data_7KJJ # _model_server_result.job_id r4ct8fsv3IE8DDk0l2guVQ _model_server_result.datetime_utc '2024-11-23 01:26:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kjj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7KJJ # _exptl.entry_id 7KJJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KJJ _cell.length_a 92.43 _cell.length_b 92.43 _cell.length_c 87.78 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KJJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 87.78 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7KJJ _atom_sites.fract_transf_matrix[1][1] 0.010819 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010819 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011392 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T44 A 1 201 201 T44 T44 . D 3 EDO A 1 202 301 EDO EDO . E 2 T44 B 1 201 201 T44 T44 . F 4 HOH A 1 301 129 HOH HOH . F 4 HOH A 2 302 168 HOH HOH . F 4 HOH A 3 303 119 HOH HOH . F 4 HOH A 4 304 36 HOH HOH . F 4 HOH A 5 305 144 HOH HOH . F 4 HOH A 6 306 25 HOH HOH . F 4 HOH A 7 307 71 HOH HOH . F 4 HOH A 8 308 31 HOH HOH . F 4 HOH A 9 309 16 HOH HOH . F 4 HOH A 10 310 52 HOH HOH . F 4 HOH A 11 311 89 HOH HOH . F 4 HOH A 12 312 107 HOH HOH . F 4 HOH A 13 313 87 HOH HOH . F 4 HOH A 14 314 157 HOH HOH . F 4 HOH A 15 315 20 HOH HOH . F 4 HOH A 16 316 59 HOH HOH . F 4 HOH A 17 317 103 HOH HOH . F 4 HOH A 18 318 118 HOH HOH . F 4 HOH A 19 319 40 HOH HOH . F 4 HOH A 20 320 5 HOH HOH . F 4 HOH A 21 321 69 HOH HOH . F 4 HOH A 22 322 58 HOH HOH . F 4 HOH A 23 323 28 HOH HOH . F 4 HOH A 24 324 4 HOH HOH . F 4 HOH A 25 325 13 HOH HOH . F 4 HOH A 26 326 82 HOH HOH . F 4 HOH A 27 327 41 HOH HOH . F 4 HOH A 28 328 14 HOH HOH . F 4 HOH A 29 329 166 HOH HOH . F 4 HOH A 30 330 17 HOH HOH . F 4 HOH A 31 331 11 HOH HOH . F 4 HOH A 32 332 10 HOH HOH . F 4 HOH A 33 333 79 HOH HOH . F 4 HOH A 34 334 26 HOH HOH . F 4 HOH A 35 335 23 HOH HOH . F 4 HOH A 36 336 128 HOH HOH . F 4 HOH A 37 337 45 HOH HOH . F 4 HOH A 38 338 159 HOH HOH . F 4 HOH A 39 339 54 HOH HOH . F 4 HOH A 40 340 32 HOH HOH . F 4 HOH A 41 341 85 HOH HOH . F 4 HOH A 42 342 92 HOH HOH . F 4 HOH A 43 343 135 HOH HOH . F 4 HOH A 44 344 156 HOH HOH . F 4 HOH A 45 345 131 HOH HOH . F 4 HOH A 46 346 112 HOH HOH . F 4 HOH A 47 347 104 HOH HOH . F 4 HOH A 48 348 43 HOH HOH . F 4 HOH A 49 349 7 HOH HOH . F 4 HOH A 50 350 22 HOH HOH . F 4 HOH A 51 351 62 HOH HOH . F 4 HOH A 52 352 150 HOH HOH . F 4 HOH A 53 353 151 HOH HOH . F 4 HOH A 54 354 72 HOH HOH . F 4 HOH A 55 355 160 HOH HOH . F 4 HOH A 56 356 65 HOH HOH . F 4 HOH A 57 357 51 HOH HOH . F 4 HOH A 58 358 15 HOH HOH . F 4 HOH A 59 359 98 HOH HOH . F 4 HOH A 60 360 162 HOH HOH . F 4 HOH A 61 361 148 HOH HOH . F 4 HOH A 62 362 91 HOH HOH . F 4 HOH A 63 363 56 HOH HOH . F 4 HOH A 64 364 146 HOH HOH . F 4 HOH A 65 365 47 HOH HOH . F 4 HOH A 66 366 106 HOH HOH . F 4 HOH A 67 367 66 HOH HOH . F 4 HOH A 68 368 178 HOH HOH . F 4 HOH A 69 369 30 HOH HOH . F 4 HOH A 70 370 154 HOH HOH . F 4 HOH A 71 371 122 HOH HOH . F 4 HOH A 72 372 75 HOH HOH . F 4 HOH A 73 373 132 HOH HOH . F 4 HOH A 74 374 114 HOH HOH . F 4 HOH A 75 375 167 HOH HOH . F 4 HOH A 76 376 57 HOH HOH . F 4 HOH A 77 377 100 HOH HOH . F 4 HOH A 78 378 161 HOH HOH . F 4 HOH A 79 379 76 HOH HOH . F 4 HOH A 80 380 163 HOH HOH . F 4 HOH A 81 381 153 HOH HOH . F 4 HOH A 82 382 169 HOH HOH . F 4 HOH A 83 383 170 HOH HOH . F 4 HOH A 84 384 101 HOH HOH . F 4 HOH A 85 385 105 HOH HOH . F 4 HOH A 86 386 80 HOH HOH . F 4 HOH A 87 387 113 HOH HOH . F 4 HOH A 88 388 67 HOH HOH . F 4 HOH A 89 389 138 HOH HOH . F 4 HOH A 90 390 137 HOH HOH . F 4 HOH A 91 391 126 HOH HOH . F 4 HOH A 92 392 121 HOH HOH . F 4 HOH A 93 393 164 HOH HOH . G 4 HOH B 1 301 44 HOH HOH . G 4 HOH B 2 302 176 HOH HOH . G 4 HOH B 3 303 81 HOH HOH . G 4 HOH B 4 304 96 HOH HOH . G 4 HOH B 5 305 24 HOH HOH . G 4 HOH B 6 306 35 HOH HOH . G 4 HOH B 7 307 53 HOH HOH . G 4 HOH B 8 308 12 HOH HOH . G 4 HOH B 9 309 42 HOH HOH . G 4 HOH B 10 310 83 HOH HOH . G 4 HOH B 11 311 29 HOH HOH . G 4 HOH B 12 312 94 HOH HOH . G 4 HOH B 13 313 95 HOH HOH . G 4 HOH B 14 314 1 HOH HOH . G 4 HOH B 15 315 18 HOH HOH . G 4 HOH B 16 316 50 HOH HOH . G 4 HOH B 17 317 88 HOH HOH . G 4 HOH B 18 318 158 HOH HOH . G 4 HOH B 19 319 3 HOH HOH . G 4 HOH B 20 320 109 HOH HOH . G 4 HOH B 21 321 21 HOH HOH . G 4 HOH B 22 322 116 HOH HOH . G 4 HOH B 23 323 19 HOH HOH . G 4 HOH B 24 324 142 HOH HOH . G 4 HOH B 25 325 61 HOH HOH . G 4 HOH B 26 326 123 HOH HOH . G 4 HOH B 27 327 73 HOH HOH . G 4 HOH B 28 328 6 HOH HOH . G 4 HOH B 29 329 8 HOH HOH . G 4 HOH B 30 330 46 HOH HOH . G 4 HOH B 31 331 48 HOH HOH . G 4 HOH B 32 332 86 HOH HOH . G 4 HOH B 33 333 38 HOH HOH . G 4 HOH B 34 334 37 HOH HOH . G 4 HOH B 35 335 102 HOH HOH . G 4 HOH B 36 336 93 HOH HOH . G 4 HOH B 37 337 63 HOH HOH . G 4 HOH B 38 338 2 HOH HOH . G 4 HOH B 39 339 136 HOH HOH . G 4 HOH B 40 340 171 HOH HOH . G 4 HOH B 41 341 55 HOH HOH . G 4 HOH B 42 342 155 HOH HOH . G 4 HOH B 43 343 90 HOH HOH . G 4 HOH B 44 344 49 HOH HOH . G 4 HOH B 45 345 9 HOH HOH . G 4 HOH B 46 346 120 HOH HOH . G 4 HOH B 47 347 78 HOH HOH . G 4 HOH B 48 348 130 HOH HOH . G 4 HOH B 49 349 117 HOH HOH . G 4 HOH B 50 350 64 HOH HOH . G 4 HOH B 51 351 84 HOH HOH . G 4 HOH B 52 352 143 HOH HOH . G 4 HOH B 53 353 149 HOH HOH . G 4 HOH B 54 354 34 HOH HOH . G 4 HOH B 55 355 74 HOH HOH . G 4 HOH B 56 356 70 HOH HOH . G 4 HOH B 57 357 152 HOH HOH . G 4 HOH B 58 358 77 HOH HOH . G 4 HOH B 59 359 134 HOH HOH . G 4 HOH B 60 360 111 HOH HOH . G 4 HOH B 61 361 39 HOH HOH . G 4 HOH B 62 362 140 HOH HOH . G 4 HOH B 63 363 145 HOH HOH . G 4 HOH B 64 364 141 HOH HOH . G 4 HOH B 65 365 33 HOH HOH . G 4 HOH B 66 366 173 HOH HOH . G 4 HOH B 67 367 68 HOH HOH . G 4 HOH B 68 368 172 HOH HOH . G 4 HOH B 69 369 97 HOH HOH . G 4 HOH B 70 370 133 HOH HOH . G 4 HOH B 71 371 177 HOH HOH . G 4 HOH B 72 372 175 HOH HOH . G 4 HOH B 73 373 147 HOH HOH . G 4 HOH B 74 374 174 HOH HOH . G 4 HOH B 75 375 124 HOH HOH . G 4 HOH B 76 376 99 HOH HOH . G 4 HOH B 77 377 27 HOH HOH . G 4 HOH B 78 378 165 HOH HOH . G 4 HOH B 79 379 60 HOH HOH . G 4 HOH B 80 380 139 HOH HOH . G 4 HOH B 81 381 110 HOH HOH . G 4 HOH B 82 382 127 HOH HOH . G 4 HOH B 83 383 108 HOH HOH . G 4 HOH B 84 384 115 HOH HOH . G 4 HOH B 85 385 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . A . D 3 49.81 82.212 36.431 0.5 40.89 ? C1 EDO 202 A 1 HETATM 2 C C1 EDO . B . D 3 49.465 82.284 36.031 0.5 40.7 ? C1 EDO 202 A 1 HETATM 3 O O1 EDO . A . D 3 50.202 82.702 37.728 0.5 43.21 ? O1 EDO 202 A 1 HETATM 4 O O1 EDO . B . D 3 49.348 83.148 37.181 0.5 42.74 ? O1 EDO 202 A 1 HETATM 5 C C2 EDO . A . D 3 51.011 82.122 35.487 0.5 33.14 ? C2 EDO 202 A 1 HETATM 6 C C2 EDO . B . D 3 50.9 82.236 35.468 0.5 33.95 ? C2 EDO 202 A 1 HETATM 7 O O2 EDO . A . D 3 51.132 80.776 34.999 0.5 34.22 ? O2 EDO 202 A 1 HETATM 8 O O2 EDO . B . D 3 51.885 82.226 36.508 0.5 35.89 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #