data_7KKB
#
_model_server_result.job_id            NWmURcgTin8IRHPpuoX1gA 
_model_server_result.datetime_utc      '2025-01-25 11:01:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kkb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":501}' 
#
_entry.id    7KKB 
#
_exptl.entry_id    7KKB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              482.562 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DECYL-BETA-D-MALTOPYRANOSIDE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7KKB 
_cell.length_a            87.17 
_cell.length_b            87.17 
_cell.length_c            142.73 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7KKB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 H N N 
? 6 K N N 
? 6 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLY 75 A GLY 75 1_555 F NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc2 A O SER 78 A SER 78 1_555 F NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc3 F NA NA . A NA 202 1_555 B O GLY 75 B GLY 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc4 F NA NA . A NA 202 1_555 B O SER 78 B SER 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
#
_chem_comp.formula           'C22 H42 O11' 
_chem_comp.formula_weight    482.562 
_chem_comp.id                DMU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DECYL-BETA-D-MALTOPYRANOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     DECYLMALTOSIDE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C40 C37 DMU sing 83 n n 
C40 C43 DMU sing 84 n n 
C37 C34 DMU sing 85 n n 
C34 C31 DMU sing 86 n n 
C31 C28 DMU sing 87 n n 
C28 C25 DMU sing 88 n n 
C22 C25 DMU sing 89 n n 
C22 C19 DMU sing 90 n n 
O61 C57 DMU sing 91 n n 
O4 C7 DMU sing 92 n n 
C18 C19 DMU sing 93 n n 
C18 O16 DMU sing 94 n n 
O5 C6 DMU sing 95 n n 
O5 C4 DMU sing 96 n n 
C57 C4 DMU sing 97 n n 
C6 O16 DMU sing 98 n n 
C6 C1 DMU sing 99 n n 
C7 C5 DMU sing 100 n n 
C7 C8 DMU sing 101 n n 
C4 C3 DMU sing 102 n n 
O1 C10 DMU sing 103 n n 
O1 C9 DMU sing 104 n n 
C10 C5 DMU sing 105 n n 
C10 O7 DMU sing 106 n n 
C5 O3 DMU sing 107 n n 
O49 C1 DMU sing 108 n n 
C8 C9 DMU sing 109 n n 
C8 O2 DMU sing 110 n n 
C1 C2 DMU sing 111 n n 
C11 C9 DMU sing 112 n n 
C11 O6 DMU sing 113 n n 
C3 O7 DMU sing 114 n n 
C3 C2 DMU sing 115 n n 
C2 O55 DMU sing 116 n n 
C1 H1 DMU sing 117 n n 
C2 H2 DMU sing 118 n n 
C3 H3 DMU sing 119 n n 
C4 H4 DMU sing 120 n n 
C6 H5 DMU sing 121 n n 
C18 H6 DMU sing 122 n n 
C18 H7 DMU sing 123 n n 
C19 H8 DMU sing 124 n n 
C19 H9 DMU sing 125 n n 
C22 H10 DMU sing 126 n n 
C22 H11 DMU sing 127 n n 
C25 H12 DMU sing 128 n n 
C25 H13 DMU sing 129 n n 
C28 H14 DMU sing 130 n n 
C28 H15 DMU sing 131 n n 
C31 H16 DMU sing 132 n n 
C31 H17 DMU sing 133 n n 
C34 H18 DMU sing 134 n n 
C34 H19 DMU sing 135 n n 
C37 H20 DMU sing 136 n n 
C37 H21 DMU sing 137 n n 
C40 H22 DMU sing 138 n n 
C40 H23 DMU sing 139 n n 
C43 H24 DMU sing 140 n n 
C43 H25 DMU sing 141 n n 
C43 H26 DMU sing 142 n n 
O49 H27 DMU sing 143 n n 
O55 H28 DMU sing 144 n n 
C57 H29 DMU sing 145 n n 
C57 H30 DMU sing 146 n n 
O61 H31 DMU sing 147 n n 
C5 H32 DMU sing 148 n n 
C7 H33 DMU sing 149 n n 
C8 H34 DMU sing 150 n n 
C9 H35 DMU sing 151 n n 
C10 H36 DMU sing 152 n n 
O2 H37 DMU sing 153 n n 
O3 H38 DMU sing 154 n n 
O4 H39 DMU sing 155 n n 
C11 H40 DMU sing 156 n n 
C11 H41 DMU sing 157 n n 
O6 H42 DMU sing 158 n n 
#
_atom_sites.entry_id                     7KKB 
_atom_sites.fract_transf_matrix[1][1]    0.011472 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011472 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007006 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 BR A 1 201 1 BR BR . 
F 4 NA A 1 202 1 NA NA . 
G 5 F A 1 203 1 F F . 
H 6 DMU A 1 204 201 DMU DMU . 
I 3 BR B 1 201 2 BR BR . 
J 5 F B 1 202 2 F F . 
K 6 DMU B 1 203 401 DMU DMU . 
L 6 DMU C 1 501 501 DMU DMU . 
M 7 HOH A 1 301 2 HOH HOH . 
N 7 HOH B 1 301 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DMU . . . L 6 -23.985 -53.65 -23.236 1 112.45 ? C1 DMU 501 C 1 
HETATM 2 C C2 DMU . . . L 6 -24.498 -52.237 -23.033 1 116.37 ? C2 DMU 501 C 1 
HETATM 3 C C3 DMU . . . L 6 -24.344 -51.808 -21.575 1 110.96 ? C3 DMU 501 C 1 
HETATM 4 C C4 DMU . . . L 6 -22.915 -52.045 -21.095 1 105.59 ? C4 DMU 501 C 1 
HETATM 5 O O5 DMU . . . L 6 -22.541 -53.413 -21.326 1 107.59 ? O5 DMU 501 C 1 
HETATM 6 C C6 DMU . . . L 6 -22.558 -53.748 -22.715 1 110.28 ? C6 DMU 501 C 1 
HETATM 7 O O7 DMU . . . L 6 -24.564 -50.389 -21.55 1 112.24 ? O7 DMU 501 C 1 
HETATM 8 O O16 DMU . . . L 6 -22.065 -55.079 -22.902 1 115.31 ? O16 DMU 501 C 1 
HETATM 9 C C18 DMU . . . L 6 -21.37 -55.262 -24.145 1 115.23 ? C18 DMU 501 C 1 
HETATM 10 C C19 DMU . . . L 6 -20.132 -54.404 -24.125 1 106 ? C19 DMU 501 C 1 
HETATM 11 C C22 DMU . . . L 6 -19.431 -54.347 -25.471 1 96.9 ? C22 DMU 501 C 1 
HETATM 12 C C25 DMU . . . L 6 -18.015 -53.805 -25.415 1 82.93 ? C25 DMU 501 C 1 
HETATM 13 C C28 DMU . . . L 6 -17.073 -54.626 -24.554 1 70.85 ? C28 DMU 501 C 1 
HETATM 14 C C31 DMU . . . L 6 -15.616 -54.514 -24.957 1 74.09 ? C31 DMU 501 C 1 
HETATM 15 C C34 DMU . . . L 6 -15.343 -54.954 -26.384 1 83.96 ? C34 DMU 501 C 1 
HETATM 16 C C37 DMU . . . L 6 -13.89 -54.847 -26.806 1 96.75 ? C37 DMU 501 C 1 
HETATM 17 C C40 DMU . . . L 6 -12.951 -55.767 -26.046 1 105.86 ? C40 DMU 501 C 1 
HETATM 18 C C43 DMU . . . L 6 -11.518 -55.699 -26.537 1 107.97 ? C43 DMU 501 C 1 
HETATM 19 O O49 DMU . . . L 6 -24.053 -53.985 -24.626 1 110.14 ? O49 DMU 501 C 1 
HETATM 20 O O55 DMU . . . L 6 -25.86 -52.131 -23.459 1 122.74 ? O55 DMU 501 C 1 
HETATM 21 C C57 DMU . . . L 6 -22.738 -51.774 -19.621 1 105.42 ? C57 DMU 501 C 1 
HETATM 22 O O61 DMU . . . L 6 -21.389 -52.006 -19.206 1 113.35 ? O61 DMU 501 C 1 
HETATM 23 C C5 DMU . . . L 6 -26.237 -48.829 -22.195 1 112.08 ? C5 DMU 501 C 1 
HETATM 24 C C7 DMU . . . L 6 -25.191 -47.731 -22.168 1 101.57 ? C7 DMU 501 C 1 
HETATM 25 C C8 DMU . . . L 6 -25.043 -47.186 -20.757 1 93.29 ? C8 DMU 501 C 1 
HETATM 26 C C9 DMU . . . L 6 -24.725 -48.333 -19.797 1 92.52 ? C9 DMU 501 C 1 
HETATM 27 O O1 DMU . . . L 6 -25.75 -49.338 -19.89 1 111.32 ? O1 DMU 501 C 1 
HETATM 28 C C10 DMU . . . L 6 -25.861 -49.916 -21.194 1 113.45 ? C10 DMU 501 C 1 
HETATM 29 O O2 DMU . . . L 6 -23.987 -46.222 -20.709 1 87.62 ? O2 DMU 501 C 1 
HETATM 30 O O3 DMU . . . L 6 -26.358 -49.387 -23.507 1 117.73 ? O3 DMU 501 C 1 
HETATM 31 O O4 DMU . . . L 6 -25.534 -46.682 -23.079 1 89.64 ? O4 DMU 501 C 1 
HETATM 32 C C11 DMU . . . L 6 -24.648 -47.894 -18.357 1 82.64 ? C11 DMU 501 C 1 
HETATM 33 O O6 DMU . . . L 6 -24.305 -48.984 -17.496 1 99.74 ? O6 DMU 501 C 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           44 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           33 
#