data_7KHS # _model_server_result.job_id Wo7pIw54H4MRf-gShQ41rA _model_server_result.datetime_utc '2025-03-04 17:13:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7khs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":502}' # _entry.id 7KHS # _exptl.entry_id 7KHS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.25 _cell.angle_gamma 90 _cell.entry_id 7KHS _cell.length_a 105.231 _cell.length_b 83.076 _cell.length_c 122.964 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KHS _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,L,M 1 1 C,D,H,I,J,K,N,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 L O HOH . A HOH 641 1_555 G CA CA . B CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc2 B OE1 GLU 390 B GLU 388 1_555 G CA CA . B CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc3 G CA CA . B CA 502 1_555 M O HOH . B HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc4 G CA CA . B CA 502 1_555 M O HOH . B HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc5 G CA CA . B CA 502 1_555 M O HOH . B HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc6 G CA CA . B CA 502 1_555 M O HOH . B HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc7 D OE1 GLU 390 D GLU 388 1_555 K CA CA . D CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc8 K CA CA . D CA 502 1_555 O O HOH . D HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc9 K CA CA . D CA 502 1_555 O O HOH . D HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc10 K CA CA . D CA 502 1_555 O O HOH . D HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc11 K CA CA . D CA 502 1_555 O O HOH . D HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc12 K CA CA . D CA 502 1_555 O O HOH . D HOH 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7KHS _atom_sites.fract_transf_matrix[1][1] 0.009503 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000041 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012037 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008133 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 WG4 A 1 501 1 WG4 INX . F 2 WG4 B 1 501 2 WG4 INX . G 3 CA B 1 502 3 CA CA . H 2 WG4 C 1 501 3 WG4 INX . I 4 EDO C 1 502 2 EDO EDO . J 2 WG4 D 1 501 4 WG4 INX . K 3 CA D 1 502 1 CA CA . L 5 HOH A 1 601 305 HOH HOH . L 5 HOH A 2 602 167 HOH HOH . L 5 HOH A 3 603 99 HOH HOH . L 5 HOH A 4 604 245 HOH HOH . L 5 HOH A 5 605 123 HOH HOH . L 5 HOH A 6 606 270 HOH HOH . L 5 HOH A 7 607 111 HOH HOH . L 5 HOH A 8 608 79 HOH HOH . L 5 HOH A 9 609 105 HOH HOH . L 5 HOH A 10 610 63 HOH HOH . L 5 HOH A 11 611 162 HOH HOH . L 5 HOH A 12 612 135 HOH HOH . L 5 HOH A 13 613 65 HOH HOH . L 5 HOH A 14 614 266 HOH HOH . L 5 HOH A 15 615 170 HOH HOH . L 5 HOH A 16 616 272 HOH HOH . L 5 HOH A 17 617 253 HOH HOH . L 5 HOH A 18 618 64 HOH HOH . L 5 HOH A 19 619 251 HOH HOH . L 5 HOH A 20 620 95 HOH HOH . L 5 HOH A 21 621 78 HOH HOH . L 5 HOH A 22 622 76 HOH HOH . L 5 HOH A 23 623 77 HOH HOH . L 5 HOH A 24 624 141 HOH HOH . L 5 HOH A 25 625 271 HOH HOH . L 5 HOH A 26 626 8 HOH HOH . L 5 HOH A 27 627 259 HOH HOH . L 5 HOH A 28 628 124 HOH HOH . L 5 HOH A 29 629 107 HOH HOH . L 5 HOH A 30 630 136 HOH HOH . L 5 HOH A 31 631 328 HOH HOH . L 5 HOH A 32 632 145 HOH HOH . L 5 HOH A 33 633 138 HOH HOH . L 5 HOH A 34 634 75 HOH HOH . L 5 HOH A 35 635 106 HOH HOH . L 5 HOH A 36 636 329 HOH HOH . L 5 HOH A 37 637 250 HOH HOH . L 5 HOH A 38 638 153 HOH HOH . L 5 HOH A 39 639 125 HOH HOH . L 5 HOH A 40 640 323 HOH HOH . L 5 HOH A 41 641 334 HOH HOH . L 5 HOH A 42 642 56 HOH HOH . L 5 HOH A 43 643 139 HOH HOH . L 5 HOH A 44 644 128 HOH HOH . L 5 HOH A 45 645 240 HOH HOH . L 5 HOH A 46 646 169 HOH HOH . L 5 HOH A 47 647 104 HOH HOH . L 5 HOH A 48 648 164 HOH HOH . L 5 HOH A 49 649 118 HOH HOH . L 5 HOH A 50 650 126 HOH HOH . L 5 HOH A 51 651 117 HOH HOH . L 5 HOH A 52 652 161 HOH HOH . L 5 HOH A 53 653 116 HOH HOH . L 5 HOH A 54 654 133 HOH HOH . L 5 HOH A 55 655 151 HOH HOH . L 5 HOH A 56 656 261 HOH HOH . L 5 HOH A 57 657 119 HOH HOH . L 5 HOH A 58 658 127 HOH HOH . L 5 HOH A 59 659 1 HOH HOH . L 5 HOH A 60 660 110 HOH HOH . L 5 HOH A 61 661 113 HOH HOH . L 5 HOH A 62 662 269 HOH HOH . L 5 HOH A 63 663 165 HOH HOH . L 5 HOH A 64 664 154 HOH HOH . L 5 HOH A 65 665 103 HOH HOH . L 5 HOH A 66 666 146 HOH HOH . L 5 HOH A 67 667 237 HOH HOH . L 5 HOH A 68 668 120 HOH HOH . L 5 HOH A 69 669 159 HOH HOH . L 5 HOH A 70 670 236 HOH HOH . L 5 HOH A 71 671 158 HOH HOH . L 5 HOH A 72 672 152 HOH HOH . L 5 HOH A 73 673 144 HOH HOH . L 5 HOH A 74 674 28 HOH HOH . L 5 HOH A 75 675 29 HOH HOH . L 5 HOH A 76 676 160 HOH HOH . L 5 HOH A 77 677 6 HOH HOH . L 5 HOH A 78 678 320 HOH HOH . L 5 HOH A 79 679 150 HOH HOH . L 5 HOH A 80 680 66 HOH HOH . L 5 HOH A 81 681 276 HOH HOH . L 5 HOH A 82 682 249 HOH HOH . L 5 HOH A 83 683 115 HOH HOH . L 5 HOH A 84 684 264 HOH HOH . L 5 HOH A 85 685 137 HOH HOH . L 5 HOH A 86 686 275 HOH HOH . L 5 HOH A 87 687 238 HOH HOH . L 5 HOH A 88 688 333 HOH HOH . L 5 HOH A 89 689 267 HOH HOH . L 5 HOH A 90 690 257 HOH HOH . L 5 HOH A 91 691 273 HOH HOH . L 5 HOH A 92 692 252 HOH HOH . L 5 HOH A 93 693 129 HOH HOH . L 5 HOH A 94 694 130 HOH HOH . L 5 HOH A 95 695 142 HOH HOH . L 5 HOH A 96 696 114 HOH HOH . L 5 HOH A 97 697 143 HOH HOH . L 5 HOH A 98 698 171 HOH HOH . L 5 HOH A 99 699 148 HOH HOH . L 5 HOH A 100 700 108 HOH HOH . L 5 HOH A 101 701 248 HOH HOH . L 5 HOH A 102 702 166 HOH HOH . L 5 HOH A 103 703 140 HOH HOH . L 5 HOH A 104 704 239 HOH HOH . L 5 HOH A 105 705 168 HOH HOH . L 5 HOH A 106 706 243 HOH HOH . L 5 HOH A 107 707 147 HOH HOH . L 5 HOH A 108 708 242 HOH HOH . L 5 HOH A 109 709 112 HOH HOH . L 5 HOH A 110 710 157 HOH HOH . L 5 HOH A 111 711 94 HOH HOH . L 5 HOH A 112 712 149 HOH HOH . L 5 HOH A 113 713 244 HOH HOH . L 5 HOH A 114 714 155 HOH HOH . L 5 HOH A 115 715 241 HOH HOH . L 5 HOH A 116 716 156 HOH HOH . M 5 HOH B 1 601 246 HOH HOH . M 5 HOH B 2 602 303 HOH HOH . M 5 HOH B 3 603 299 HOH HOH . M 5 HOH B 4 604 286 HOH HOH . M 5 HOH B 5 605 324 HOH HOH . M 5 HOH B 6 606 281 HOH HOH . M 5 HOH B 7 607 254 HOH HOH . M 5 HOH B 8 608 260 HOH HOH . M 5 HOH B 9 609 285 HOH HOH . M 5 HOH B 10 610 325 HOH HOH . M 5 HOH B 11 611 231 HOH HOH . M 5 HOH B 12 612 302 HOH HOH . M 5 HOH B 13 613 321 HOH HOH . M 5 HOH B 14 614 277 HOH HOH . M 5 HOH B 15 615 235 HOH HOH . M 5 HOH B 16 616 287 HOH HOH . M 5 HOH B 17 617 300 HOH HOH . M 5 HOH B 18 618 263 HOH HOH . M 5 HOH B 19 619 284 HOH HOH . M 5 HOH B 20 620 282 HOH HOH . M 5 HOH B 21 621 283 HOH HOH . M 5 HOH B 22 622 280 HOH HOH . M 5 HOH B 23 623 274 HOH HOH . M 5 HOH B 24 624 279 HOH HOH . M 5 HOH B 25 625 255 HOH HOH . M 5 HOH B 26 626 256 HOH HOH . M 5 HOH B 27 627 332 HOH HOH . M 5 HOH B 28 628 326 HOH HOH . M 5 HOH B 29 629 288 HOH HOH . M 5 HOH B 30 630 301 HOH HOH . M 5 HOH B 31 631 317 HOH HOH . M 5 HOH B 32 632 312 HOH HOH . M 5 HOH B 33 633 278 HOH HOH . M 5 HOH B 34 634 265 HOH HOH . M 5 HOH B 35 635 258 HOH HOH . M 5 HOH B 36 636 247 HOH HOH . M 5 HOH B 37 637 318 HOH HOH . M 5 HOH B 38 638 262 HOH HOH . N 5 HOH C 1 601 290 HOH HOH . N 5 HOH C 2 602 233 HOH HOH . N 5 HOH C 3 603 308 HOH HOH . N 5 HOH C 4 604 82 HOH HOH . N 5 HOH C 5 605 306 HOH HOH . N 5 HOH C 6 606 193 HOH HOH . N 5 HOH C 7 607 83 HOH HOH . N 5 HOH C 8 608 292 HOH HOH . N 5 HOH C 9 609 192 HOH HOH . N 5 HOH C 10 610 304 HOH HOH . N 5 HOH C 11 611 289 HOH HOH . N 5 HOH C 12 612 335 HOH HOH . N 5 HOH C 13 613 97 HOH HOH . N 5 HOH C 14 614 232 HOH HOH . N 5 HOH C 15 615 307 HOH HOH . N 5 HOH C 16 616 291 HOH HOH . N 5 HOH C 17 617 311 HOH HOH . N 5 HOH C 18 618 295 HOH HOH . O 5 HOH D 1 601 182 HOH HOH . O 5 HOH D 2 602 81 HOH HOH . O 5 HOH D 3 603 298 HOH HOH . O 5 HOH D 4 604 203 HOH HOH . O 5 HOH D 5 605 202 HOH HOH . O 5 HOH D 6 606 296 HOH HOH . O 5 HOH D 7 607 200 HOH HOH . O 5 HOH D 8 608 69 HOH HOH . O 5 HOH D 9 609 199 HOH HOH . O 5 HOH D 10 610 71 HOH HOH . O 5 HOH D 11 611 72 HOH HOH . O 5 HOH D 12 612 214 HOH HOH . O 5 HOH D 13 613 190 HOH HOH . O 5 HOH D 14 614 216 HOH HOH . O 5 HOH D 15 615 197 HOH HOH . O 5 HOH D 16 616 316 HOH HOH . O 5 HOH D 17 617 319 HOH HOH . O 5 HOH D 18 618 297 HOH HOH . O 5 HOH D 19 619 73 HOH HOH . O 5 HOH D 20 620 189 HOH HOH . O 5 HOH D 21 621 195 HOH HOH . O 5 HOH D 22 622 217 HOH HOH . O 5 HOH D 23 623 74 HOH HOH . O 5 HOH D 24 624 204 HOH HOH . O 5 HOH D 25 625 181 HOH HOH . O 5 HOH D 26 626 227 HOH HOH . O 5 HOH D 27 627 80 HOH HOH . O 5 HOH D 28 628 96 HOH HOH . O 5 HOH D 29 629 191 HOH HOH . O 5 HOH D 30 630 208 HOH HOH . O 5 HOH D 31 631 225 HOH HOH . O 5 HOH D 32 632 228 HOH HOH . O 5 HOH D 33 633 67 HOH HOH . O 5 HOH D 34 634 68 HOH HOH . O 5 HOH D 35 635 209 HOH HOH . O 5 HOH D 36 636 330 HOH HOH . O 5 HOH D 37 637 175 HOH HOH . O 5 HOH D 38 638 223 HOH HOH . O 5 HOH D 39 639 220 HOH HOH . O 5 HOH D 40 640 198 HOH HOH . O 5 HOH D 41 641 131 HOH HOH . O 5 HOH D 42 642 194 HOH HOH . O 5 HOH D 43 643 176 HOH HOH . O 5 HOH D 44 644 219 HOH HOH . O 5 HOH D 45 645 178 HOH HOH . O 5 HOH D 46 646 86 HOH HOH . O 5 HOH D 47 647 184 HOH HOH . O 5 HOH D 48 648 331 HOH HOH . O 5 HOH D 49 649 224 HOH HOH . O 5 HOH D 50 650 187 HOH HOH . O 5 HOH D 51 651 201 HOH HOH . O 5 HOH D 52 652 210 HOH HOH . O 5 HOH D 53 653 314 HOH HOH . O 5 HOH D 54 654 211 HOH HOH . O 5 HOH D 55 655 229 HOH HOH . O 5 HOH D 56 656 207 HOH HOH . O 5 HOH D 57 657 222 HOH HOH . O 5 HOH D 58 658 322 HOH HOH . O 5 HOH D 59 659 177 HOH HOH . O 5 HOH D 60 660 70 HOH HOH . O 5 HOH D 61 661 221 HOH HOH . O 5 HOH D 62 662 294 HOH HOH . O 5 HOH D 63 663 183 HOH HOH . O 5 HOH D 64 664 121 HOH HOH . O 5 HOH D 65 665 180 HOH HOH . O 5 HOH D 66 666 293 HOH HOH . O 5 HOH D 67 667 313 HOH HOH . O 5 HOH D 68 668 310 HOH HOH . O 5 HOH D 69 669 205 HOH HOH . O 5 HOH D 70 670 93 HOH HOH . O 5 HOH D 71 671 163 HOH HOH . O 5 HOH D 72 672 215 HOH HOH . O 5 HOH D 73 673 213 HOH HOH . O 5 HOH D 74 674 172 HOH HOH . O 5 HOH D 75 675 315 HOH HOH . O 5 HOH D 76 676 185 HOH HOH . O 5 HOH D 77 677 188 HOH HOH . O 5 HOH D 78 678 327 HOH HOH . O 5 HOH D 79 679 230 HOH HOH . O 5 HOH D 80 680 309 HOH HOH . O 5 HOH D 81 681 173 HOH HOH . O 5 HOH D 82 682 179 HOH HOH . O 5 HOH D 83 683 186 HOH HOH . O 5 HOH D 84 684 206 HOH HOH . O 5 HOH D 85 685 196 HOH HOH . O 5 HOH D 86 686 212 HOH HOH . O 5 HOH D 87 687 174 HOH HOH . O 5 HOH D 88 688 132 HOH HOH . O 5 HOH D 89 689 218 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x 84.57 _atom_site.Cartn_y 35.223 _atom_site.Cartn_z 280.518 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.86 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 502 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 90 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 306 _model_server_stats.query_time_ms 491 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #