data_7KK8 # _model_server_result.job_id 2d2SnkRz8jzBpteMb1JJcg _model_server_result.datetime_utc '2024-10-15 11:28:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kk8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":501}' # _entry.id 7KK8 # _exptl.entry_id 7KK8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KK8 _cell.length_a 87.06 _cell.length_b 87.06 _cell.length_c 143.15 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KK8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 J N N ? 5 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 75 A GLY 75 1_555 F NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc2 A O SER 78 A SER 78 1_555 F NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc3 F NA NA . A NA 202 1_555 B O GLY 75 B GLY 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc4 F NA NA . A NA 202 1_555 B O SER 78 B SER 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 83 n n C40 C43 DMU sing 84 n n C37 C34 DMU sing 85 n n C34 C31 DMU sing 86 n n C31 C28 DMU sing 87 n n C28 C25 DMU sing 88 n n C22 C25 DMU sing 89 n n C22 C19 DMU sing 90 n n O61 C57 DMU sing 91 n n O4 C7 DMU sing 92 n n C18 C19 DMU sing 93 n n C18 O16 DMU sing 94 n n O5 C6 DMU sing 95 n n O5 C4 DMU sing 96 n n C57 C4 DMU sing 97 n n C6 O16 DMU sing 98 n n C6 C1 DMU sing 99 n n C7 C5 DMU sing 100 n n C7 C8 DMU sing 101 n n C4 C3 DMU sing 102 n n O1 C10 DMU sing 103 n n O1 C9 DMU sing 104 n n C10 C5 DMU sing 105 n n C10 O7 DMU sing 106 n n C5 O3 DMU sing 107 n n O49 C1 DMU sing 108 n n C8 C9 DMU sing 109 n n C8 O2 DMU sing 110 n n C1 C2 DMU sing 111 n n C11 C9 DMU sing 112 n n C11 O6 DMU sing 113 n n C3 O7 DMU sing 114 n n C3 C2 DMU sing 115 n n C2 O55 DMU sing 116 n n C1 H1 DMU sing 117 n n C2 H2 DMU sing 118 n n C3 H3 DMU sing 119 n n C4 H4 DMU sing 120 n n C6 H5 DMU sing 121 n n C18 H6 DMU sing 122 n n C18 H7 DMU sing 123 n n C19 H8 DMU sing 124 n n C19 H9 DMU sing 125 n n C22 H10 DMU sing 126 n n C22 H11 DMU sing 127 n n C25 H12 DMU sing 128 n n C25 H13 DMU sing 129 n n C28 H14 DMU sing 130 n n C28 H15 DMU sing 131 n n C31 H16 DMU sing 132 n n C31 H17 DMU sing 133 n n C34 H18 DMU sing 134 n n C34 H19 DMU sing 135 n n C37 H20 DMU sing 136 n n C37 H21 DMU sing 137 n n C40 H22 DMU sing 138 n n C40 H23 DMU sing 139 n n C43 H24 DMU sing 140 n n C43 H25 DMU sing 141 n n C43 H26 DMU sing 142 n n O49 H27 DMU sing 143 n n O55 H28 DMU sing 144 n n C57 H29 DMU sing 145 n n C57 H30 DMU sing 146 n n O61 H31 DMU sing 147 n n C5 H32 DMU sing 148 n n C7 H33 DMU sing 149 n n C8 H34 DMU sing 150 n n C9 H35 DMU sing 151 n n C10 H36 DMU sing 152 n n O2 H37 DMU sing 153 n n O3 H38 DMU sing 154 n n O4 H39 DMU sing 155 n n C11 H40 DMU sing 156 n n C11 H41 DMU sing 157 n n O6 H42 DMU sing 158 n n # _atom_sites.entry_id 7KK8 _atom_sites.fract_transf_matrix[1][1] 0.011486 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011486 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006986 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 BR A 1 201 1 BR BR . F 4 NA A 1 202 1 NA NA . G 5 DMU A 1 203 201 DMU DMU . H 3 BR B 1 201 2 BR BR . I 6 F B 1 202 1 F F . J 5 DMU B 1 203 401 DMU DMU . K 5 DMU C 1 501 501 DMU DMU . L 7 SO4 C 1 502 1 SO4 SO4 . M 8 HOH B 1 301 28 HOH HOH . M 8 HOH B 2 302 2 HOH HOH . M 8 HOH B 3 303 37 HOH HOH . M 8 HOH B 4 304 10 HOH HOH . N 8 HOH C 1 601 17 HOH HOH . N 8 HOH C 2 602 24 HOH HOH . N 8 HOH C 3 603 6 HOH HOH . N 8 HOH C 4 604 5 HOH HOH . N 8 HOH C 5 605 8 HOH HOH . N 8 HOH C 6 606 4 HOH HOH . N 8 HOH C 7 607 26 HOH HOH . N 8 HOH C 8 608 23 HOH HOH . N 8 HOH C 9 609 1 HOH HOH . N 8 HOH C 10 610 12 HOH HOH . N 8 HOH C 11 611 30 HOH HOH . N 8 HOH C 12 612 35 HOH HOH . N 8 HOH C 13 613 21 HOH HOH . N 8 HOH C 14 614 7 HOH HOH . N 8 HOH C 15 615 34 HOH HOH . N 8 HOH C 16 616 20 HOH HOH . N 8 HOH C 17 617 33 HOH HOH . N 8 HOH C 18 618 32 HOH HOH . O 8 HOH D 1 101 15 HOH HOH . O 8 HOH D 2 102 18 HOH HOH . O 8 HOH D 3 103 14 HOH HOH . O 8 HOH D 4 104 19 HOH HOH . O 8 HOH D 5 105 11 HOH HOH . O 8 HOH D 6 106 9 HOH HOH . O 8 HOH D 7 107 3 HOH HOH . O 8 HOH D 8 108 22 HOH HOH . O 8 HOH D 9 109 36 HOH HOH . O 8 HOH D 10 110 13 HOH HOH . O 8 HOH D 11 111 16 HOH HOH . O 8 HOH D 12 112 25 HOH HOH . O 8 HOH D 13 113 29 HOH HOH . O 8 HOH D 14 114 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . K 5 76.36 66.953 9.355 1 97.24 ? C1 DMU 501 C 1 HETATM 2 C C2 DMU . . . K 5 77.765 67.51 9.47 1 92.85 ? C2 DMU 501 C 1 HETATM 3 C C3 DMU . . . K 5 78.242 67.498 10.919 1 93.07 ? C3 DMU 501 C 1 HETATM 4 C C4 DMU . . . K 5 78.04 66.129 11.551 1 94.77 ? C4 DMU 501 C 1 HETATM 5 O O5 DMU . . . K 5 76.663 65.749 11.427 1 100.73 ? O5 DMU 501 C 1 HETATM 6 C C6 DMU . . . K 5 76.28 65.605 10.059 1 98.49 ? C6 DMU 501 C 1 HETATM 7 O O7 DMU . . . K 5 79.658 67.676 10.801 1 95.73 ? O7 DMU 501 C 1 HETATM 8 O O16 DMU . . . K 5 74.94 65.108 9.998 1 109.52 ? O16 DMU 501 C 1 HETATM 9 C C18 DMU . . . K 5 74.667 64.355 8.806 1 113.48 ? C18 DMU 501 C 1 HETATM 10 C C19 DMU . . . K 5 75.666 63.229 8.711 1 100.35 ? C19 DMU 501 C 1 HETATM 11 C C22 DMU . . . K 5 75.686 62.564 7.344 1 95.31 ? C22 DMU 501 C 1 HETATM 12 C C25 DMU . . . K 5 76.356 61.203 7.323 1 85.83 ? C25 DMU 501 C 1 HETATM 13 C C28 DMU . . . K 5 75.759 60.205 8.298 1 81.53 ? C28 DMU 501 C 1 HETATM 14 C C31 DMU . . . K 5 75.987 58.757 7.912 1 83.88 ? C31 DMU 501 C 1 HETATM 15 C C34 DMU . . . K 5 75.512 58.421 6.511 1 90.67 ? C34 DMU 501 C 1 HETATM 16 C C37 DMU . . . K 5 75.737 56.979 6.088 1 91 ? C37 DMU 501 C 1 HETATM 17 C C40 DMU . . . K 5 74.815 55.969 6.75 1 91.61 ? C40 DMU 501 C 1 HETATM 18 C C43 DMU . . . K 5 74.918 54.583 6.133 1 93.17 ? C43 DMU 501 C 1 HETATM 19 O O49 DMU . . . K 5 76.03 66.83 7.967 1 98.37 ? O49 DMU 501 C 1 HETATM 20 O O55 DMU . . . K 5 77.837 68.832 8.918 1 91.09 ? O55 DMU 501 C 1 HETATM 21 C C57 DMU . . . K 5 78.389 66.102 13.017 1 97.35 ? C57 DMU 501 C 1 HETATM 22 O O61 DMU . . . K 5 78.116 64.817 13.585 1 102.41 ? O61 DMU 501 C 1 HETATM 23 C C5 DMU . . . K 5 81.324 69.238 10.259 1 87.09 ? C5 DMU 501 C 1 HETATM 24 C C7 DMU . . . K 5 82.292 68.067 10.206 1 82.92 ? C7 DMU 501 C 1 HETATM 25 C C8 DMU . . . K 5 82.833 67.774 11.599 1 78.75 ? C8 DMU 501 C 1 HETATM 26 C C9 DMU . . . K 5 81.676 67.535 12.568 1 84.48 ? C9 DMU 501 C 1 HETATM 27 O O1 DMU . . . K 5 80.78 68.661 12.542 1 98.48 ? O1 DMU 501 C 1 HETATM 28 C C10 DMU . . . K 5 80.214 68.909 11.251 1 94.3 ? C10 DMU 501 C 1 HETATM 29 O O2 DMU . . . K 5 83.663 66.61 11.575 1 77.07 ? O2 DMU 501 C 1 HETATM 30 O O3 DMU . . . K 5 80.752 69.51 8.974 1 86.95 ? O3 DMU 501 C 1 HETATM 31 O O4 DMU . . . K 5 83.368 68.306 9.292 1 77.34 ? O4 DMU 501 C 1 HETATM 32 C C11 DMU . . . K 5 82.126 67.342 13.995 1 81.72 ? C11 DMU 501 C 1 HETATM 33 O O6 DMU . . . K 5 81.02 67.001 14.837 1 97.89 ? O6 DMU 501 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 33 #