . . . J 3 -0.317 7.77 -1.511 1 77.12 ? HN3 FAD 502 C 1 
HETATM 64 H H6 FAD . . . J 3 -0.342 10.037 4.913 1 76.25 ? H6 FAD 502 C 1 
HETATM 65 H HM71 FAD . . . J 3 1.419 10.47 7.452 1 75.99 ? HM71 FAD 502 C 1 
HETATM 66 H HM72 FAD . . . J 3 -0.021 10.826 7.061 1 75.99 ? HM72 FAD 502 C 1 
HETATM 67 H HM73 FAD . . . J 3 0.993 11.94 7.349 1 75.99 ? HM73 FAD 502 C 1 
HETATM 68 H HM81 FAD . . . J 3 4.298 12.394 5.58 1 67.74 ? HM81 FAD 502 C 1 
HETATM 69 H HM82 FAD . . . J 3 3.182 13.343 6.034 1 67.74 ? HM82 FAD 502 C 1 
HETATM 70 H HM83 FAD . . . J 3 3.438 12.038 6.798 1 67.74 ? HM83 FAD 502 C 1 
HETATM 71 H H9 FAD . . . J 3 3.524 12.109 3.377 1 73.57 ? H9 FAD 502 C 1 
HETATM 72 H "H1'1" FAD . . . J 3 3.632 12.383 1.283 1 68.43 ? "H1'1" FAD 502 C 1 
HETATM 73 H "H1'2" FAD . . . J 3 3.449 11.614 -0.026 1 68.43 ? "H1'2" FAD 502 C 1 
HETATM 74 H H2' FAD . . . J 3 4.422 9.974 0.639 1 70.17 ? H2' FAD 502 C 1 
HETATM 75 H HO2' FAD . . . J 3 4.689 10.26 3.095 1 80.03 ? HO2' FAD 502 C 1 
HETATM 76 H H3' FAD . . . J 3 6.496 11.117 1.771 1 71.71 ? H3' FAD 502 C 1 
HETATM 77 H HO3' FAD . . . J 3 5.463 12.976 0.898 1 61.81 ? HO3' FAD 502 C 1 
HETATM 78 H H4' FAD . . . J 3 6.942 10.361 -0.727 1 72.68 ? H4' FAD 502 C 1 
HETATM 79 H HO4' FAD . . . J 3 8.171 10.097 1.575 1 62.9 ? HO4' FAD 502 C 1 
HETATM 80 H "H5'1" FAD . . . J 3 7.536 12.61 -0.513 1 66.69 ? "H5'1" FAD 502 C 1 
HETATM 81 H "H5'2" FAD . . . J 3 8.313 12.274 0.765 1 66.69 ? "H5'2" FAD 502 C 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           81 
#