data_7KL8
#
_model_server_result.job_id            T7edQt6joQEmSNXR86yGKA 
_model_server_result.datetime_utc      '2024-11-24 12:29:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kl8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    7KL8 
#
_exptl.entry_id    7KL8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              902.707 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COENZYME F420-3' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7KL8 
_cell.length_a            169.544 
_cell.length_b            169.544 
_cell.length_c            169.544 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7KL8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        212 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C34 H43 N6 O21 P' 
_chem_comp.formula_weight    902.707 
_chem_comp.id                6J4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COENZYME F420-3' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C2 6J4 doub 1 n n 
N3 C2 6J4 sing 2 n n 
N3 C4 6J4 sing 3 n n 
C2 N1 6J4 sing 4 n n 
O4 C4 6J4 doub 5 n n 
C4 C4A 6J4 sing 6 n n 
N1 C10 6J4 doub 7 n n 
C4A C10 6J4 sing 8 n n 
C4A C5 6J4 doub 9 n n 
C10 N10 6J4 sing 10 n n 
C5 C5A 6J4 sing 11 n n 
O2W C2G 6J4 doub 12 n n 
N10 C1' 6J4 sing 13 n n 
N10 C9A 6J4 sing 14 n n 
O4' C4' 6J4 sing 15 n n 
C5A C9A 6J4 doub 16 n y 
C5A C6 6J4 sing 17 n y 
O2V C2G 6J4 sing 18 n n 
C1' C2' 6J4 sing 19 n n 
C9A C9 6J4 sing 20 n y 
C4' C5' 6J4 sing 21 n n 
C4' C3' 6J4 sing 22 n n 
C6 C7 6J4 doub 23 n y 
C2G C1G 6J4 sing 24 n n 
C9 C8 6J4 doub 25 n y 
C5' O5' 6J4 sing 26 n n 
C7 C8 6J4 sing 27 n y 
C8 O8M 6J4 sing 28 n n 
O3' C3' 6J4 sing 29 n n 
C3G C1G 6J4 sing 30 n n 
C3G C4G 6J4 sing 31 n n 
C3' C2' 6J4 sing 32 n n 
C2' O2' 6J4 sing 33 n n 
O1P P 6J4 doub 34 n n 
C1G N1G 6J4 sing 35 n n 
O5' P 6J4 sing 36 n n 
N1G C5H 6J4 sing 37 n n 
P O2P 6J4 sing 38 n n 
P O3P 6J4 sing 39 n n 
C4G C5G 6J4 sing 40 n n 
O6G C5G 6J4 doub 41 n n 
C5G N7G 6J4 sing 42 n n 
C5H O5H 6J4 doub 43 n n 
C5H C4H 6J4 sing 44 n n 
O3P C1I 6J4 sing 45 n n 
C1I C2I 6J4 sing 46 n n 
C1I C3I 6J4 sing 47 n n 
C4H C3H 6J4 sing 48 n n 
C3H C1H 6J4 sing 49 n n 
N1H C3I 6J4 sing 50 n n 
N1H C1H 6J4 sing 51 n n 
O2T C2H 6J4 doub 52 n n 
N7G C1 6J4 sing 53 n n 
C3I O3I 6J4 doub 54 n n 
C1H C2H 6J4 sing 55 n n 
C2H O2U 6J4 sing 56 n n 
C12 C13 6J4 sing 57 n n 
C12 C11 6J4 sing 58 n n 
C1 C11 6J4 sing 59 n n 
C1 C3 6J4 sing 60 n n 
C13 O14 6J4 doub 61 n n 
C13 O15 6J4 sing 62 n n 
C3 O3 6J4 doub 63 n n 
C3 O1 6J4 sing 64 n n 
N7G H1 6J4 sing 65 n n 
C4G H2 6J4 sing 66 n n 
C4G H3 6J4 sing 67 n n 
C3G H4 6J4 sing 68 n n 
C3G H5 6J4 sing 69 n n 
C1G H6 6J4 sing 70 n n 
O2V H7 6J4 sing 71 n n 
N1G H8 6J4 sing 72 n n 
C4H H9 6J4 sing 73 n n 
C4H H10 6J4 sing 74 n n 
C3H H11 6J4 sing 75 n n 
C3H H12 6J4 sing 76 n n 
C1H H13 6J4 sing 77 n n 
O2U H14 6J4 sing 78 n n 
N1H H15 6J4 sing 79 n n 
C1I H16 6J4 sing 80 n n 
C2I H17 6J4 sing 81 n n 
C2I H18 6J4 sing 82 n n 
C2I H19 6J4 sing 83 n n 
O2P H20 6J4 sing 84 n n 
C5' H21 6J4 sing 85 n n 
C5' H22 6J4 sing 86 n n 
C4' H23 6J4 sing 87 n n 
O4' H24 6J4 sing 88 n n 
C3' H25 6J4 sing 89 n n 
O3' H26 6J4 sing 90 n n 
C2' H27 6J4 sing 91 n n 
O2' H28 6J4 sing 92 n n 
C1' H29 6J4 sing 93 n n 
C1' H30 6J4 sing 94 n n 
C9 H31 6J4 sing 95 n n 
O8M H32 6J4 sing 96 n n 
C7 H33 6J4 sing 97 n n 
C6 H34 6J4 sing 98 n n 
C5 H35 6J4 sing 99 n n 
N3 H37 6J4 sing 100 n n 
C1 H38 6J4 sing 101 n n 
C11 H39 6J4 sing 102 n n 
C11 H40 6J4 sing 103 n n 
O1 H41 6J4 sing 104 n n 
C12 H42 6J4 sing 105 n n 
C12 H43 6J4 sing 106 n n 
O15 H44 6J4 sing 107 n n 
#
_atom_sites.entry_id                     7KL8 
_atom_sites.fract_transf_matrix[1][1]    0.005898 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005898 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005898 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 6J4 A 1 401 401 6J4 6J4 . 
D 3 SO4 A 1 402 1 SO4 SO4 . 
E 3 SO4 A 1 403 2 SO4 SO4 . 
F 3 SO4 A 1 404 3 SO4 SO4 . 
G 3 SO4 A 1 405 5 SO4 SO4 . 
H 4 F42 B 1 201 201 F42 F42 . 
I 3 SO4 B 1 202 4 SO4 SO4 . 
J 3 SO4 B 1 203 6 SO4 SO4 . 
K 5 HOH A 1 501 63 HOH HOH . 
K 5 HOH A 2 502 31 HOH HOH . 
K 5 HOH A 3 503 21 HOH HOH . 
K 5 HOH A 4 504 17 HOH HOH . 
K 5 HOH A 5 505 40 HOH HOH . 
K 5 HOH A 6 506 4 HOH HOH . 
K 5 HOH A 7 507 45 HOH HOH . 
K 5 HOH A 8 508 57 HOH HOH . 
K 5 HOH A 9 509 18 HOH HOH . 
K 5 HOH A 10 510 20 HOH HOH . 
K 5 HOH A 11 511 41 HOH HOH . 
K 5 HOH A 12 512 73 HOH HOH . 
K 5 HOH A 13 513 74 HOH HOH . 
K 5 HOH A 14 514 42 HOH HOH . 
L 5 HOH B 1 301 29 HOH HOH . 
L 5 HOH B 2 302 13 HOH HOH . 
L 5 HOH B 3 303 59 HOH HOH . 
L 5 HOH B 4 304 32 HOH HOH . 
L 5 HOH B 5 305 80 HOH HOH . 
L 5 HOH B 6 306 54 HOH HOH . 
L 5 HOH B 7 307 75 HOH HOH . 
L 5 HOH B 8 308 55 HOH HOH . 
L 5 HOH B 9 309 8 HOH HOH . 
L 5 HOH B 10 310 51 HOH HOH . 
L 5 HOH B 11 311 35 HOH HOH . 
L 5 HOH B 12 312 39 HOH HOH . 
L 5 HOH B 13 313 34 HOH HOH . 
L 5 HOH B 14 314 14 HOH HOH . 
L 5 HOH B 15 315 44 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C3I 6J4 . . . C 2 -4.69 -17.216 -54.037 1 96.43 ? C3I 6J4 401 A 1 
HETATM 2 O O3I 6J4 . . . C 2 -5.481 -16.661 -53.279 1 92.87 ? O3I 6J4 401 A 1 
HETATM 3 C C1I 6J4 . . . C 2 -5.086 -18.502 -54.719 1 101.72 ? C1I 6J4 401 A 1 
HETATM 4 C C2I 6J4 . . . C 2 -5.34 -18.239 -56.188 1 96.52 ? C2I 6J4 401 A 1 
HETATM 5 O O3P 6J4 . . . C 2 -6.244 -19.028 -54.074 1 101.81 ? O3P 6J4 401 A 1 
HETATM 6 P P 6J4 . . . C 2 -6.446 -20.568 -53.66 1 93.76 ? P 6J4 401 A 1 
HETATM 7 O O1P 6J4 . . . C 2 -6.283 -20.653 -52.167 1 71.42 ? O1P 6J4 401 A 1 
HETATM 8 O O2P 6J4 . . . C 2 -5.593 -21.427 -54.555 1 84.65 ? O2P 6J4 401 A 1 
HETATM 9 O O5' 6J4 . . . C 2 -7.988 -20.742 -54.087 1 81.32 ? O5' 6J4 401 A 1 
HETATM 10 C C5' 6J4 . . . C 2 -8.678 -21.978 -53.823 1 77.18 ? C5' 6J4 401 A 1 
HETATM 11 C C4' 6J4 . . . C 2 -10.177 -21.818 -53.738 1 73.71 ? C4' 6J4 401 A 1 
HETATM 12 O O4' 6J4 . . . C 2 -10.694 -23.09 -53.341 1 77 ? O4' 6J4 401 A 1 
HETATM 13 C C3' 6J4 . . . C 2 -10.63 -20.743 -52.744 1 72.16 ? C3' 6J4 401 A 1 
HETATM 14 O O3' 6J4 . . . C 2 -10.765 -19.489 -53.396 1 75.14 ? O3' 6J4 401 A 1 
HETATM 15 C C2' 6J4 . . . C 2 -11.948 -21.061 -52.031 1 71.27 ? C2' 6J4 401 A 1 
HETATM 16 O O2' 6J4 . . . C 2 -12.374 -19.952 -51.26 1 70.01 ? O2' 6J4 401 A 1 
HETATM 17 C C1' 6J4 . . . C 2 -13.087 -21.434 -52.962 1 76.1 ? C1' 6J4 401 A 1 
HETATM 18 N N10 6J4 . . . C 2 -14.129 -22.179 -52.23 1 78.72 ? N10 6J4 401 A 1 
HETATM 19 C C9A 6J4 . . . C 2 -15.312 -21.554 -51.829 1 81.9 ? C9A 6J4 401 A 1 
HETATM 20 C C9 6J4 . . . C 2 -15.562 -20.199 -52.144 1 84.78 ? C9 6J4 401 A 1 
HETATM 21 C C8 6J4 . . . C 2 -16.74 -19.595 -51.73 1 87.5 ? C8 6J4 401 A 1 
HETATM 22 O O8M 6J4 . . . C 2 -16.981 -18.289 -52.027 1 89.07 ? O8M 6J4 401 A 1 
HETATM 23 C C7 6J4 . . . C 2 -17.699 -20.326 -51.005 1 84.06 ? C7 6J4 401 A 1 
HETATM 24 C C6 6J4 . . . C 2 -17.473 -21.646 -50.707 1 78.39 ? C6 6J4 401 A 1 
HETATM 25 C C5A 6J4 . . . C 2 -16.28 -22.278 -51.103 1 81.59 ? C5A 6J4 401 A 1 
HETATM 26 C C5 6J4 . . . C 2 -16.039 -23.612 -50.789 1 82.79 ? C5 6J4 401 A 1 
HETATM 27 C C10 6J4 . . . C 2 -13.885 -23.5 -51.892 1 80.94 ? C10 6J4 401 A 1 
HETATM 28 N N1 6J4 . . . C 2 -12.722 -24.042 -52.278 1 78.87 ? N1 6J4 401 A 1 
HETATM 29 C C4A 6J4 . . . C 2 -14.851 -24.236 -51.16 1 83.8 ? C4A 6J4 401 A 1 
HETATM 30 C C4 6J4 . . . C 2 -14.554 -25.633 -50.824 1 78.39 ? C4 6J4 401 A 1 
HETATM 31 O O4 6J4 . . . C 2 -15.3 -26.369 -50.176 1 80.1 ? O4 6J4 401 A 1 
HETATM 32 N N3 6J4 . . . C 2 -13.338 -26.1 -51.25 1 74.7 ? N3 6J4 401 A 1 
HETATM 33 C C2 6J4 . . . C 2 -12.458 -25.327 -51.948 1 79.34 ? C2 6J4 401 A 1 
HETATM 34 O O2 6J4 . . . C 2 -11.396 -25.853 -52.282 1 76.73 ? O2 6J4 401 A 1 
HETATM 35 N N1H 6J4 . . . C 2 -3.467 -16.748 -54.282 1 99.99 ? N1H 6J4 401 A 1 
HETATM 36 C C1H 6J4 . . . C 2 -2.841 -15.751 -53.429 1 103.46 ? C1H 6J4 401 A 1 
HETATM 37 C C2H 6J4 . . . C 2 -1.647 -15.098 -54.156 1 104.67 ? C2H 6J4 401 A 1 
HETATM 38 O O2T 6J4 . . . C 2 -1.381 -15.51 -55.305 1 97.64 ? O2T 6J4 401 A 1 
HETATM 39 C C3H 6J4 . . . C 2 -2.457 -16.32 -52.053 1 95.44 ? C3H 6J4 401 A 1 
HETATM 40 C C4H 6J4 . . . C 2 -1.974 -17.766 -52.091 1 90.38 ? C4H 6J4 401 A 1 
HETATM 41 C C5H 6J4 . . . C 2 -1.148 -18.17 -50.884 1 81.52 ? C5H 6J4 401 A 1 
HETATM 42 O O5H 6J4 . . . C 2 -1.675 -18.554 -49.845 1 78.15 ? O5H 6J4 401 A 1 
HETATM 43 O O2U 6J4 . . . C 2 -1.033 -14.19 -53.556 1 110.09 ? O2U 6J4 401 A 1 
HETATM 44 N N1G 6J4 . . . C 2 0.177 -18.129 -51.034 1 76.69 ? N1G 6J4 401 A 1 
HETATM 45 C C1G 6J4 . . . C 2 1.144 -18.801 -50.182 1 82.5 ? C1G 6J4 401 A 1 
HETATM 46 C C2G 6J4 . . . C 2 1.795 -17.789 -49.221 1 80.82 ? C2G 6J4 401 A 1 
HETATM 47 O O2W 6J4 . . . C 2 1.185 -16.721 -49.038 1 74.9 ? O2W 6J4 401 A 1 
HETATM 48 C C3G 6J4 . . . C 2 2.202 -19.552 -51.002 1 94.9 ? C3G 6J4 401 A 1 
HETATM 49 C C4G 6J4 . . . C 2 2.623 -20.887 -50.399 1 104.1 ? C4G 6J4 401 A 1 
HETATM 50 C C5G 6J4 . . . C 2 2.974 -21.906 -51.467 1 112.76 ? C5G 6J4 401 A 1 
HETATM 51 O O6G 6J4 . . . C 2 2.175 -22.202 -52.353 1 123.5 ? O6G 6J4 401 A 1 
HETATM 52 O O2V 6J4 . . . C 2 2.887 -18.097 -48.695 1 75.18 ? O2V 6J4 401 A 1 
HETATM 53 N N7G 6J4 . . . C 2 4.181 -22.474 -51.376 1 117.33 ? N7G 6J4 401 A 1 
HETATM 54 C C1 6J4 . . . C 2 4.975 -23.001 -52.48 1 118.81 ? C1 6J4 401 A 1 
HETATM 55 C C3 6J4 . . . C 2 5.584 -21.853 -53.314 1 117.18 ? C3 6J4 401 A 1 
HETATM 56 O O3 6J4 . . . C 2 6.808 -21.916 -53.567 1 97.85 ? O3 6J4 401 A 1 
HETATM 57 C C11 6J4 . . . C 2 4.198 -23.993 -53.358 1 114.72 ? C11 6J4 401 A 1 
HETATM 58 C C12 6J4 . . . C 2 5.068 -25.086 -53.969 1 118.16 ? C12 6J4 401 A 1 
HETATM 59 C C13 6J4 . . . C 2 4.407 -26.453 -54.065 1 114.88 ? C13 6J4 401 A 1 
HETATM 60 O O14 6J4 . . . C 2 3.168 -26.485 -54.174 1 108.8 ? O14 6J4 401 A 1 
HETATM 61 O O15 6J4 . . . C 2 5.128 -27.482 -54.041 1 101.17 ? O15 6J4 401 A 1 
HETATM 62 O O1 6J4 . . . C 2 4.824 -20.928 -53.676 1 122.62 ? O1 6J4 401 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           62 
#