data_7KKR # _model_server_result.job_id QUPc0G887mDmOBKmelhzqQ _model_server_result.datetime_utc '2024-10-15 11:26:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kkr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 7KKR # _exptl.entry_id 7KKR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KKR _cell.length_a 87.62 _cell.length_b 87.62 _cell.length_c 143.99 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KKR _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 75 A GLY 75 1_555 G NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc2 A O SER 78 A SER 78 1_555 G NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc3 G NA NA . A NA 203 1_555 B O GLY 75 B GLY 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc4 G NA NA . A NA 203 1_555 B O SER 78 B SER 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 83 n n C40 C43 DMU sing 84 n n C37 C34 DMU sing 85 n n C34 C31 DMU sing 86 n n C31 C28 DMU sing 87 n n C28 C25 DMU sing 88 n n C22 C25 DMU sing 89 n n C22 C19 DMU sing 90 n n O61 C57 DMU sing 91 n n O4 C7 DMU sing 92 n n C18 C19 DMU sing 93 n n C18 O16 DMU sing 94 n n O5 C6 DMU sing 95 n n O5 C4 DMU sing 96 n n C57 C4 DMU sing 97 n n C6 O16 DMU sing 98 n n C6 C1 DMU sing 99 n n C7 C5 DMU sing 100 n n C7 C8 DMU sing 101 n n C4 C3 DMU sing 102 n n O1 C10 DMU sing 103 n n O1 C9 DMU sing 104 n n C10 C5 DMU sing 105 n n C10 O7 DMU sing 106 n n C5 O3 DMU sing 107 n n O49 C1 DMU sing 108 n n C8 C9 DMU sing 109 n n C8 O2 DMU sing 110 n n C1 C2 DMU sing 111 n n C11 C9 DMU sing 112 n n C11 O6 DMU sing 113 n n C3 O7 DMU sing 114 n n C3 C2 DMU sing 115 n n C2 O55 DMU sing 116 n n C1 H1 DMU sing 117 n n C2 H2 DMU sing 118 n n C3 H3 DMU sing 119 n n C4 H4 DMU sing 120 n n C6 H5 DMU sing 121 n n C18 H6 DMU sing 122 n n C18 H7 DMU sing 123 n n C19 H8 DMU sing 124 n n C19 H9 DMU sing 125 n n C22 H10 DMU sing 126 n n C22 H11 DMU sing 127 n n C25 H12 DMU sing 128 n n C25 H13 DMU sing 129 n n C28 H14 DMU sing 130 n n C28 H15 DMU sing 131 n n C31 H16 DMU sing 132 n n C31 H17 DMU sing 133 n n C34 H18 DMU sing 134 n n C34 H19 DMU sing 135 n n C37 H20 DMU sing 136 n n C37 H21 DMU sing 137 n n C40 H22 DMU sing 138 n n C40 H23 DMU sing 139 n n C43 H24 DMU sing 140 n n C43 H25 DMU sing 141 n n C43 H26 DMU sing 142 n n O49 H27 DMU sing 143 n n O55 H28 DMU sing 144 n n C57 H29 DMU sing 145 n n C57 H30 DMU sing 146 n n O61 H31 DMU sing 147 n n C5 H32 DMU sing 148 n n C7 H33 DMU sing 149 n n C8 H34 DMU sing 150 n n C9 H35 DMU sing 151 n n C10 H36 DMU sing 152 n n O2 H37 DMU sing 153 n n O3 H38 DMU sing 154 n n O4 H39 DMU sing 155 n n C11 H40 DMU sing 156 n n C11 H41 DMU sing 157 n n O6 H42 DMU sing 158 n n # _atom_sites.entry_id 7KKR _atom_sites.fract_transf_matrix[1][1] 0.011413 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006945 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 DMU A 1 201 201 DMU DMU . F 4 BR A 1 202 2 BR BR . G 5 NA A 1 203 1 NA NA . H 3 DMU B 1 401 401 DMU DMU . I 4 BR B 1 402 1 BR BR . J 3 DMU C 1 501 501 DMU DMU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . E 3 -1.753 -24.596 -36.677 1 59.87 ? C1 DMU 201 A 1 HETATM 2 C C2 DMU . . . E 3 -1.08 -23.742 -37.731 1 55.55 ? C2 DMU 201 A 1 HETATM 3 C C3 DMU . . . E 3 0.311 -24.296 -38.025 1 59.52 ? C3 DMU 201 A 1 HETATM 4 C C4 DMU . . . E 3 0.174 -25.766 -38.43 1 54.05 ? C4 DMU 201 A 1 HETATM 5 O O5 DMU . . . E 3 -0.49 -26.516 -37.386 1 49.15 ? O5 DMU 201 A 1 HETATM 6 C C6 DMU . . . E 3 -1.822 -26.052 -37.106 1 58.68 ? C6 DMU 201 A 1 HETATM 7 O O7 DMU . . . E 3 0.858 -23.479 -39.077 1 65.68 ? O7 DMU 201 A 1 HETATM 8 O O16 DMU . . . E 3 -2.449 -26.756 -36.02 1 63.82 ? O16 DMU 201 A 1 HETATM 9 C C18 DMU . . . E 3 -2.814 -28.134 -36.26 1 54.77 ? C18 DMU 201 A 1 HETATM 10 C C19 DMU . . . E 3 -1.679 -29.017 -35.812 1 48.73 ? C19 DMU 201 A 1 HETATM 11 C C22 DMU . . . E 3 -2.107 -30.227 -34.977 1 52.36 ? C22 DMU 201 A 1 HETATM 12 C C25 DMU . . . E 3 -2.82 -31.342 -35.736 1 43.3 ? C25 DMU 201 A 1 HETATM 13 C C28 DMU . . . E 3 -2.999 -32.615 -34.904 1 42.8 ? C28 DMU 201 A 1 HETATM 14 C C31 DMU . . . E 3 -3.728 -33.753 -35.607 1 54.58 ? C31 DMU 201 A 1 HETATM 15 C C34 DMU . . . E 3 -3.791 -35.048 -34.797 1 56.09 ? C34 DMU 201 A 1 HETATM 16 C C37 DMU . . . E 3 -2.475 -35.822 -34.722 1 55.74 ? C37 DMU 201 A 1 HETATM 17 C C40 DMU . . . E 3 -2.034 -36.429 -36.055 1 50.35 ? C40 DMU 201 A 1 HETATM 18 C C43 DMU . . . E 3 -0.767 -37.267 -35.954 1 51.09 ? C43 DMU 201 A 1 HETATM 19 O O49 DMU . . . E 3 -3.062 -24.086 -36.384 1 64.79 ? O49 DMU 201 A 1 HETATM 20 O O55 DMU . . . E 3 -1.017 -22.379 -37.299 1 55.75 ? O55 DMU 201 A 1 HETATM 21 C C57 DMU . . . E 3 1.512 -26.42 -38.668 1 55.29 ? C57 DMU 201 A 1 HETATM 22 O O61 DMU . . . E 3 2.286 -26.474 -37.466 1 45.7 ? O61 DMU 201 A 1 HETATM 23 C C5 DMU . . . E 3 1.141 -21.116 -39.611 1 62.62 ? C5 DMU 201 A 1 HETATM 24 C C7 DMU . . . E 3 1.558 -21.434 -41.036 1 66.79 ? C7 DMU 201 A 1 HETATM 25 C C8 DMU . . . E 3 3.046 -21.744 -41.087 1 57.63 ? C8 DMU 201 A 1 HETATM 26 C C9 DMU . . . E 3 3.355 -22.883 -40.114 1 59.02 ? C9 DMU 201 A 1 HETATM 27 O O1 DMU . . . E 3 2.936 -22.506 -38.791 1 59.67 ? O1 DMU 201 A 1 HETATM 28 C C10 DMU . . . E 3 1.526 -22.277 -38.694 1 64.11 ? C10 DMU 201 A 1 HETATM 29 O O2 DMU . . . E 3 3.434 -22.13 -42.409 1 58.32 ? O2 DMU 201 A 1 HETATM 30 O O3 DMU . . . E 3 -0.26 -20.854 -39.52 1 65.87 ? O3 DMU 201 A 1 HETATM 31 O O4 DMU . . . E 3 1.26 -20.338 -41.905 1 72.8 ? O4 DMU 201 A 1 HETATM 32 C C11 DMU . . . E 3 4.825 -23.209 -40.049 1 61.65 ? C11 DMU 201 A 1 HETATM 33 O O6 DMU . . . E 3 5.313 -23.639 -41.322 1 63.12 ? O6 DMU 201 A 1 HETATM 34 H H1 DMU . . . E 3 -1.221 -24.549 -35.847 1 71.84 ? H1 DMU 201 A 1 HETATM 35 H H2 DMU . . . E 3 -1.622 -23.761 -38.559 1 66.66 ? H2 DMU 201 A 1 HETATM 36 H H3 DMU . . . E 3 0.929 -24.249 -37.241 1 71.42 ? H3 DMU 201 A 1 HETATM 37 H H4 DMU . . . E 3 -0.38 -25.826 -39.248 1 64.86 ? H4 DMU 201 A 1 HETATM 38 H H5 DMU . . . E 3 -2.363 -26.201 -37.921 1 70.42 ? H5 DMU 201 A 1 HETATM 39 H H6 DMU . . . E 3 -2.991 -28.269 -37.214 1 65.73 ? H6 DMU 201 A 1 HETATM 40 H H7 DMU . . . E 3 -3.629 -28.353 -35.761 1 65.73 ? H7 DMU 201 A 1 HETATM 41 H H8 DMU . . . E 3 -1.054 -28.478 -35.283 1 58.47 ? H8 DMU 201 A 1 HETATM 42 H H9 DMU . . . E 3 -1.201 -29.338 -36.605 1 58.47 ? H9 DMU 201 A 1 HETATM 43 H H10 DMU . . . E 3 -1.309 -30.608 -34.554 1 62.84 ? H10 DMU 201 A 1 HETATM 44 H H11 DMU . . . E 3 -2.701 -29.915 -34.263 1 62.84 ? H11 DMU 201 A 1 HETATM 45 H H12 DMU . . . E 3 -2.308 -31.558 -36.543 1 51.96 ? H12 DMU 201 A 1 HETATM 46 H H13 DMU . . . E 3 -3.702 -31.021 -36.021 1 51.96 ? H13 DMU 201 A 1 HETATM 47 H H14 DMU . . . E 3 -3.493 -32.386 -34.09 1 51.36 ? H14 DMU 201 A 1 HETATM 48 H H15 DMU . . . E 3 -2.113 -32.935 -34.634 1 51.36 ? H15 DMU 201 A 1 HETATM 49 H H16 DMU . . . E 3 -3.278 -33.937 -36.459 1 65.49 ? H16 DMU 201 A 1 HETATM 50 H H17 DMU . . . E 3 -4.642 -33.464 -35.81 1 65.49 ? H17 DMU 201 A 1 HETATM 51 H H18 DMU . . . E 3 -4.473 -35.63 -35.192 1 67.31 ? H18 DMU 201 A 1 HETATM 52 H H19 DMU . . . E 3 -4.078 -34.831 -33.885 1 67.31 ? H19 DMU 201 A 1 HETATM 53 H H20 DMU . . . E 3 -1.772 -35.218 -34.403 1 66.89 ? H20 DMU 201 A 1 HETATM 54 H H21 DMU . . . E 3 -2.57 -36.542 -34.063 1 66.89 ? H21 DMU 201 A 1 HETATM 55 H H22 DMU . . . E 3 -1.885 -35.703 -36.699 1 60.42 ? H22 DMU 201 A 1 HETATM 56 H H23 DMU . . . E 3 -2.761 -36.992 -36.401 1 60.42 ? H23 DMU 201 A 1 HETATM 57 H H24 DMU . . . E 3 -0.034 -36.709 -35.643 1 61.31 ? H24 DMU 201 A 1 HETATM 58 H H25 DMU . . . E 3 -0.909 -37.995 -35.326 1 61.31 ? H25 DMU 201 A 1 HETATM 59 H H26 DMU . . . E 3 -0.549 -37.631 -36.828 1 61.31 ? H26 DMU 201 A 1 HETATM 60 H H27 DMU . . . E 3 -3.413 -24.548 -35.792 1 77.74 ? H27 DMU 201 A 1 HETATM 61 H H28 DMU . . . E 3 -0.559 -22.33 -36.61 1 66.91 ? H28 DMU 201 A 1 HETATM 62 H H29 DMU . . . E 3 1.375 -27.329 -39.006 1 66.35 ? H29 DMU 201 A 1 HETATM 63 H H30 DMU . . . E 3 2.005 -25.914 -39.348 1 66.35 ? H30 DMU 201 A 1 HETATM 64 H H31 DMU . . . E 3 2.991 -26.88 -37.61 1 54.83 ? H31 DMU 201 A 1 HETATM 65 H H32 DMU . . . E 3 1.605 -20.297 -39.316 1 75.14 ? H32 DMU 201 A 1 HETATM 66 H H33 DMU . . . E 3 1.048 -22.224 -41.346 1 80.15 ? H33 DMU 201 A 1 HETATM 67 H H34 DMU . . . E 3 3.562 -20.942 -40.839 1 69.15 ? H34 DMU 201 A 1 HETATM 68 H H35 DMU . . . E 3 2.858 -23.694 -40.387 1 70.83 ? H35 DMU 201 A 1 HETATM 69 H H36 DMU . . . E 3 1.249 -22.035 -37.775 1 76.93 ? H36 DMU 201 A 1 HETATM 70 H H37 DMU . . . E 3 3.261 -21.516 -42.939 1 69.99 ? H37 DMU 201 A 1 HETATM 71 H H38 DMU . . . E 3 -0.683 -21.519 -39.776 1 79.04 ? H38 DMU 201 A 1 HETATM 72 H H39 DMU . . . E 3 1.681 -19.668 -41.657 1 87.36 ? H39 DMU 201 A 1 HETATM 73 H H40 DMU . . . E 3 4.973 -23.917 -39.388 1 73.98 ? H40 DMU 201 A 1 HETATM 74 H H41 DMU . . . E 3 5.322 -22.416 -39.761 1 73.98 ? H41 DMU 201 A 1 HETATM 75 H H42 DMU . . . E 3 6.118 -23.818 -41.262 1 75.74 ? H42 DMU 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 75 #