data_7KIR # _model_server_result.job_id beWFI9LJeByO-A9Tycq33g _model_server_result.datetime_utc '2024-11-17 23:39:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kir # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 7KIR # _exptl.entry_id 7KIR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KIR _cell.length_a 51.437 _cell.length_b 51.437 _cell.length_c 142.938 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KIR _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall 'P 4w' _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 79 A GLU 79 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc2 A OD2 ASP 153 A ASP 153 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc3 A OD1 ASP 153 A ASP 153 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc4 A O ILE 155 A ILE 155 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc5 A OD1 ASP 156 A ASP 156 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc6 A OD1 ASP 317 A ASP 317 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc7 B O1 2IP . A 2IP 501 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc8 B O11 2IP . A 2IP 501 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc9 B O11 2IP . A 2IP 501 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc10 C CA CA . A CA 502 1_555 E O HOH . A HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc11 D CA CA . A CA 503 1_555 E O HOH . A HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc12 D CA CA . A CA 503 1_555 E O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7KIR _atom_sites.fract_transf_matrix[1][1] 0.019441 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019441 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006996 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2IP A 1 501 786 2IP 2IP . C 3 CA A 1 502 501 CA CA . D 3 CA A 1 503 502 CA CA . E 4 HOH A 1 601 23 HOH HOH . E 4 HOH A 2 602 4 HOH HOH . E 4 HOH A 3 603 5 HOH HOH . E 4 HOH A 4 604 14 HOH HOH . E 4 HOH A 5 605 22 HOH HOH . E 4 HOH A 6 606 20 HOH HOH . E 4 HOH A 7 607 12 HOH HOH . E 4 HOH A 8 608 7 HOH HOH . E 4 HOH A 9 609 6 HOH HOH . E 4 HOH A 10 610 8 HOH HOH . E 4 HOH A 11 611 3 HOH HOH . E 4 HOH A 12 612 16 HOH HOH . E 4 HOH A 13 613 10 HOH HOH . E 4 HOH A 14 614 18 HOH HOH . E 4 HOH A 15 615 13 HOH HOH . E 4 HOH A 16 616 1 HOH HOH . E 4 HOH A 17 617 19 HOH HOH . E 4 HOH A 18 618 11 HOH HOH . E 4 HOH A 19 619 9 HOH HOH . E 4 HOH A 20 620 17 HOH HOH . E 4 HOH A 21 621 2 HOH HOH . E 4 HOH A 22 622 21 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -6.733 _atom_site.Cartn_y 12.727 _atom_site.Cartn_z 35.86 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #