data_7KJG # _model_server_result.job_id sqyqw9m6hJdCRnxySru89g _model_server_result.datetime_utc '2024-11-28 20:21:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kjg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7KJG # _exptl.entry_id 7KJG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.81 _cell.angle_gamma 90 _cell.entry_id 7KJG _cell.length_a 51.62 _cell.length_b 46.95 _cell.length_c 75.12 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KJG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 120 A ASP 99 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc2 A OD2 ASP 120 A ASP 99 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc3 A OD1 ASN 261 A ASN 240 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc4 A OG SER 265 A SER 244 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc5 A OE2 GLU 269 A GLU 248 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc6 B MG MG . A MG 401 1_555 E O2 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc7 B MG MG . A MG 401 1_555 I O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc8 B MG MG . A MG 401 1_555 I O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc9 B MG MG . A MG 401 1_555 I O HOH . A HOH 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc10 B MG MG . A MG 401 1_555 I O HOH . A HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc11 C MG MG . A MG 402 1_555 E O1 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc12 C MG MG . A MG 402 1_555 E O4 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc13 C MG MG . A MG 402 1_555 I O HOH . A HOH 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc14 D MG MG . A MG 403 1_555 E O2 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc15 D MG MG . A MG 403 1_555 E O6 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc16 D MG MG . A MG 403 1_555 I O HOH . A HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc17 D MG MG . A MG 403 1_555 I O HOH . A HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc18 D MG MG . A MG 403 1_555 I O HOH . A HOH 579 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7KJG _atom_sites.fract_transf_matrix[1][1] 0.019372 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002657 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 401 1 MG MG . C 2 MG A 1 402 2 MG MG . D 2 MG A 1 403 3 MG MG . E 3 POP A 1 404 1 POP POP . F 4 SO4 A 1 405 1 SO4 SO4 . G 5 BTM A 1 406 1 BTM BTM . H 6 GOL A 1 407 1 GOL GOL . I 7 HOH A 1 501 178 HOH HOH . I 7 HOH A 2 502 12 HOH HOH . I 7 HOH A 3 503 103 HOH HOH . I 7 HOH A 4 504 118 HOH HOH . I 7 HOH A 5 505 81 HOH HOH . I 7 HOH A 6 506 149 HOH HOH . I 7 HOH A 7 507 295 HOH HOH . I 7 HOH A 8 508 111 HOH HOH . I 7 HOH A 9 509 143 HOH HOH . I 7 HOH A 10 510 63 HOH HOH . I 7 HOH A 11 511 19 HOH HOH . I 7 HOH A 12 512 188 HOH HOH . I 7 HOH A 13 513 10 HOH HOH . I 7 HOH A 14 514 228 HOH HOH . I 7 HOH A 15 515 123 HOH HOH . I 7 HOH A 16 516 304 HOH HOH . I 7 HOH A 17 517 211 HOH HOH . I 7 HOH A 18 518 305 HOH HOH . I 7 HOH A 19 519 69 HOH HOH . I 7 HOH A 20 520 39 HOH HOH . I 7 HOH A 21 521 119 HOH HOH . I 7 HOH A 22 522 35 HOH HOH . I 7 HOH A 23 523 210 HOH HOH . I 7 HOH A 24 524 76 HOH HOH . I 7 HOH A 25 525 13 HOH HOH . I 7 HOH A 26 526 217 HOH HOH . I 7 HOH A 27 527 83 HOH HOH . I 7 HOH A 28 528 8 HOH HOH . I 7 HOH A 29 529 105 HOH HOH . I 7 HOH A 30 530 94 HOH HOH . I 7 HOH A 31 531 11 HOH HOH . I 7 HOH A 32 532 41 HOH HOH . I 7 HOH A 33 533 51 HOH HOH . I 7 HOH A 34 534 50 HOH HOH . I 7 HOH A 35 535 40 HOH HOH . I 7 HOH A 36 536 162 HOH HOH . I 7 HOH A 37 537 18 HOH HOH . I 7 HOH A 38 538 22 HOH HOH . I 7 HOH A 39 539 15 HOH HOH . I 7 HOH A 40 540 82 HOH HOH . I 7 HOH A 41 541 26 HOH HOH . I 7 HOH A 42 542 48 HOH HOH . I 7 HOH A 43 543 21 HOH HOH . I 7 HOH A 44 544 46 HOH HOH . I 7 HOH A 45 545 59 HOH HOH . I 7 HOH A 46 546 282 HOH HOH . I 7 HOH A 47 547 20 HOH HOH . I 7 HOH A 48 548 49 HOH HOH . I 7 HOH A 49 549 87 HOH HOH . I 7 HOH A 50 550 28 HOH HOH . I 7 HOH A 51 551 107 HOH HOH . I 7 HOH A 52 552 58 HOH HOH . I 7 HOH A 53 553 32 HOH HOH . I 7 HOH A 54 554 54 HOH HOH . I 7 HOH A 55 555 34 HOH HOH . I 7 HOH A 56 556 109 HOH HOH . I 7 HOH A 57 557 90 HOH HOH . I 7 HOH A 58 558 287 HOH HOH . I 7 HOH A 59 559 55 HOH HOH . I 7 HOH A 60 560 30 HOH HOH . I 7 HOH A 61 561 292 HOH HOH . I 7 HOH A 62 562 218 HOH HOH . I 7 HOH A 63 563 92 HOH HOH . I 7 HOH A 64 564 132 HOH HOH . I 7 HOH A 65 565 29 HOH HOH . I 7 HOH A 66 566 308 HOH HOH . I 7 HOH A 67 567 74 HOH HOH . I 7 HOH A 68 568 78 HOH HOH . I 7 HOH A 69 569 310 HOH HOH . I 7 HOH A 70 570 322 HOH HOH . I 7 HOH A 71 571 23 HOH HOH . I 7 HOH A 72 572 142 HOH HOH . I 7 HOH A 73 573 224 HOH HOH . I 7 HOH A 74 574 9 HOH HOH . I 7 HOH A 75 575 120 HOH HOH . I 7 HOH A 76 576 306 HOH HOH . I 7 HOH A 77 577 133 HOH HOH . I 7 HOH A 78 578 42 HOH HOH . I 7 HOH A 79 579 16 HOH HOH . I 7 HOH A 80 580 169 HOH HOH . I 7 HOH A 81 581 71 HOH HOH . I 7 HOH A 82 582 267 HOH HOH . I 7 HOH A 83 583 148 HOH HOH . I 7 HOH A 84 584 102 HOH HOH . I 7 HOH A 85 585 25 HOH HOH . I 7 HOH A 86 586 52 HOH HOH . I 7 HOH A 87 587 205 HOH HOH . I 7 HOH A 88 588 85 HOH HOH . I 7 HOH A 89 589 6 HOH HOH . I 7 HOH A 90 590 153 HOH HOH . I 7 HOH A 91 591 152 HOH HOH . I 7 HOH A 92 592 14 HOH HOH . I 7 HOH A 93 593 79 HOH HOH . I 7 HOH A 94 594 140 HOH HOH . I 7 HOH A 95 595 70 HOH HOH . I 7 HOH A 96 596 158 HOH HOH . I 7 HOH A 97 597 56 HOH HOH . I 7 HOH A 98 598 96 HOH HOH . I 7 HOH A 99 599 17 HOH HOH . I 7 HOH A 100 600 67 HOH HOH . I 7 HOH A 101 601 104 HOH HOH . I 7 HOH A 102 602 189 HOH HOH . I 7 HOH A 103 603 116 HOH HOH . I 7 HOH A 104 604 171 HOH HOH . I 7 HOH A 105 605 145 HOH HOH . I 7 HOH A 106 606 220 HOH HOH . I 7 HOH A 107 607 64 HOH HOH . I 7 HOH A 108 608 47 HOH HOH . I 7 HOH A 109 609 93 HOH HOH . I 7 HOH A 110 610 214 HOH HOH . I 7 HOH A 111 611 98 HOH HOH . I 7 HOH A 112 612 307 HOH HOH . I 7 HOH A 113 613 110 HOH HOH . I 7 HOH A 114 614 36 HOH HOH . I 7 HOH A 115 615 72 HOH HOH . I 7 HOH A 116 616 84 HOH HOH . I 7 HOH A 117 617 309 HOH HOH . I 7 HOH A 118 618 190 HOH HOH . I 7 HOH A 119 619 293 HOH HOH . I 7 HOH A 120 620 97 HOH HOH . I 7 HOH A 121 621 77 HOH HOH . I 7 HOH A 122 622 73 HOH HOH . I 7 HOH A 123 623 89 HOH HOH . I 7 HOH A 124 624 184 HOH HOH . I 7 HOH A 125 625 151 HOH HOH . I 7 HOH A 126 626 44 HOH HOH . I 7 HOH A 127 627 126 HOH HOH . I 7 HOH A 128 628 183 HOH HOH . I 7 HOH A 129 629 7 HOH HOH . I 7 HOH A 130 630 258 HOH HOH . I 7 HOH A 131 631 122 HOH HOH . I 7 HOH A 132 632 75 HOH HOH . I 7 HOH A 133 633 43 HOH HOH . I 7 HOH A 134 634 320 HOH HOH . I 7 HOH A 135 635 60 HOH HOH . I 7 HOH A 136 636 24 HOH HOH . I 7 HOH A 137 637 38 HOH HOH . I 7 HOH A 138 638 160 HOH HOH . I 7 HOH A 139 639 170 HOH HOH . I 7 HOH A 140 640 80 HOH HOH . I 7 HOH A 141 641 95 HOH HOH . I 7 HOH A 142 642 68 HOH HOH . I 7 HOH A 143 643 130 HOH HOH . I 7 HOH A 144 644 37 HOH HOH . I 7 HOH A 145 645 45 HOH HOH . I 7 HOH A 146 646 101 HOH HOH . I 7 HOH A 147 647 88 HOH HOH . I 7 HOH A 148 648 57 HOH HOH . I 7 HOH A 149 649 243 HOH HOH . I 7 HOH A 150 650 91 HOH HOH . I 7 HOH A 151 651 66 HOH HOH . I 7 HOH A 152 652 100 HOH HOH . I 7 HOH A 153 653 318 HOH HOH . I 7 HOH A 154 654 131 HOH HOH . I 7 HOH A 155 655 146 HOH HOH . I 7 HOH A 156 656 164 HOH HOH . I 7 HOH A 157 657 106 HOH HOH . I 7 HOH A 158 658 128 HOH HOH . I 7 HOH A 159 659 219 HOH HOH . I 7 HOH A 160 660 53 HOH HOH . I 7 HOH A 161 661 121 HOH HOH . I 7 HOH A 162 662 278 HOH HOH . I 7 HOH A 163 663 159 HOH HOH . I 7 HOH A 164 664 31 HOH HOH . I 7 HOH A 165 665 323 HOH HOH . I 7 HOH A 166 666 231 HOH HOH . I 7 HOH A 167 667 27 HOH HOH . I 7 HOH A 168 668 173 HOH HOH . I 7 HOH A 169 669 248 HOH HOH . I 7 HOH A 170 670 291 HOH HOH . I 7 HOH A 171 671 108 HOH HOH . I 7 HOH A 172 672 99 HOH HOH . I 7 HOH A 173 673 277 HOH HOH . I 7 HOH A 174 674 181 HOH HOH . I 7 HOH A 175 675 165 HOH HOH . I 7 HOH A 176 676 176 HOH HOH . I 7 HOH A 177 677 127 HOH HOH . I 7 HOH A 178 678 182 HOH HOH . I 7 HOH A 179 679 187 HOH HOH . I 7 HOH A 180 680 114 HOH HOH . I 7 HOH A 181 681 180 HOH HOH . I 7 HOH A 182 682 65 HOH HOH . I 7 HOH A 183 683 296 HOH HOH . I 7 HOH A 184 684 172 HOH HOH . I 7 HOH A 185 685 302 HOH HOH . I 7 HOH A 186 686 135 HOH HOH . I 7 HOH A 187 687 136 HOH HOH . I 7 HOH A 188 688 319 HOH HOH . I 7 HOH A 189 689 125 HOH HOH . I 7 HOH A 190 690 33 HOH HOH . I 7 HOH A 191 691 147 HOH HOH . I 7 HOH A 192 692 294 HOH HOH . I 7 HOH A 193 693 236 HOH HOH . I 7 HOH A 194 694 179 HOH HOH . I 7 HOH A 195 695 129 HOH HOH . I 7 HOH A 196 696 276 HOH HOH . I 7 HOH A 197 697 112 HOH HOH . I 7 HOH A 198 698 124 HOH HOH . I 7 HOH A 199 699 156 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.875 _atom_site.Cartn_y -3.904 _atom_site.Cartn_z 18.493 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 8.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 443 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #