data_7KL8
#
_model_server_result.job_id            azJ_nySp-nHjexUo55jHyQ 
_model_server_result.datetime_utc      '2024-11-13 04:40:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kl8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":201}' 
#
_entry.id    7KL8 
#
_exptl.entry_id    7KL8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              773.593 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COENZYME F420' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7KL8 
_cell.length_a            169.544 
_cell.length_b            169.544 
_cell.length_c            169.544 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7KL8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        212 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C29 H36 N5 O18 P' 
_chem_comp.formula_weight    773.593 
_chem_comp.id                F42 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COENZYME F420' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 F42 sing 177 n y 
N1 C10 F42 doub 178 n y 
C2 O2 F42 doub 179 n n 
C2 N3 F42 sing 180 n y 
N3 C4 F42 sing 181 n y 
N3 HN3 F42 sing 182 n n 
C4 O4 F42 doub 183 n n 
C4 C4A F42 sing 184 n y 
C4A C5 F42 doub 185 n y 
C4A C10 F42 sing 186 n y 
C5 C5A F42 sing 187 n y 
C5 H5 F42 sing 188 n n 
C5A C6 F42 doub 189 n y 
C5A C9A F42 sing 190 n y 
C6 C7 F42 sing 191 n y 
C6 H6 F42 sing 192 n n 
C7 C8 F42 doub 193 n y 
C7 HC7 F42 sing 194 n n 
C8 O8M F42 sing 195 n n 
C8 C9 F42 sing 196 n y 
O8M HM81 F42 sing 197 n n 
C9 C9A F42 doub 198 n y 
C9 H9 F42 sing 199 n n 
C9A N10 F42 sing 200 n y 
N10 C10 F42 sing 201 n y 
N10 C1' F42 sing 202 n n 
C1' C2' F42 sing 203 n n 
C1' "H1'1" F42 sing 204 n n 
C1' "H1'2" F42 sing 205 n n 
C2' O2' F42 sing 206 n n 
C2' C3' F42 sing 207 n n 
C2' H2' F42 sing 208 n n 
O2' HO2' F42 sing 209 n n 
C3' O3' F42 sing 210 n n 
C3' C4' F42 sing 211 n n 
C3' H3' F42 sing 212 n n 
O3' HO3' F42 sing 213 n n 
C4' O4' F42 sing 214 n n 
C4' C5' F42 sing 215 n n 
C4' H4' F42 sing 216 n n 
O4' HO4' F42 sing 217 n n 
C5' O5' F42 sing 218 n n 
C5' "H5'1" F42 sing 219 n n 
C5' "H5'2" F42 sing 220 n n 
O5' P F42 sing 221 n n 
P O1P F42 doub 222 n n 
P O2P F42 sing 223 n n 
P O3P F42 sing 224 n n 
O2P HOP2 F42 sing 225 n n 
O3P C1I F42 sing 226 n n 
C1I C2I F42 sing 227 n n 
C1I C3I F42 sing 228 n n 
C1I H1I1 F42 sing 229 n n 
C2I H2I1 F42 sing 230 n n 
C2I H2I2 F42 sing 231 n n 
C2I H2I3 F42 sing 232 n n 
C3I O3I F42 doub 233 n n 
C3I N1H F42 sing 234 n n 
N1H C1H F42 sing 235 n n 
N1H HNH1 F42 sing 236 n n 
C1H C2H F42 sing 237 n n 
C1H C3H F42 sing 238 n n 
C1H H1H1 F42 sing 239 n n 
C2H O2U F42 sing 240 n n 
C2H O2T F42 doub 241 n n 
O2U HXU F42 sing 242 n n 
C3H C4H F42 sing 243 n n 
C3H H3H1 F42 sing 244 n n 
C3H H3H2 F42 sing 245 n n 
C4H C5H F42 sing 246 n n 
C4H H4H1 F42 sing 247 n n 
C4H H4H2 F42 sing 248 n n 
C5H O5H F42 doub 249 n n 
C5H N1G F42 sing 250 n n 
N1G C1G F42 sing 251 n n 
N1G HNG1 F42 sing 252 n n 
C1G C2G F42 sing 253 n n 
C1G C3G F42 sing 254 n n 
C1G H1G1 F42 sing 255 n n 
C2G O2V F42 sing 256 n n 
C2G O2W F42 doub 257 n n 
O2V HXV F42 sing 258 n n 
C3G C4G F42 sing 259 n n 
C3G H3G1 F42 sing 260 n n 
C3G H3G2 F42 sing 261 n n 
C4G C5G F42 sing 262 n n 
C4G H4G1 F42 sing 263 n n 
C4G H4G2 F42 sing 264 n n 
C5G O6G F42 sing 265 n n 
C5G O7G F42 doub 266 n n 
O6G HXT F42 sing 267 n n 
#
_atom_sites.entry_id                     7KL8 
_atom_sites.fract_transf_matrix[1][1]    0.005898 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005898 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005898 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 6J4 A 1 401 401 6J4 6J4 . 
D 3 SO4 A 1 402 1 SO4 SO4 . 
E 3 SO4 A 1 403 2 SO4 SO4 . 
F 3 SO4 A 1 404 3 SO4 SO4 . 
G 3 SO4 A 1 405 5 SO4 SO4 . 
H 4 F42 B 1 201 201 F42 F42 . 
I 3 SO4 B 1 202 4 SO4 SO4 . 
J 3 SO4 B 1 203 6 SO4 SO4 . 
K 5 HOH A 1 501 63 HOH HOH . 
K 5 HOH A 2 502 31 HOH HOH . 
K 5 HOH A 3 503 21 HOH HOH . 
K 5 HOH A 4 504 17 HOH HOH . 
K 5 HOH A 5 505 40 HOH HOH . 
K 5 HOH A 6 506 4 HOH HOH . 
K 5 HOH A 7 507 45 HOH HOH . 
K 5 HOH A 8 508 57 HOH HOH . 
K 5 HOH A 9 509 18 HOH HOH . 
K 5 HOH A 10 510 20 HOH HOH . 
K 5 HOH A 11 511 41 HOH HOH . 
K 5 HOH A 12 512 73 HOH HOH . 
K 5 HOH A 13 513 74 HOH HOH . 
K 5 HOH A 14 514 42 HOH HOH . 
L 5 HOH B 1 301 29 HOH HOH . 
L 5 HOH B 2 302 13 HOH HOH . 
L 5 HOH B 3 303 59 HOH HOH . 
L 5 HOH B 4 304 32 HOH HOH . 
L 5 HOH B 5 305 80 HOH HOH . 
L 5 HOH B 6 306 54 HOH HOH . 
L 5 HOH B 7 307 75 HOH HOH . 
L 5 HOH B 8 308 55 HOH HOH . 
L 5 HOH B 9 309 8 HOH HOH . 
L 5 HOH B 10 310 51 HOH HOH . 
L 5 HOH B 11 311 35 HOH HOH . 
L 5 HOH B 12 312 39 HOH HOH . 
L 5 HOH B 13 313 34 HOH HOH . 
L 5 HOH B 14 314 14 HOH HOH . 
L 5 HOH B 15 315 44 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 F42 . . . H 4 -1.306 -4.92 -23.75 1 72.37 ? N1 F42 201 B 1 
HETATM 2 C C2 F42 . . . H 4 -0.622 -3.9 -24.312 1 76.54 ? C2 F42 201 B 1 
HETATM 3 O O2 F42 . . . H 4 0.601 -3.974 -24.474 1 69.52 ? O2 F42 201 B 1 
HETATM 4 N N3 F42 . . . H 4 -1.233 -2.744 -24.707 1 81.68 ? N3 F42 201 B 1 
HETATM 5 C C4 F42 . . . H 4 -2.584 -2.535 -24.57 1 82.63 ? C4 F42 201 B 1 
HETATM 6 O O4 F42 . . . H 4 -3.08 -1.477 -24.961 1 76.82 ? O4 F42 201 B 1 
HETATM 7 C C4A F42 . . . H 4 -3.345 -3.643 -23.982 1 80.75 ? C4A F42 201 B 1 
HETATM 8 C C5 F42 . . . H 4 -4.731 -3.595 -23.783 1 78.44 ? C5 F42 201 B 1 
HETATM 9 C C5A F42 . . . H 4 -5.421 -4.686 -23.243 1 78 ? C5A F42 201 B 1 
HETATM 10 C C6 F42 . . . H 4 -6.815 -4.661 -23.068 1 80.51 ? C6 F42 201 B 1 
HETATM 11 C C7 F42 . . . H 4 -7.48 -5.75 -22.557 1 81.08 ? C7 F42 201 B 1 
HETATM 12 C C8 F42 . . . H 4 -6.762 -6.898 -22.181 1 75.68 ? C8 F42 201 B 1 
HETATM 13 O O8M F42 . . . H 4 -7.419 -7.975 -21.676 1 75.91 ? O8M F42 201 B 1 
HETATM 14 C C9 F42 . . . H 4 -5.388 -6.94 -22.323 1 75.19 ? C9 F42 201 B 1 
HETATM 15 C C9A F42 . . . H 4 -4.703 -5.835 -22.869 1 79.39 ? C9A F42 201 B 1 
HETATM 16 N N10 F42 . . . H 4 -3.321 -5.876 -23.036 1 79.36 ? N10 F42 201 B 1 
HETATM 17 C C10 F42 . . . H 4 -2.636 -4.807 -23.597 1 77.8 ? C10 F42 201 B 1 
HETATM 18 C C1' F42 . . . H 4 -2.574 -7.079 -22.647 1 74.77 ? C1' F42 201 B 1 
HETATM 19 C C2' F42 . . . H 4 -1.924 -7.72 -23.835 1 75.6 ? C2' F42 201 B 1 
HETATM 20 O O2' F42 . . . H 4 -2.76 -8.783 -24.309 1 64.19 ? O2' F42 201 B 1 
HETATM 21 C C3' F42 . . . H 4 -0.531 -8.17 -23.39 1 75.56 ? C3' F42 201 B 1 
HETATM 22 O O3' F42 . . . H 4 0.504 -7.528 -24.139 1 73.88 ? O3' F42 201 B 1 
HETATM 23 C C4' F42 . . . H 4 -0.372 -9.679 -23.478 1 80.68 ? C4' F42 201 B 1 
HETATM 24 O O4' F42 . . . H 4 -1.447 -10.28 -22.752 1 77.42 ? O4' F42 201 B 1 
HETATM 25 C C5' F42 . . . H 4 0.968 -10.1 -22.93 1 93.98 ? C5' F42 201 B 1 
HETATM 26 O O5' F42 . . . H 4 1.953 -9.862 -23.968 1 86.67 ? O5' F42 201 B 1 
HETATM 27 P P F42 . . . H 4 2.675 -11.113 -24.665 1 89.59 ? P F42 201 B 1 
HETATM 28 O O1P F42 . . . H 4 2.255 -11.279 -26.1 1 74.04 ? O1P F42 201 B 1 
HETATM 29 O O2P F42 . . . H 4 4.119 -10.911 -24.293 1 88.34 ? O2P F42 201 B 1 
HETATM 30 O O3P F42 . . . H 4 2.089 -12.387 -23.878 1 103.99 ? O3P F42 201 B 1 
HETATM 31 C C1I F42 . . . H 4 2.76 -13.65 -23.809 1 101.89 ? C1I F42 201 B 1 
HETATM 32 C C2I F42 . . . H 4 2.957 -14.023 -22.354 1 96.76 ? C2I F42 201 B 1 
HETATM 33 C C3I F42 . . . H 4 1.97 -14.74 -24.527 1 99.42 ? C3I F42 201 B 1 
HETATM 34 O O3I F42 . . . H 4 0.828 -14.518 -24.924 1 98.78 ? O3I F42 201 B 1 
HETATM 35 N N1H F42 . . . H 4 2.581 -15.912 -24.704 1 102.74 ? N1H F42 201 B 1 
HETATM 36 C C1H F42 . . . H 4 2.103 -16.931 -25.626 1 103.14 ? C1H F42 201 B 1 
HETATM 37 C C2H F42 . . . H 4 2.765 -18.288 -25.312 1 109.11 ? C2H F42 201 B 1 
HETATM 38 O O2U F42 . . . H 4 3.78 -18.277 -24.58 1 112.67 ? O2U F42 201 B 1 
HETATM 39 O O2T F42 . . . H 4 2.254 -19.309 -25.817 1 98.61 ? O2T F42 201 B 1 
HETATM 40 C C3H F42 . . . H 4 2.327 -16.541 -27.095 1 91.81 ? C3H F42 201 B 1 
HETATM 41 C C4H F42 . . . H 4 3.74 -16.042 -27.368 1 85.09 ? C4H F42 201 B 1 
HETATM 42 C C5H F42 . . . H 4 4.129 -16.007 -28.832 1 80.5 ? C5H F42 201 B 1 
HETATM 43 O O5H F42 . . . H 4 3.593 -15.236 -29.624 1 78.77 ? O5H F42 201 B 1 
HETATM 44 N N1G F42 . . . H 4 5.094 -16.85 -29.207 1 78.59 ? N1G F42 201 B 1 
HETATM 45 C C1G F42 . . . H 4 5.978 -16.647 -30.344 1 78.99 ? C1G F42 201 B 1 
HETATM 46 C C2G F42 . . . H 4 5.59 -17.614 -31.476 1 73.91 ? C2G F42 201 B 1 
HETATM 47 O O2V F42 . . . H 4 4.544 -18.275 -31.32 1 61.82 ? O2V F42 201 B 1 
HETATM 48 O O2W F42 . . . H 4 6.338 -17.666 -32.476 1 76.1 ? O2W F42 201 B 1 
HETATM 49 C C3G F42 . . . H 4 7.471 -16.771 -29.995 1 96.88 ? C3G F42 201 B 1 
HETATM 50 C C4G F42 . . . H 4 7.774 -16.859 -28.501 1 108.64 ? C4G F42 201 B 1 
HETATM 51 C C5G F42 . . . H 4 9.244 -17.031 -28.141 1 114.34 ? C5G F42 201 B 1 
HETATM 52 O O6G F42 . . . H 4 10.106 -16.477 -28.859 1 104.33 ? O6G F42 201 B 1 
HETATM 53 O O7G F42 . . . H 4 9.527 -17.724 -27.139 1 114.79 ? O7G F42 201 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           53 
#