data_7KK6 # _model_server_result.job_id fdCX-TU1-lu9ahE04oBxbg _model_server_result.datetime_utc '2024-11-23 03:12:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kk6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":9001}' # _entry.id 7KK6 # _exptl.entry_id 7KK6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.292 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KK6 _cell.length_a 48.54 _cell.length_b 91.41 _cell.length_c 162.75 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KK6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C13 H16 N4 O' _chem_comp.formula_weight 244.292 _chem_comp.id 78P _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Veliparib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C13 78P sing 1 n n C13 C17 78P sing 2 n n C13 N14 78P sing 3 n n C13 C8 78P sing 4 n n C17 C16 78P sing 5 n n N14 C15 78P sing 6 n n N7 C8 78P doub 7 n y N7 C3 78P sing 8 n y C8 N9 78P sing 9 n y C15 C16 78P sing 10 n n N9 C4 78P sing 11 n y C3 C2 78P doub 12 n y C3 C4 78P sing 13 n y C2 C1 78P sing 14 n y C4 C5 78P doub 15 n y C1 C6 78P doub 16 n y C5 C6 78P sing 17 n y C5 C10 78P sing 18 n n N11 C10 78P sing 19 n n C10 O12 78P doub 20 n n C6 H6 78P sing 21 n n C15 H151 78P sing 22 n n C15 H152 78P sing 23 n n C17 H171 78P sing 24 n n C17 H172 78P sing 25 n n C1 H1 78P sing 26 n n C2 H2 78P sing 27 n n N9 H9 78P sing 28 n n N11 H111 78P sing 29 n n N11 H112 78P sing 30 n n N14 H141 78P sing 31 n n C16 H161 78P sing 32 n n C16 H162 78P sing 33 n n C18 H181 78P sing 34 n n C18 H182 78P sing 35 n n C18 H183 78P sing 36 n n # _atom_sites.entry_id 7KK6 _atom_sites.fract_transf_matrix[1][1] 0.020602 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01094 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006144 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 78P A 1 9001 9001 78P UNL . D 3 SO4 A 1 9002 9002 SO4 SO4 . E 3 SO4 A 1 9003 9003 SO4 SO4 . F 3 SO4 A 1 9004 9004 SO4 SO4 . G 2 78P B 1 9001 9001 78P UNL . H 3 SO4 B 1 9002 9002 SO4 SO4 . I 3 SO4 B 1 9003 9003 SO4 SO4 . J 4 HOH A 1 9101 173 HOH HOH . J 4 HOH A 2 9102 169 HOH HOH . J 4 HOH A 3 9103 171 HOH HOH . J 4 HOH A 4 9104 170 HOH HOH . J 4 HOH A 5 9105 8 HOH HOH . J 4 HOH A 6 9106 9 HOH HOH . J 4 HOH A 7 9107 20 HOH HOH . J 4 HOH A 8 9108 162 HOH HOH . J 4 HOH A 9 9109 22 HOH HOH . J 4 HOH A 10 9110 18 HOH HOH . J 4 HOH A 11 9111 152 HOH HOH . J 4 HOH A 12 9112 165 HOH HOH . J 4 HOH A 13 9113 84 HOH HOH . J 4 HOH A 14 9114 51 HOH HOH . J 4 HOH A 15 9115 142 HOH HOH . J 4 HOH A 16 9116 151 HOH HOH . J 4 HOH A 17 9117 21 HOH HOH . J 4 HOH A 18 9118 23 HOH HOH . J 4 HOH A 19 9119 114 HOH HOH . J 4 HOH A 20 9120 36 HOH HOH . J 4 HOH A 21 9121 49 HOH HOH . J 4 HOH A 22 9122 150 HOH HOH . J 4 HOH A 23 9123 61 HOH HOH . J 4 HOH A 24 9124 137 HOH HOH . J 4 HOH A 25 9125 172 HOH HOH . J 4 HOH A 26 9126 53 HOH HOH . J 4 HOH A 27 9127 57 HOH HOH . J 4 HOH A 28 9128 127 HOH HOH . J 4 HOH A 29 9129 80 HOH HOH . J 4 HOH A 30 9130 52 HOH HOH . J 4 HOH A 31 9131 66 HOH HOH . J 4 HOH A 32 9132 41 HOH HOH . J 4 HOH A 33 9133 115 HOH HOH . J 4 HOH A 34 9134 40 HOH HOH . J 4 HOH A 35 9135 25 HOH HOH . J 4 HOH A 36 9136 26 HOH HOH . J 4 HOH A 37 9137 126 HOH HOH . J 4 HOH A 38 9138 46 HOH HOH . J 4 HOH A 39 9139 116 HOH HOH . J 4 HOH A 40 9140 89 HOH HOH . J 4 HOH A 41 9141 83 HOH HOH . J 4 HOH A 42 9142 68 HOH HOH . J 4 HOH A 43 9143 15 HOH HOH . J 4 HOH A 44 9144 144 HOH HOH . J 4 HOH A 45 9145 14 HOH HOH . J 4 HOH A 46 9146 148 HOH HOH . J 4 HOH A 47 9147 123 HOH HOH . J 4 HOH A 48 9148 112 HOH HOH . J 4 HOH A 49 9149 108 HOH HOH . J 4 HOH A 50 9150 105 HOH HOH . J 4 HOH A 51 9151 122 HOH HOH . J 4 HOH A 52 9152 24 HOH HOH . J 4 HOH A 53 9153 30 HOH HOH . J 4 HOH A 54 9154 55 HOH HOH . J 4 HOH A 55 9155 93 HOH HOH . J 4 HOH A 56 9156 79 HOH HOH . J 4 HOH A 57 9157 107 HOH HOH . J 4 HOH A 58 9158 45 HOH HOH . J 4 HOH A 59 9159 106 HOH HOH . J 4 HOH A 60 9160 166 HOH HOH . J 4 HOH A 61 9161 78 HOH HOH . J 4 HOH A 62 9162 7 HOH HOH . J 4 HOH A 63 9163 88 HOH HOH . J 4 HOH A 64 9164 63 HOH HOH . J 4 HOH A 65 9165 42 HOH HOH . J 4 HOH A 66 9166 167 HOH HOH . J 4 HOH A 67 9167 64 HOH HOH . J 4 HOH A 68 9168 62 HOH HOH . J 4 HOH A 69 9169 96 HOH HOH . J 4 HOH A 70 9170 2 HOH HOH . J 4 HOH A 71 9171 74 HOH HOH . J 4 HOH A 72 9172 44 HOH HOH . J 4 HOH A 73 9173 118 HOH HOH . J 4 HOH A 74 9174 12 HOH HOH . J 4 HOH A 75 9175 99 HOH HOH . J 4 HOH A 76 9176 100 HOH HOH . J 4 HOH A 77 9177 130 HOH HOH . J 4 HOH A 78 9178 65 HOH HOH . J 4 HOH A 79 9179 125 HOH HOH . J 4 HOH A 80 9180 138 HOH HOH . J 4 HOH A 81 9181 111 HOH HOH . J 4 HOH A 82 9182 120 HOH HOH . J 4 HOH A 83 9183 3 HOH HOH . J 4 HOH A 84 9184 13 HOH HOH . J 4 HOH A 85 9185 58 HOH HOH . J 4 HOH A 86 9186 48 HOH HOH . J 4 HOH A 87 9187 37 HOH HOH . J 4 HOH A 88 9188 103 HOH HOH . J 4 HOH A 89 9189 94 HOH HOH . J 4 HOH A 90 9190 5 HOH HOH . J 4 HOH A 91 9191 124 HOH HOH . J 4 HOH A 92 9192 77 HOH HOH . J 4 HOH A 93 9193 136 HOH HOH . J 4 HOH A 94 9194 90 HOH HOH . J 4 HOH A 95 9195 33 HOH HOH . J 4 HOH A 96 9196 131 HOH HOH . J 4 HOH A 97 9197 161 HOH HOH . J 4 HOH A 98 9198 156 HOH HOH . K 4 HOH B 1 9101 141 HOH HOH . K 4 HOH B 2 9102 158 HOH HOH . K 4 HOH B 3 9103 43 HOH HOH . K 4 HOH B 4 9104 98 HOH HOH . K 4 HOH B 5 9105 147 HOH HOH . K 4 HOH B 6 9106 143 HOH HOH . K 4 HOH B 7 9107 19 HOH HOH . K 4 HOH B 8 9108 11 HOH HOH . K 4 HOH B 9 9109 140 HOH HOH . K 4 HOH B 10 9110 117 HOH HOH . K 4 HOH B 11 9111 92 HOH HOH . K 4 HOH B 12 9112 95 HOH HOH . K 4 HOH B 13 9113 102 HOH HOH . K 4 HOH B 14 9114 119 HOH HOH . K 4 HOH B 15 9115 16 HOH HOH . K 4 HOH B 16 9116 157 HOH HOH . K 4 HOH B 17 9117 6 HOH HOH . K 4 HOH B 18 9118 34 HOH HOH . K 4 HOH B 19 9119 101 HOH HOH . K 4 HOH B 20 9120 91 HOH HOH . K 4 HOH B 21 9121 85 HOH HOH . K 4 HOH B 22 9122 69 HOH HOH . K 4 HOH B 23 9123 29 HOH HOH . K 4 HOH B 24 9124 163 HOH HOH . K 4 HOH B 25 9125 4 HOH HOH . K 4 HOH B 26 9126 39 HOH HOH . K 4 HOH B 27 9127 164 HOH HOH . K 4 HOH B 28 9128 17 HOH HOH . K 4 HOH B 29 9129 110 HOH HOH . K 4 HOH B 30 9130 71 HOH HOH . K 4 HOH B 31 9131 67 HOH HOH . K 4 HOH B 32 9132 146 HOH HOH . K 4 HOH B 33 9133 154 HOH HOH . K 4 HOH B 34 9134 132 HOH HOH . K 4 HOH B 35 9135 128 HOH HOH . K 4 HOH B 36 9136 168 HOH HOH . K 4 HOH B 37 9137 87 HOH HOH . K 4 HOH B 38 9138 47 HOH HOH . K 4 HOH B 39 9139 31 HOH HOH . K 4 HOH B 40 9140 73 HOH HOH . K 4 HOH B 41 9141 35 HOH HOH . K 4 HOH B 42 9142 113 HOH HOH . K 4 HOH B 43 9143 72 HOH HOH . K 4 HOH B 44 9144 159 HOH HOH . K 4 HOH B 45 9145 70 HOH HOH . K 4 HOH B 46 9146 153 HOH HOH . K 4 HOH B 47 9147 32 HOH HOH . K 4 HOH B 48 9148 134 HOH HOH . K 4 HOH B 49 9149 133 HOH HOH . K 4 HOH B 50 9150 50 HOH HOH . K 4 HOH B 51 9151 135 HOH HOH . K 4 HOH B 52 9152 28 HOH HOH . K 4 HOH B 53 9153 82 HOH HOH . K 4 HOH B 54 9154 56 HOH HOH . K 4 HOH B 55 9155 10 HOH HOH . K 4 HOH B 56 9156 145 HOH HOH . K 4 HOH B 57 9157 60 HOH HOH . K 4 HOH B 58 9158 59 HOH HOH . K 4 HOH B 59 9159 104 HOH HOH . K 4 HOH B 60 9160 54 HOH HOH . K 4 HOH B 61 9161 81 HOH HOH . K 4 HOH B 62 9162 139 HOH HOH . K 4 HOH B 63 9163 38 HOH HOH . K 4 HOH B 64 9164 97 HOH HOH . K 4 HOH B 65 9165 129 HOH HOH . K 4 HOH B 66 9166 86 HOH HOH . K 4 HOH B 67 9167 75 HOH HOH . K 4 HOH B 68 9168 27 HOH HOH . K 4 HOH B 69 9169 121 HOH HOH . K 4 HOH B 70 9170 149 HOH HOH . K 4 HOH B 71 9171 155 HOH HOH . K 4 HOH B 72 9172 76 HOH HOH . K 4 HOH B 73 9173 109 HOH HOH . K 4 HOH B 74 9174 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 78P . . . G 2 0.908 -17.299 35.619 1 33.38 ? C4 78P 9001 B 1 HETATM 2 C C5 78P . . . G 2 0.662 -17.346 37.004 1 33.83 ? C5 78P 9001 B 1 HETATM 3 C C6 78P . . . G 2 -0.512 -16.789 37.521 1 32.5 ? C6 78P 9001 B 1 HETATM 4 C C8 78P . . . G 2 1.576 -17.463 33.563 1 28.21 ? C8 78P 9001 B 1 HETATM 5 C C10 78P . . . G 2 1.653 -17.941 37.958 1 33.66 ? C10 78P 9001 B 1 HETATM 6 C C13 78P . . . G 2 2.47 -17.8 32.349 1 27.08 ? C13 78P 9001 B 1 HETATM 7 C C15 78P . . . G 2 4.9 -17.71 32.332 1 30.07 ? C15 78P 9001 B 1 HETATM 8 C C17 78P . . . G 2 2.94 -16.528 31.628 1 27.26 ? C17 78P 9001 B 1 HETATM 9 C C1 78P . . . G 2 -1.424 -16.167 36.68 1 32.81 ? C1 78P 9001 B 1 HETATM 10 C C2 78P . . . G 2 -1.235 -16.166 35.307 1 31.54 ? C2 78P 9001 B 1 HETATM 11 C C3 78P . . . G 2 -0.069 -16.734 34.795 1 31.31 ? C3 78P 9001 B 1 HETATM 12 N N7 78P . . . G 2 0.376 -16.842 33.491 1 30.65 ? N7 78P 9001 B 1 HETATM 13 N N9 78P . . . G 2 1.925 -17.774 34.797 1 29.21 ? N9 78P 9001 B 1 HETATM 14 N N11 78P . . . G 2 2.787 -18.422 37.461 1 30.63 ? N11 78P 9001 B 1 HETATM 15 O O12 78P . . . G 2 1.392 -17.978 39.171 1 36.51 ? O12 78P 9001 B 1 HETATM 16 N N14 78P . . . G 2 3.724 -18.487 32.856 1 29.06 ? N14 78P 9001 B 1 HETATM 17 C C16 78P . . . G 2 4.375 -16.324 32.109 1 27.68 ? C16 78P 9001 B 1 HETATM 18 C C18 78P . . . G 2 1.745 -18.737 31.383 1 24.7 ? C18 78P 9001 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #