data_7KIV # _model_server_result.job_id IrCgAWH0ZCxxAd_5MUe9Gg _model_server_result.datetime_utc '2024-11-15 13:28:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kiv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 7KIV # _exptl.entry_id 7KIV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 267.26 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KIV _cell.length_a 67.878 _cell.length_b 80.073 _cell.length_c 87.793 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KIV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 294 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 294 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CAN _struct_conn.ptnr2_label_comp_id NXL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NXL _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.401 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C7 H13 N3 O6 S' _chem_comp.formula_weight 267.26 _chem_comp.id NXL _chem_comp.mon_nstd_flag . _chem_comp.name (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'avibactam, bound form;NXL104, bound form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAK CAO NXL sing 237 n n CAJ CAO NXL sing 238 n n CAJ N NXL sing 239 n n OAL SAR NXL sing 240 n n CAO CAH NXL sing 241 n n CAN N NXL sing 242 n n CAN OAC NXL doub 243 n n OAG SAR NXL doub 244 n n N CA NXL sing 245 n n SAR OAE NXL doub 246 n n SAR OAD NXL sing 247 n n O C NXL doub 248 n n CAH CB NXL sing 249 n n CA C NXL sing 250 n n CA CB NXL sing 251 n n C NAA NXL sing 252 n n NAK OAL NXL sing 253 n n CAN H1 NXL sing 254 n n CAJ H2 NXL sing 255 n n CAJ H3 NXL sing 256 n n CA H4 NXL sing 257 n n NAA H5 NXL sing 258 n n NAA H6 NXL sing 259 n n CB H7 NXL sing 260 n n CB H8 NXL sing 261 n n CAH H9 NXL sing 262 n n CAH H10 NXL sing 263 n n CAO H11 NXL sing 264 n n NAK H12 NXL sing 265 n n OAD H13 NXL sing 266 n n # _atom_sites.entry_id 7KIV _atom_sites.fract_transf_matrix[1][1] 0.014732 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012489 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NXL A 1 601 1 NXL LIG . C 3 HOH A 1 701 130 HOH HOH . C 3 HOH A 2 702 157 HOH HOH . C 3 HOH A 3 703 155 HOH HOH . C 3 HOH A 4 704 46 HOH HOH . C 3 HOH A 5 705 143 HOH HOH . C 3 HOH A 6 706 75 HOH HOH . C 3 HOH A 7 707 149 HOH HOH . C 3 HOH A 8 708 91 HOH HOH . C 3 HOH A 9 709 87 HOH HOH . C 3 HOH A 10 710 49 HOH HOH . C 3 HOH A 11 711 151 HOH HOH . C 3 HOH A 12 712 67 HOH HOH . C 3 HOH A 13 713 133 HOH HOH . C 3 HOH A 14 714 33 HOH HOH . C 3 HOH A 15 715 76 HOH HOH . C 3 HOH A 16 716 129 HOH HOH . C 3 HOH A 17 717 158 HOH HOH . C 3 HOH A 18 718 79 HOH HOH . C 3 HOH A 19 719 1 HOH HOH . C 3 HOH A 20 720 57 HOH HOH . C 3 HOH A 21 721 42 HOH HOH . C 3 HOH A 22 722 80 HOH HOH . C 3 HOH A 23 723 154 HOH HOH . C 3 HOH A 24 724 92 HOH HOH . C 3 HOH A 25 725 131 HOH HOH . C 3 HOH A 26 726 51 HOH HOH . C 3 HOH A 27 727 156 HOH HOH . C 3 HOH A 28 728 106 HOH HOH . C 3 HOH A 29 729 44 HOH HOH . C 3 HOH A 30 730 19 HOH HOH . C 3 HOH A 31 731 15 HOH HOH . C 3 HOH A 32 732 116 HOH HOH . C 3 HOH A 33 733 147 HOH HOH . C 3 HOH A 34 734 108 HOH HOH . C 3 HOH A 35 735 153 HOH HOH . C 3 HOH A 36 736 71 HOH HOH . C 3 HOH A 37 737 66 HOH HOH . C 3 HOH A 38 738 47 HOH HOH . C 3 HOH A 39 739 88 HOH HOH . C 3 HOH A 40 740 139 HOH HOH . C 3 HOH A 41 741 2 HOH HOH . C 3 HOH A 42 742 146 HOH HOH . C 3 HOH A 43 743 84 HOH HOH . C 3 HOH A 44 744 53 HOH HOH . C 3 HOH A 45 745 125 HOH HOH . C 3 HOH A 46 746 81 HOH HOH . C 3 HOH A 47 747 63 HOH HOH . C 3 HOH A 48 748 85 HOH HOH . C 3 HOH A 49 749 45 HOH HOH . C 3 HOH A 50 750 148 HOH HOH . C 3 HOH A 51 751 68 HOH HOH . C 3 HOH A 52 752 28 HOH HOH . C 3 HOH A 53 753 37 HOH HOH . C 3 HOH A 54 754 107 HOH HOH . C 3 HOH A 55 755 55 HOH HOH . C 3 HOH A 56 756 59 HOH HOH . C 3 HOH A 57 757 60 HOH HOH . C 3 HOH A 58 758 77 HOH HOH . C 3 HOH A 59 759 93 HOH HOH . C 3 HOH A 60 760 138 HOH HOH . C 3 HOH A 61 761 70 HOH HOH . C 3 HOH A 62 762 136 HOH HOH . C 3 HOH A 63 763 74 HOH HOH . C 3 HOH A 64 764 3 HOH HOH . C 3 HOH A 65 765 132 HOH HOH . C 3 HOH A 66 766 144 HOH HOH . C 3 HOH A 67 767 105 HOH HOH . C 3 HOH A 68 768 115 HOH HOH . C 3 HOH A 69 769 118 HOH HOH . C 3 HOH A 70 770 83 HOH HOH . C 3 HOH A 71 771 82 HOH HOH . C 3 HOH A 72 772 109 HOH HOH . C 3 HOH A 73 773 112 HOH HOH . C 3 HOH A 74 774 78 HOH HOH . C 3 HOH A 75 775 69 HOH HOH . C 3 HOH A 76 776 100 HOH HOH . C 3 HOH A 77 777 141 HOH HOH . C 3 HOH A 78 778 52 HOH HOH . C 3 HOH A 79 779 65 HOH HOH . C 3 HOH A 80 780 97 HOH HOH . C 3 HOH A 81 781 72 HOH HOH . C 3 HOH A 82 782 145 HOH HOH . C 3 HOH A 83 783 137 HOH HOH . C 3 HOH A 84 784 140 HOH HOH . C 3 HOH A 85 785 134 HOH HOH . C 3 HOH A 86 786 62 HOH HOH . C 3 HOH A 87 787 40 HOH HOH . C 3 HOH A 88 788 6 HOH HOH . C 3 HOH A 89 789 86 HOH HOH . C 3 HOH A 90 790 150 HOH HOH . C 3 HOH A 91 791 121 HOH HOH . C 3 HOH A 92 792 123 HOH HOH . C 3 HOH A 93 793 142 HOH HOH . C 3 HOH A 94 794 54 HOH HOH . C 3 HOH A 95 795 152 HOH HOH . C 3 HOH A 96 796 113 HOH HOH . C 3 HOH A 97 797 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC NXL . . . B 2 6.935 35.305 15.254 1 29.8 ? OAC NXL 601 A 1 HETATM 2 C CAN NXL . . . B 2 6.888 35.663 16.435 1 31.62 ? CAN NXL 601 A 1 HETATM 3 N N NXL . . . B 2 7.165 36.88 16.885 1 36.79 ? N NXL 601 A 1 HETATM 4 C CAJ NXL . . . B 2 7.057 37.174 18.348 1 34.52 ? CAJ NXL 601 A 1 HETATM 5 C CA NXL . . . B 2 7.468 37.977 15.948 1 37.54 ? CA NXL 601 A 1 HETATM 6 C C NXL . . . B 2 8.61 38.767 16.266 1 39.13 ? C NXL 601 A 1 HETATM 7 O O NXL . . . B 2 9.44 38.564 17.202 1 35.03 ? O NXL 601 A 1 HETATM 8 N NAA NXL . . . B 2 8.769 39.834 15.453 1 43.42 ? NAA NXL 601 A 1 HETATM 9 C CB NXL . . . B 2 6.139 38.764 15.857 1 38.11 ? CB NXL 601 A 1 HETATM 10 C CAH NXL . . . B 2 5.708 39.171 17.299 1 41.24 ? CAH NXL 601 A 1 HETATM 11 C CAO NXL . . . B 2 5.802 38.012 18.374 1 37.43 ? CAO NXL 601 A 1 HETATM 12 N NAK NXL . . . B 2 4.629 37.115 18.275 1 39.5 ? NAK NXL 601 A 1 HETATM 13 O OAL NXL . . . B 2 3.398 37.609 17.678 1 51.16 ? OAL NXL 601 A 1 HETATM 14 S SAR NXL . . . B 2 2.417 36.752 16.867 1 48.1 ? SAR NXL 601 A 1 HETATM 15 O OAD NXL . . . B 2 1.638 35.928 17.846 1 48.34 ? OAD NXL 601 A 1 HETATM 16 O OAE NXL . . . B 2 3.324 35.812 16.074 1 42.57 -1 OAE NXL 601 A 1 HETATM 17 O OAG NXL . . . B 2 1.571 37.543 15.861 1 49.05 ? OAG NXL 601 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 426 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 17 #