data_7KI9 # _model_server_result.job_id ODPwmEOO07DUX69GfhJx8w _model_server_result.datetime_utc '2024-11-16 04:55:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ki9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7KI9 # _exptl.entry_id 7KI9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 426.512 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-[2-(3-{[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]methyl}azetidin-1-yl)phenyl]piperidine-4-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.48 _cell.angle_gamma 90 _cell.entry_id 7KI9 _cell.length_a 29.43 _cell.length_b 70.79 _cell.length_c 36.18 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KI9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H30 N6 O3' _chem_comp.formula_weight 426.512 _chem_comp.id WFJ _chem_comp.mon_nstd_flag . _chem_comp.name '1-[2-(3-{[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]methyl}azetidin-1-yl)phenyl]piperidine-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N06 C05 WFJ sing 456 n n C05 N04 WFJ doub 457 n y C05 N07 WFJ sing 458 n y N04 C03 WFJ sing 459 n y N07 C08 WFJ doub 460 n y C03 C02 WFJ sing 461 n n C03 C10 WFJ doub 462 n y C08 C10 WFJ sing 463 n y C08 N09 WFJ sing 464 n n C01 C02 WFJ sing 465 n n C10 O11 WFJ sing 466 n n O11 C12 WFJ sing 467 n n C12 C13 WFJ sing 468 n n C27 C28 WFJ sing 469 n n C27 C26 WFJ sing 470 n n O31 C29 WFJ doub 471 n n C28 N23 WFJ sing 472 n n C29 C26 WFJ sing 473 n n C29 O30 WFJ sing 474 n n C26 C25 WFJ sing 475 n n C13 C14 WFJ sing 476 n n C13 C16 WFJ sing 477 n n C14 N15 WFJ sing 478 n n N15 C17 WFJ sing 479 n n N15 C16 WFJ sing 480 n n N23 C22 WFJ sing 481 n n N23 C24 WFJ sing 482 n n C17 C22 WFJ doub 483 n y C17 C18 WFJ sing 484 n y C22 C21 WFJ sing 485 n y C18 C19 WFJ doub 486 n y C21 C20 WFJ doub 487 n y C19 C20 WFJ sing 488 n y C25 C24 WFJ sing 489 n n C01 H1 WFJ sing 490 n n C01 H2 WFJ sing 491 n n C01 H3 WFJ sing 492 n n C02 H4 WFJ sing 493 n n C02 H5 WFJ sing 494 n n C12 H6 WFJ sing 495 n n C12 H7 WFJ sing 496 n n C13 H8 WFJ sing 497 n n C14 H9 WFJ sing 498 n n C14 H10 WFJ sing 499 n n C16 H11 WFJ sing 500 n n C16 H12 WFJ sing 501 n n C18 H13 WFJ sing 502 n n C19 H14 WFJ sing 503 n n C20 H15 WFJ sing 504 n n C21 H16 WFJ sing 505 n n C24 H17 WFJ sing 506 n n C24 H18 WFJ sing 507 n n C25 H19 WFJ sing 508 n n C25 H20 WFJ sing 509 n n C26 H21 WFJ sing 510 n n C27 H22 WFJ sing 511 n n C27 H23 WFJ sing 512 n n C28 H24 WFJ sing 513 n n C28 H25 WFJ sing 514 n n N06 H26 WFJ sing 515 n n N06 H27 WFJ sing 516 n n N09 H28 WFJ sing 517 n n N09 H29 WFJ sing 518 n n O30 H30 WFJ sing 519 n n # _atom_sites.entry_id 7KI9 _atom_sites.fract_transf_matrix[1][1] 0.033979 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.013368 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014126 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029702 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 201 201 NAP NAP . C 3 WFJ A 1 202 301 WFJ 912 . D 4 HOH A 1 301 210 HOH HOH . D 4 HOH A 2 302 190 HOH HOH . D 4 HOH A 3 303 244 HOH HOH . D 4 HOH A 4 304 247 HOH HOH . D 4 HOH A 5 305 181 HOH HOH . D 4 HOH A 6 306 209 HOH HOH . D 4 HOH A 7 307 69 HOH HOH . D 4 HOH A 8 308 164 HOH HOH . D 4 HOH A 9 309 65 HOH HOH . D 4 HOH A 10 310 54 HOH HOH . D 4 HOH A 11 311 35 HOH HOH . D 4 HOH A 12 312 100 HOH HOH . D 4 HOH A 13 313 87 HOH HOH . D 4 HOH A 14 314 112 HOH HOH . D 4 HOH A 15 315 11 HOH HOH . D 4 HOH A 16 316 106 HOH HOH . D 4 HOH A 17 317 94 HOH HOH . D 4 HOH A 18 318 127 HOH HOH . D 4 HOH A 19 319 261 HOH HOH . D 4 HOH A 20 320 145 HOH HOH . D 4 HOH A 21 321 26 HOH HOH . D 4 HOH A 22 322 43 HOH HOH . D 4 HOH A 23 323 24 HOH HOH . D 4 HOH A 24 324 108 HOH HOH . D 4 HOH A 25 325 85 HOH HOH . D 4 HOH A 26 326 137 HOH HOH . D 4 HOH A 27 327 10 HOH HOH . D 4 HOH A 28 328 32 HOH HOH . D 4 HOH A 29 329 129 HOH HOH . D 4 HOH A 30 330 82 HOH HOH . D 4 HOH A 31 331 126 HOH HOH . D 4 HOH A 32 332 205 HOH HOH . D 4 HOH A 33 333 88 HOH HOH . D 4 HOH A 34 334 45 HOH HOH . D 4 HOH A 35 335 14 HOH HOH . D 4 HOH A 36 336 187 HOH HOH . D 4 HOH A 37 337 53 HOH HOH . D 4 HOH A 38 338 21 HOH HOH . D 4 HOH A 39 339 170 HOH HOH . D 4 HOH A 40 340 74 HOH HOH . D 4 HOH A 41 341 12 HOH HOH . D 4 HOH A 42 342 50 HOH HOH . D 4 HOH A 43 343 264 HOH HOH . D 4 HOH A 44 344 57 HOH HOH . D 4 HOH A 45 345 47 HOH HOH . D 4 HOH A 46 346 111 HOH HOH . D 4 HOH A 47 347 204 HOH HOH . D 4 HOH A 48 348 52 HOH HOH . D 4 HOH A 49 349 98 HOH HOH . D 4 HOH A 50 350 19 HOH HOH . D 4 HOH A 51 351 80 HOH HOH . D 4 HOH A 52 352 263 HOH HOH . D 4 HOH A 53 353 154 HOH HOH . D 4 HOH A 54 354 121 HOH HOH . D 4 HOH A 55 355 165 HOH HOH . D 4 HOH A 56 356 62 HOH HOH . D 4 HOH A 57 357 63 HOH HOH . D 4 HOH A 58 358 64 HOH HOH . D 4 HOH A 59 359 150 HOH HOH . D 4 HOH A 60 360 7 HOH HOH . D 4 HOH A 61 361 28 HOH HOH . D 4 HOH A 62 362 34 HOH HOH . D 4 HOH A 63 363 107 HOH HOH . D 4 HOH A 64 364 8 HOH HOH . D 4 HOH A 65 365 49 HOH HOH . D 4 HOH A 66 366 142 HOH HOH . D 4 HOH A 67 367 175 HOH HOH . D 4 HOH A 68 368 95 HOH HOH . D 4 HOH A 69 369 68 HOH HOH . D 4 HOH A 70 370 51 HOH HOH . D 4 HOH A 71 371 59 HOH HOH . D 4 HOH A 72 372 30 HOH HOH . D 4 HOH A 73 373 114 HOH HOH . D 4 HOH A 74 374 97 HOH HOH . D 4 HOH A 75 375 86 HOH HOH . D 4 HOH A 76 376 118 HOH HOH . D 4 HOH A 77 377 91 HOH HOH . D 4 HOH A 78 378 70 HOH HOH . D 4 HOH A 79 379 16 HOH HOH . D 4 HOH A 80 380 143 HOH HOH . D 4 HOH A 81 381 37 HOH HOH . D 4 HOH A 82 382 39 HOH HOH . D 4 HOH A 83 383 239 HOH HOH . D 4 HOH A 84 384 20 HOH HOH . D 4 HOH A 85 385 40 HOH HOH . D 4 HOH A 86 386 22 HOH HOH . D 4 HOH A 87 387 42 HOH HOH . D 4 HOH A 88 388 56 HOH HOH . D 4 HOH A 89 389 125 HOH HOH . D 4 HOH A 90 390 89 HOH HOH . D 4 HOH A 91 391 120 HOH HOH . D 4 HOH A 92 392 152 HOH HOH . D 4 HOH A 93 393 2 HOH HOH . D 4 HOH A 94 394 249 HOH HOH . D 4 HOH A 95 395 146 HOH HOH . D 4 HOH A 96 396 256 HOH HOH . D 4 HOH A 97 397 116 HOH HOH . D 4 HOH A 98 398 160 HOH HOH . D 4 HOH A 99 399 157 HOH HOH . D 4 HOH A 100 400 15 HOH HOH . D 4 HOH A 101 401 31 HOH HOH . D 4 HOH A 102 402 206 HOH HOH . D 4 HOH A 103 403 254 HOH HOH . D 4 HOH A 104 404 199 HOH HOH . D 4 HOH A 105 405 17 HOH HOH . D 4 HOH A 106 406 117 HOH HOH . D 4 HOH A 107 407 192 HOH HOH . D 4 HOH A 108 408 75 HOH HOH . D 4 HOH A 109 409 18 HOH HOH . D 4 HOH A 110 410 151 HOH HOH . D 4 HOH A 111 411 23 HOH HOH . D 4 HOH A 112 412 238 HOH HOH . D 4 HOH A 113 413 128 HOH HOH . D 4 HOH A 114 414 13 HOH HOH . D 4 HOH A 115 415 79 HOH HOH . D 4 HOH A 116 416 124 HOH HOH . D 4 HOH A 117 417 223 HOH HOH . D 4 HOH A 118 418 1 HOH HOH . D 4 HOH A 119 419 179 HOH HOH . D 4 HOH A 120 420 167 HOH HOH . D 4 HOH A 121 421 46 HOH HOH . D 4 HOH A 122 422 44 HOH HOH . D 4 HOH A 123 423 90 HOH HOH . D 4 HOH A 124 424 38 HOH HOH . D 4 HOH A 125 425 83 HOH HOH . D 4 HOH A 126 426 71 HOH HOH . D 4 HOH A 127 427 260 HOH HOH . D 4 HOH A 128 428 61 HOH HOH . D 4 HOH A 129 429 195 HOH HOH . D 4 HOH A 130 430 115 HOH HOH . D 4 HOH A 131 431 201 HOH HOH . D 4 HOH A 132 432 92 HOH HOH . D 4 HOH A 133 433 123 HOH HOH . D 4 HOH A 134 434 113 HOH HOH . D 4 HOH A 135 435 147 HOH HOH . D 4 HOH A 136 436 58 HOH HOH . D 4 HOH A 137 437 66 HOH HOH . D 4 HOH A 138 438 110 HOH HOH . D 4 HOH A 139 439 101 HOH HOH . D 4 HOH A 140 440 96 HOH HOH . D 4 HOH A 141 441 188 HOH HOH . D 4 HOH A 142 442 48 HOH HOH . D 4 HOH A 143 443 132 HOH HOH . D 4 HOH A 144 444 77 HOH HOH . D 4 HOH A 145 445 134 HOH HOH . D 4 HOH A 146 446 245 HOH HOH . D 4 HOH A 147 447 136 HOH HOH . D 4 HOH A 148 448 163 HOH HOH . D 4 HOH A 149 449 119 HOH HOH . D 4 HOH A 150 450 172 HOH HOH . D 4 HOH A 151 451 60 HOH HOH . D 4 HOH A 152 452 203 HOH HOH . D 4 HOH A 153 453 208 HOH HOH . D 4 HOH A 154 454 76 HOH HOH . D 4 HOH A 155 455 84 HOH HOH . D 4 HOH A 156 456 200 HOH HOH . D 4 HOH A 157 457 148 HOH HOH . D 4 HOH A 158 458 159 HOH HOH . D 4 HOH A 159 459 250 HOH HOH . D 4 HOH A 160 460 156 HOH HOH . D 4 HOH A 161 461 233 HOH HOH . D 4 HOH A 162 462 230 HOH HOH . D 4 HOH A 163 463 202 HOH HOH . D 4 HOH A 164 464 93 HOH HOH . D 4 HOH A 165 465 246 HOH HOH . D 4 HOH A 166 466 173 HOH HOH . D 4 HOH A 167 467 215 HOH HOH . D 4 HOH A 168 468 257 HOH HOH . D 4 HOH A 169 469 109 HOH HOH . D 4 HOH A 170 470 211 HOH HOH . D 4 HOH A 171 471 196 HOH HOH . D 4 HOH A 172 472 180 HOH HOH . D 4 HOH A 173 473 174 HOH HOH . D 4 HOH A 174 474 217 HOH HOH . D 4 HOH A 175 475 135 HOH HOH . D 4 HOH A 176 476 133 HOH HOH . D 4 HOH A 177 477 226 HOH HOH . D 4 HOH A 178 478 253 HOH HOH . D 4 HOH A 179 479 231 HOH HOH . D 4 HOH A 180 480 73 HOH HOH . D 4 HOH A 181 481 236 HOH HOH . D 4 HOH A 182 482 166 HOH HOH . D 4 HOH A 183 483 252 HOH HOH . D 4 HOH A 184 484 189 HOH HOH . D 4 HOH A 185 485 248 HOH HOH . D 4 HOH A 186 486 81 HOH HOH . D 4 HOH A 187 487 235 HOH HOH . D 4 HOH A 188 488 105 HOH HOH . D 4 HOH A 189 489 171 HOH HOH . D 4 HOH A 190 490 212 HOH HOH . D 4 HOH A 191 491 194 HOH HOH . D 4 HOH A 192 492 176 HOH HOH . D 4 HOH A 193 493 214 HOH HOH . D 4 HOH A 194 494 141 HOH HOH . D 4 HOH A 195 495 149 HOH HOH . D 4 HOH A 196 496 144 HOH HOH . D 4 HOH A 197 497 41 HOH HOH . D 4 HOH A 198 498 186 HOH HOH . D 4 HOH A 199 499 103 HOH HOH . D 4 HOH A 200 500 216 HOH HOH . D 4 HOH A 201 501 139 HOH HOH . D 4 HOH A 202 502 158 HOH HOH . D 4 HOH A 203 503 130 HOH HOH . D 4 HOH A 204 504 99 HOH HOH . D 4 HOH A 205 505 67 HOH HOH . D 4 HOH A 206 506 258 HOH HOH . D 4 HOH A 207 507 198 HOH HOH . D 4 HOH A 208 508 102 HOH HOH . D 4 HOH A 209 509 193 HOH HOH . D 4 HOH A 210 510 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 WFJ . . . C 3 -8.602 16.234 11.468 1 13.22 ? C01 WFJ 202 A 1 HETATM 2 C C02 WFJ . . . C 3 -7.093 15.918 11.618 1 9.66 ? C02 WFJ 202 A 1 HETATM 3 C C03 WFJ . . . C 3 -6.775 14.537 11.091 1 7.14 ? C03 WFJ 202 A 1 HETATM 4 C C05 WFJ . . . C 3 -6.753 13.156 9.259 1 7.35 ? C05 WFJ 202 A 1 HETATM 5 C C08 WFJ . . . C 3 -6.034 12.278 11.238 1 6.83 ? C08 WFJ 202 A 1 HETATM 6 C C10 WFJ . . . C 3 -6.294 13.518 11.863 1 7.19 ? C10 WFJ 202 A 1 HETATM 7 C C12 WFJ . . . C 3 -7.277 13.367 13.967 1 13.81 ? C12 WFJ 202 A 1 HETATM 8 C C13 WFJ . . . C 3 -7.125 13.709 15.426 1 12.64 ? C13 WFJ 202 A 1 HETATM 9 C C14 WFJ . . . C 3 -6.379 15.031 15.788 1 12.88 ? C14 WFJ 202 A 1 HETATM 10 C C16 WFJ . . . C 3 -8.408 14.369 16.029 1 15.85 ? C16 WFJ 202 A 1 HETATM 11 C C17 WFJ . . . C 3 -7.997 17.004 15.998 1 17.86 ? C17 WFJ 202 A 1 HETATM 12 C C18 WFJ . . . C 3 -6.93 17.895 16.171 1 21.19 ? C18 WFJ 202 A 1 HETATM 13 C C19 WFJ . . . C 3 -7.145 19.258 16.35 1 23.61 ? C19 WFJ 202 A 1 HETATM 14 C C20 WFJ . . . C 3 -8.433 19.772 16.363 1 25.59 ? C20 WFJ 202 A 1 HETATM 15 C C21 WFJ . . . C 3 -9.503 18.894 16.188 1 24.73 ? C21 WFJ 202 A 1 HETATM 16 C C22 WFJ . . . C 3 -9.31 17.52 16.008 1 20.43 ? C22 WFJ 202 A 1 HETATM 17 C C24 WFJ . . . C 3 -11.331 16.475 16.918 1 23.42 ? C24 WFJ 202 A 1 HETATM 18 C C25 WFJ . . . C 3 -12.387 15.378 16.714 1 23.09 ? C25 WFJ 202 A 1 HETATM 19 C C26 WFJ . . . C 3 -13.018 15.465 15.317 1 19.77 ? C26 WFJ 202 A 1 HETATM 20 C C27 WFJ . . . C 3 -11.931 15.517 14.243 1 21.61 ? C27 WFJ 202 A 1 HETATM 21 C C28 WFJ . . . C 3 -10.992 16.694 14.516 1 22.22 ? C28 WFJ 202 A 1 HETATM 22 C C29 WFJ . . . C 3 -13.828 14.231 15.067 1 18.12 ? C29 WFJ 202 A 1 HETATM 23 N N04 WFJ . . . C 3 -7.001 14.34 9.788 1 7.14 ? N04 WFJ 202 A 1 HETATM 24 N N06 WFJ . . . C 3 -7.026 12.995 7.949 1 7.52 ? N06 WFJ 202 A 1 HETATM 25 N N07 WFJ . . . C 3 -6.268 12.111 9.935 1 6.77 ? N07 WFJ 202 A 1 HETATM 26 N N09 WFJ . . . C 3 -5.521 11.227 11.919 1 7.79 ? N09 WFJ 202 A 1 HETATM 27 N N15 WFJ . . . C 3 -7.715 15.658 15.798 1 13.86 ? N15 WFJ 202 A 1 HETATM 28 N N23 WFJ . . . C 3 -10.375 16.612 15.817 1 20.23 ? N23 WFJ 202 A 1 HETATM 29 O O11 WFJ . . . C 3 -6.056 13.668 13.226 1 8.52 ? O11 WFJ 202 A 1 HETATM 30 O O30 WFJ . . . C 3 -15.046 14.241 15.691 1 17.89 ? O30 WFJ 202 A 1 HETATM 31 O O31 WFJ . . . C 3 -13.487 13.303 14.398 1 18.46 ? O31 WFJ 202 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #