data_7KID # _model_server_result.job_id t_gNsIpcKY8bJiwgfOOhlQ _model_server_result.datetime_utc '2025-07-06 22:31:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kid # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 7KID # _exptl.entry_id 7KID _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KID _cell.length_a 103.678 _cell.length_b 139.177 _cell.length_c 178.883 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KID _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 216 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 208 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 255 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 247 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.036 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7KID _atom_sites.fract_transf_matrix[1][1] 0.009645 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007185 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 701 1 EDO EDO . D 3 EDO A 1 702 2 EDO EDO . E 3 EDO A 1 703 3 EDO EDO . F 3 EDO A 1 704 4 EDO EDO . G 4 WFV A 1 705 1 WFV LIG . H 5 HOH A 1 801 80 HOH HOH . H 5 HOH A 2 802 84 HOH HOH . H 5 HOH A 3 803 81 HOH HOH . H 5 HOH A 4 804 75 HOH HOH . H 5 HOH A 5 805 50 HOH HOH . H 5 HOH A 6 806 166 HOH HOH . H 5 HOH A 7 807 220 HOH HOH . H 5 HOH A 8 808 60 HOH HOH . H 5 HOH A 9 809 119 HOH HOH . H 5 HOH A 10 810 259 HOH HOH . H 5 HOH A 11 811 65 HOH HOH . H 5 HOH A 12 812 9 HOH HOH . H 5 HOH A 13 813 42 HOH HOH . H 5 HOH A 14 814 40 HOH HOH . H 5 HOH A 15 815 188 HOH HOH . H 5 HOH A 16 816 22 HOH HOH . H 5 HOH A 17 817 145 HOH HOH . H 5 HOH A 18 818 5 HOH HOH . H 5 HOH A 19 819 3 HOH HOH . H 5 HOH A 20 820 67 HOH HOH . H 5 HOH A 21 821 79 HOH HOH . H 5 HOH A 22 822 94 HOH HOH . H 5 HOH A 23 823 15 HOH HOH . H 5 HOH A 24 824 27 HOH HOH . H 5 HOH A 25 825 104 HOH HOH . H 5 HOH A 26 826 48 HOH HOH . H 5 HOH A 27 827 223 HOH HOH . H 5 HOH A 28 828 251 HOH HOH . H 5 HOH A 29 829 57 HOH HOH . H 5 HOH A 30 830 210 HOH HOH . H 5 HOH A 31 831 131 HOH HOH . H 5 HOH A 32 832 146 HOH HOH . H 5 HOH A 33 833 102 HOH HOH . H 5 HOH A 34 834 2 HOH HOH . H 5 HOH A 35 835 214 HOH HOH . H 5 HOH A 36 836 203 HOH HOH . H 5 HOH A 37 837 86 HOH HOH . H 5 HOH A 38 838 59 HOH HOH . H 5 HOH A 39 839 83 HOH HOH . H 5 HOH A 40 840 37 HOH HOH . H 5 HOH A 41 841 172 HOH HOH . H 5 HOH A 42 842 8 HOH HOH . H 5 HOH A 43 843 195 HOH HOH . H 5 HOH A 44 844 21 HOH HOH . H 5 HOH A 45 845 1 HOH HOH . H 5 HOH A 46 846 35 HOH HOH . H 5 HOH A 47 847 254 HOH HOH . H 5 HOH A 48 848 10 HOH HOH . H 5 HOH A 49 849 47 HOH HOH . H 5 HOH A 50 850 245 HOH HOH . H 5 HOH A 51 851 199 HOH HOH . H 5 HOH A 52 852 139 HOH HOH . H 5 HOH A 53 853 237 HOH HOH . H 5 HOH A 54 854 110 HOH HOH . H 5 HOH A 55 855 197 HOH HOH . H 5 HOH A 56 856 260 HOH HOH . H 5 HOH A 57 857 128 HOH HOH . H 5 HOH A 58 858 153 HOH HOH . H 5 HOH A 59 859 221 HOH HOH . H 5 HOH A 60 860 4 HOH HOH . H 5 HOH A 61 861 105 HOH HOH . H 5 HOH A 62 862 17 HOH HOH . H 5 HOH A 63 863 206 HOH HOH . H 5 HOH A 64 864 218 HOH HOH . H 5 HOH A 65 865 39 HOH HOH . H 5 HOH A 66 866 187 HOH HOH . H 5 HOH A 67 867 224 HOH HOH . H 5 HOH A 68 868 18 HOH HOH . H 5 HOH A 69 869 28 HOH HOH . H 5 HOH A 70 870 252 HOH HOH . H 5 HOH A 71 871 209 HOH HOH . H 5 HOH A 72 872 92 HOH HOH . H 5 HOH A 73 873 163 HOH HOH . H 5 HOH A 74 874 107 HOH HOH . H 5 HOH A 75 875 70 HOH HOH . H 5 HOH A 76 876 63 HOH HOH . H 5 HOH A 77 877 13 HOH HOH . H 5 HOH A 78 878 12 HOH HOH . H 5 HOH A 79 879 108 HOH HOH . H 5 HOH A 80 880 192 HOH HOH . H 5 HOH A 81 881 25 HOH HOH . H 5 HOH A 82 882 53 HOH HOH . H 5 HOH A 83 883 141 HOH HOH . H 5 HOH A 84 884 150 HOH HOH . H 5 HOH A 85 885 34 HOH HOH . H 5 HOH A 86 886 103 HOH HOH . H 5 HOH A 87 887 73 HOH HOH . H 5 HOH A 88 888 33 HOH HOH . H 5 HOH A 89 889 184 HOH HOH . H 5 HOH A 90 890 112 HOH HOH . H 5 HOH A 91 891 152 HOH HOH . H 5 HOH A 92 892 185 HOH HOH . H 5 HOH A 93 893 171 HOH HOH . H 5 HOH A 94 894 6 HOH HOH . H 5 HOH A 95 895 174 HOH HOH . H 5 HOH A 96 896 55 HOH HOH . H 5 HOH A 97 897 56 HOH HOH . H 5 HOH A 98 898 167 HOH HOH . H 5 HOH A 99 899 89 HOH HOH . H 5 HOH A 100 900 160 HOH HOH . H 5 HOH A 101 901 23 HOH HOH . H 5 HOH A 102 902 45 HOH HOH . H 5 HOH A 103 903 98 HOH HOH . H 5 HOH A 104 904 212 HOH HOH . H 5 HOH A 105 905 144 HOH HOH . H 5 HOH A 106 906 36 HOH HOH . H 5 HOH A 107 907 243 HOH HOH . H 5 HOH A 108 908 64 HOH HOH . H 5 HOH A 109 909 204 HOH HOH . H 5 HOH A 110 910 30 HOH HOH . H 5 HOH A 111 911 88 HOH HOH . H 5 HOH A 112 912 87 HOH HOH . H 5 HOH A 113 913 101 HOH HOH . H 5 HOH A 114 914 258 HOH HOH . H 5 HOH A 115 915 14 HOH HOH . H 5 HOH A 116 916 217 HOH HOH . H 5 HOH A 117 917 20 HOH HOH . H 5 HOH A 118 918 151 HOH HOH . H 5 HOH A 119 919 32 HOH HOH . H 5 HOH A 120 920 161 HOH HOH . H 5 HOH A 121 921 95 HOH HOH . H 5 HOH A 122 922 143 HOH HOH . H 5 HOH A 123 923 77 HOH HOH . H 5 HOH A 124 924 46 HOH HOH . H 5 HOH A 125 925 198 HOH HOH . H 5 HOH A 126 926 158 HOH HOH . H 5 HOH A 127 927 189 HOH HOH . H 5 HOH A 128 928 52 HOH HOH . H 5 HOH A 129 929 253 HOH HOH . H 5 HOH A 130 930 16 HOH HOH . H 5 HOH A 131 931 154 HOH HOH . H 5 HOH A 132 932 106 HOH HOH . H 5 HOH A 133 933 249 HOH HOH . H 5 HOH A 134 934 90 HOH HOH . H 5 HOH A 135 935 24 HOH HOH . H 5 HOH A 136 936 142 HOH HOH . H 5 HOH A 137 937 130 HOH HOH . H 5 HOH A 138 938 147 HOH HOH . H 5 HOH A 139 939 99 HOH HOH . H 5 HOH A 140 940 96 HOH HOH . H 5 HOH A 141 941 156 HOH HOH . H 5 HOH A 142 942 31 HOH HOH . H 5 HOH A 143 943 196 HOH HOH . H 5 HOH A 144 944 238 HOH HOH . H 5 HOH A 145 945 179 HOH HOH . H 5 HOH A 146 946 116 HOH HOH . H 5 HOH A 147 947 66 HOH HOH . H 5 HOH A 148 948 109 HOH HOH . H 5 HOH A 149 949 170 HOH HOH . H 5 HOH A 150 950 177 HOH HOH . H 5 HOH A 151 951 240 HOH HOH . H 5 HOH A 152 952 114 HOH HOH . H 5 HOH A 153 953 140 HOH HOH . H 5 HOH A 154 954 234 HOH HOH . H 5 HOH A 155 955 29 HOH HOH . H 5 HOH A 156 956 256 HOH HOH . H 5 HOH A 157 957 118 HOH HOH . H 5 HOH A 158 958 72 HOH HOH . H 5 HOH A 159 959 11 HOH HOH . H 5 HOH A 160 960 91 HOH HOH . H 5 HOH A 161 961 129 HOH HOH . H 5 HOH A 162 962 233 HOH HOH . H 5 HOH A 163 963 193 HOH HOH . H 5 HOH A 164 964 257 HOH HOH . H 5 HOH A 165 965 231 HOH HOH . H 5 HOH A 166 966 191 HOH HOH . H 5 HOH A 167 967 54 HOH HOH . H 5 HOH A 168 968 78 HOH HOH . H 5 HOH A 169 969 235 HOH HOH . H 5 HOH A 170 970 76 HOH HOH . H 5 HOH A 171 971 51 HOH HOH . H 5 HOH A 172 972 136 HOH HOH . H 5 HOH A 173 973 159 HOH HOH . H 5 HOH A 174 974 100 HOH HOH . H 5 HOH A 175 975 246 HOH HOH . H 5 HOH A 176 976 164 HOH HOH . H 5 HOH A 177 977 68 HOH HOH . H 5 HOH A 178 978 44 HOH HOH . H 5 HOH A 179 979 190 HOH HOH . H 5 HOH A 180 980 241 HOH HOH . H 5 HOH A 181 981 120 HOH HOH . H 5 HOH A 182 982 213 HOH HOH . H 5 HOH A 183 983 175 HOH HOH . H 5 HOH A 184 984 182 HOH HOH . H 5 HOH A 185 985 183 HOH HOH . H 5 HOH A 186 986 157 HOH HOH . H 5 HOH A 187 987 181 HOH HOH . H 5 HOH A 188 988 173 HOH HOH . H 5 HOH A 189 989 121 HOH HOH . H 5 HOH A 190 990 250 HOH HOH . H 5 HOH A 191 991 236 HOH HOH . H 5 HOH A 192 992 208 HOH HOH . H 5 HOH A 193 993 38 HOH HOH . H 5 HOH A 194 994 255 HOH HOH . H 5 HOH A 195 995 58 HOH HOH . H 5 HOH A 196 996 85 HOH HOH . H 5 HOH A 197 997 69 HOH HOH . H 5 HOH A 198 998 211 HOH HOH . H 5 HOH A 199 999 165 HOH HOH . H 5 HOH A 200 1000 239 HOH HOH . H 5 HOH A 201 1001 149 HOH HOH . H 5 HOH A 202 1002 97 HOH HOH . H 5 HOH A 203 1003 137 HOH HOH . H 5 HOH A 204 1004 222 HOH HOH . H 5 HOH A 205 1005 82 HOH HOH . H 5 HOH A 206 1006 162 HOH HOH . H 5 HOH A 207 1007 232 HOH HOH . H 5 HOH A 208 1008 242 HOH HOH . H 5 HOH A 209 1009 178 HOH HOH . H 5 HOH A 210 1010 219 HOH HOH . H 5 HOH A 211 1011 228 HOH HOH . H 5 HOH A 212 1012 62 HOH HOH . H 5 HOH A 213 1013 180 HOH HOH . H 5 HOH A 214 1014 115 HOH HOH . H 5 HOH A 215 1015 176 HOH HOH . H 5 HOH A 216 1016 155 HOH HOH . H 5 HOH A 217 1017 207 HOH HOH . H 5 HOH A 218 1018 117 HOH HOH . H 5 HOH A 219 1019 132 HOH HOH . H 5 HOH A 220 1020 113 HOH HOH . H 5 HOH A 221 1021 168 HOH HOH . H 5 HOH A 222 1022 169 HOH HOH . H 5 HOH A 223 1023 244 HOH HOH . I 5 HOH B 1 401 43 HOH HOH . I 5 HOH B 2 402 138 HOH HOH . I 5 HOH B 3 403 186 HOH HOH . I 5 HOH B 4 404 135 HOH HOH . I 5 HOH B 5 405 49 HOH HOH . I 5 HOH B 6 406 71 HOH HOH . I 5 HOH B 7 407 215 HOH HOH . I 5 HOH B 8 408 111 HOH HOH . I 5 HOH B 9 409 227 HOH HOH . I 5 HOH B 10 410 248 HOH HOH . I 5 HOH B 11 411 41 HOH HOH . I 5 HOH B 12 412 93 HOH HOH . I 5 HOH B 13 413 123 HOH HOH . I 5 HOH B 14 414 201 HOH HOH . I 5 HOH B 15 415 229 HOH HOH . I 5 HOH B 16 416 226 HOH HOH . I 5 HOH B 17 417 127 HOH HOH . I 5 HOH B 18 418 200 HOH HOH . I 5 HOH B 19 419 7 HOH HOH . I 5 HOH B 20 420 124 HOH HOH . I 5 HOH B 21 421 225 HOH HOH . I 5 HOH B 22 422 19 HOH HOH . I 5 HOH B 23 423 74 HOH HOH . I 5 HOH B 24 424 216 HOH HOH . I 5 HOH B 25 425 26 HOH HOH . I 5 HOH B 26 426 247 HOH HOH . I 5 HOH B 27 427 194 HOH HOH . I 5 HOH B 28 428 122 HOH HOH . I 5 HOH B 29 429 133 HOH HOH . I 5 HOH B 30 430 205 HOH HOH . I 5 HOH B 31 431 230 HOH HOH . I 5 HOH B 32 432 125 HOH HOH . I 5 HOH B 33 433 202 HOH HOH . I 5 HOH B 34 434 61 HOH HOH . I 5 HOH B 35 435 134 HOH HOH . I 5 HOH B 36 436 148 HOH HOH . I 5 HOH B 37 437 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 31.389 -46.228 2.195 1 48.12 ? C1 EDO 703 A 1 HETATM 2 O O1 EDO . . . E 3 30.425 -47.069 2.792 1 48.05 ? O1 EDO 703 A 1 HETATM 3 C C2 EDO . . . E 3 31.9 -45.221 3.243 1 48.12 ? C2 EDO 703 A 1 HETATM 4 O O2 EDO . . . E 3 32.876 -44.382 2.652 1 48.18 ? O2 EDO 703 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #