data_7KMW
#
_model_server_result.job_id            iLIJNDqQcqgyuI4WQOwGpA 
_model_server_result.datetime_utc      '2025-07-30 23:16:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kmw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":301}' 
#
_entry.id    7KMW 
#
_exptl.entry_id    7KMW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          126.75 
_cell.angle_gamma         90 
_cell.entry_id            7KMW 
_cell.length_a            194.13 
_cell.length_b            45.62 
_cell.length_c            121.56 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7KMW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,Q 1 1 
B,I,R 2 1 
C,J,K,L,M,S 3 1 
D,N,O,P,T 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7KMW 
_atom_sites.fract_transf_matrix[1][1]    0.005151 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003847 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02192 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010267 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 EDO A 1 301 301 EDO EDO . 
F 2 EDO A 1 302 301 EDO EDO . 
G 2 EDO A 1 303 1 EDO EDO . 
H 2 EDO A 1 304 4 EDO EDO . 
I 2 EDO B 1 301 2 EDO EDO . 
J 2 EDO C 1 301 301 EDO EDO . 
K 2 EDO C 1 302 3 EDO EDO . 
L 2 EDO C 1 303 5 EDO EDO . 
M 2 EDO C 1 304 6 EDO EDO . 
N 2 EDO D 1 401 401 EDO EDO . 
O 2 EDO D 1 402 501 EDO EDO . 
P 2 EDO D 1 403 7 EDO EDO . 
Q 3 HOH A 1 401 407 HOH HOH . 
Q 3 HOH A 2 402 45 HOH HOH . 
Q 3 HOH A 3 403 360 HOH HOH . 
Q 3 HOH A 4 404 410 HOH HOH . 
Q 3 HOH A 5 405 60 HOH HOH . 
Q 3 HOH A 6 406 325 HOH HOH . 
Q 3 HOH A 7 407 63 HOH HOH . 
Q 3 HOH A 8 408 93 HOH HOH . 
Q 3 HOH A 9 409 68 HOH HOH . 
Q 3 HOH A 10 410 253 HOH HOH . 
Q 3 HOH A 11 411 145 HOH HOH . 
Q 3 HOH A 12 412 202 HOH HOH . 
Q 3 HOH A 13 413 155 HOH HOH . 
Q 3 HOH A 14 414 242 HOH HOH . 
Q 3 HOH A 15 415 142 HOH HOH . 
Q 3 HOH A 16 416 219 HOH HOH . 
Q 3 HOH A 17 417 106 HOH HOH . 
Q 3 HOH A 18 418 200 HOH HOH . 
Q 3 HOH A 19 419 199 HOH HOH . 
Q 3 HOH A 20 420 277 HOH HOH . 
Q 3 HOH A 21 421 25 HOH HOH . 
Q 3 HOH A 22 422 295 HOH HOH . 
Q 3 HOH A 23 423 194 HOH HOH . 
Q 3 HOH A 24 424 371 HOH HOH . 
Q 3 HOH A 25 425 333 HOH HOH . 
Q 3 HOH A 26 426 159 HOH HOH . 
Q 3 HOH A 27 427 162 HOH HOH . 
Q 3 HOH A 28 428 67 HOH HOH . 
Q 3 HOH A 29 429 52 HOH HOH . 
Q 3 HOH A 30 430 285 HOH HOH . 
Q 3 HOH A 31 431 320 HOH HOH . 
Q 3 HOH A 32 432 196 HOH HOH . 
Q 3 HOH A 33 433 160 HOH HOH . 
Q 3 HOH A 34 434 134 HOH HOH . 
Q 3 HOH A 35 435 87 HOH HOH . 
Q 3 HOH A 36 436 328 HOH HOH . 
Q 3 HOH A 37 437 248 HOH HOH . 
Q 3 HOH A 38 438 280 HOH HOH . 
Q 3 HOH A 39 439 240 HOH HOH . 
Q 3 HOH A 40 440 332 HOH HOH . 
Q 3 HOH A 41 441 154 HOH HOH . 
Q 3 HOH A 42 442 197 HOH HOH . 
Q 3 HOH A 43 443 223 HOH HOH . 
Q 3 HOH A 44 444 279 HOH HOH . 
Q 3 HOH A 45 445 161 HOH HOH . 
Q 3 HOH A 46 446 244 HOH HOH . 
Q 3 HOH A 47 447 359 HOH HOH . 
Q 3 HOH A 48 448 75 HOH HOH . 
Q 3 HOH A 49 449 246 HOH HOH . 
Q 3 HOH A 50 450 340 HOH HOH . 
Q 3 HOH A 51 451 368 HOH HOH . 
Q 3 HOH A 52 452 411 HOH HOH . 
Q 3 HOH A 53 453 327 HOH HOH . 
Q 3 HOH A 54 454 306 HOH HOH . 
Q 3 HOH A 55 455 243 HOH HOH . 
Q 3 HOH A 56 456 205 HOH HOH . 
Q 3 HOH A 57 457 366 HOH HOH . 
Q 3 HOH A 58 458 334 HOH HOH . 
Q 3 HOH A 59 459 201 HOH HOH . 
Q 3 HOH A 60 460 331 HOH HOH . 
R 3 HOH B 1 401 69 HOH HOH . 
R 3 HOH B 2 402 254 HOH HOH . 
R 3 HOH B 3 403 288 HOH HOH . 
R 3 HOH B 4 404 290 HOH HOH . 
R 3 HOH B 5 405 164 HOH HOH . 
R 3 HOH B 6 406 163 HOH HOH . 
R 3 HOH B 7 407 257 HOH HOH . 
R 3 HOH B 8 408 14 HOH HOH . 
R 3 HOH B 9 409 89 HOH HOH . 
R 3 HOH B 10 410 133 HOH HOH . 
R 3 HOH B 11 411 84 HOH HOH . 
R 3 HOH B 12 412 85 HOH HOH . 
R 3 HOH B 13 413 264 HOH HOH . 
R 3 HOH B 14 414 262 HOH HOH . 
R 3 HOH B 15 415 336 HOH HOH . 
R 3 HOH B 16 416 77 HOH HOH . 
R 3 HOH B 17 417 258 HOH HOH . 
R 3 HOH B 18 418 88 HOH HOH . 
R 3 HOH B 19 419 51 HOH HOH . 
R 3 HOH B 20 420 70 HOH HOH . 
R 3 HOH B 21 421 383 HOH HOH . 
R 3 HOH B 22 422 321 HOH HOH . 
R 3 HOH B 23 423 59 HOH HOH . 
R 3 HOH B 24 424 38 HOH HOH . 
R 3 HOH B 25 425 367 HOH HOH . 
R 3 HOH B 26 426 152 HOH HOH . 
R 3 HOH B 27 427 143 HOH HOH . 
R 3 HOH B 28 428 208 HOH HOH . 
R 3 HOH B 29 429 209 HOH HOH . 
R 3 HOH B 30 430 151 HOH HOH . 
R 3 HOH B 31 431 216 HOH HOH . 
R 3 HOH B 32 432 90 HOH HOH . 
R 3 HOH B 33 433 135 HOH HOH . 
R 3 HOH B 34 434 147 HOH HOH . 
R 3 HOH B 35 435 291 HOH HOH . 
R 3 HOH B 36 436 293 HOH HOH . 
R 3 HOH B 37 437 294 HOH HOH . 
R 3 HOH B 38 438 296 HOH HOH . 
R 3 HOH B 39 439 259 HOH HOH . 
R 3 HOH B 40 440 338 HOH HOH . 
R 3 HOH B 41 441 212 HOH HOH . 
R 3 HOH B 42 442 64 HOH HOH . 
R 3 HOH B 43 443 319 HOH HOH . 
R 3 HOH B 44 444 339 HOH HOH . 
R 3 HOH B 45 445 281 HOH HOH . 
R 3 HOH B 46 446 377 HOH HOH . 
R 3 HOH B 47 447 255 HOH HOH . 
R 3 HOH B 48 448 207 HOH HOH . 
R 3 HOH B 49 449 375 HOH HOH . 
R 3 HOH B 50 450 16 HOH HOH . 
R 3 HOH B 51 451 206 HOH HOH . 
R 3 HOH B 52 452 381 HOH HOH . 
S 3 HOH C 1 401 303 HOH HOH . 
S 3 HOH C 2 402 221 HOH HOH . 
S 3 HOH C 3 403 305 HOH HOH . 
S 3 HOH C 4 404 352 HOH HOH . 
S 3 HOH C 5 405 82 HOH HOH . 
S 3 HOH C 6 406 21 HOH HOH . 
S 3 HOH C 7 407 12 HOH HOH . 
S 3 HOH C 8 408 265 HOH HOH . 
S 3 HOH C 9 409 171 HOH HOH . 
S 3 HOH C 10 410 99 HOH HOH . 
S 3 HOH C 11 411 27 HOH HOH . 
S 3 HOH C 12 412 26 HOH HOH . 
S 3 HOH C 13 413 349 HOH HOH . 
S 3 HOH C 14 414 141 HOH HOH . 
S 3 HOH C 15 415 30 HOH HOH . 
S 3 HOH C 16 416 274 HOH HOH . 
S 3 HOH C 17 417 174 HOH HOH . 
S 3 HOH C 18 418 299 HOH HOH . 
S 3 HOH C 19 419 178 HOH HOH . 
S 3 HOH C 20 420 346 HOH HOH . 
S 3 HOH C 21 421 308 HOH HOH . 
S 3 HOH C 22 422 122 HOH HOH . 
S 3 HOH C 23 423 176 HOH HOH . 
S 3 HOH C 24 424 177 HOH HOH . 
S 3 HOH C 25 425 36 HOH HOH . 
S 3 HOH C 26 426 267 HOH HOH . 
S 3 HOH C 27 427 101 HOH HOH . 
S 3 HOH C 28 428 298 HOH HOH . 
S 3 HOH C 29 429 345 HOH HOH . 
S 3 HOH C 30 430 217 HOH HOH . 
S 3 HOH C 31 431 214 HOH HOH . 
S 3 HOH C 32 432 393 HOH HOH . 
S 3 HOH C 33 433 343 HOH HOH . 
S 3 HOH C 34 434 347 HOH HOH . 
S 3 HOH C 35 435 94 HOH HOH . 
S 3 HOH C 36 436 80 HOH HOH . 
S 3 HOH C 37 437 172 HOH HOH . 
S 3 HOH C 38 438 396 HOH HOH . 
S 3 HOH C 39 439 169 HOH HOH . 
S 3 HOH C 40 440 225 HOH HOH . 
S 3 HOH C 41 441 395 HOH HOH . 
S 3 HOH C 42 442 170 HOH HOH . 
S 3 HOH C 43 443 350 HOH HOH . 
S 3 HOH C 44 444 302 HOH HOH . 
S 3 HOH C 45 445 401 HOH HOH . 
S 3 HOH C 46 446 300 HOH HOH . 
S 3 HOH C 47 447 361 HOH HOH . 
S 3 HOH C 48 448 168 HOH HOH . 
S 3 HOH C 49 449 322 HOH HOH . 
S 3 HOH C 50 450 365 HOH HOH . 
S 3 HOH C 51 451 268 HOH HOH . 
S 3 HOH C 52 452 388 HOH HOH . 
S 3 HOH C 53 453 399 HOH HOH . 
T 3 HOH D 1 501 132 HOH HOH . 
T 3 HOH D 2 502 234 HOH HOH . 
T 3 HOH D 3 503 228 HOH HOH . 
T 3 HOH D 4 504 354 HOH HOH . 
T 3 HOH D 5 505 65 HOH HOH . 
T 3 HOH D 6 506 324 HOH HOH . 
T 3 HOH D 7 507 105 HOH HOH . 
T 3 HOH D 8 508 179 HOH HOH . 
T 3 HOH D 9 509 189 HOH HOH . 
T 3 HOH D 10 510 57 HOH HOH . 
T 3 HOH D 11 511 7 HOH HOH . 
T 3 HOH D 12 512 73 HOH HOH . 
T 3 HOH D 13 513 187 HOH HOH . 
T 3 HOH D 14 514 41 HOH HOH . 
T 3 HOH D 15 515 35 HOH HOH . 
T 3 HOH D 16 516 409 HOH HOH . 
T 3 HOH D 17 517 54 HOH HOH . 
T 3 HOH D 18 518 272 HOH HOH . 
T 3 HOH D 19 519 318 HOH HOH . 
T 3 HOH D 20 520 182 HOH HOH . 
T 3 HOH D 21 521 39 HOH HOH . 
T 3 HOH D 22 522 138 HOH HOH . 
T 3 HOH D 23 523 273 HOH HOH . 
T 3 HOH D 24 524 66 HOH HOH . 
T 3 HOH D 25 525 312 HOH HOH . 
T 3 HOH D 26 526 232 HOH HOH . 
T 3 HOH D 27 527 276 HOH HOH . 
T 3 HOH D 28 528 98 HOH HOH . 
T 3 HOH D 29 529 34 HOH HOH . 
T 3 HOH D 30 530 233 HOH HOH . 
T 3 HOH D 31 531 236 HOH HOH . 
T 3 HOH D 32 532 184 HOH HOH . 
T 3 HOH D 33 533 239 HOH HOH . 
T 3 HOH D 34 534 231 HOH HOH . 
T 3 HOH D 35 535 357 HOH HOH . 
T 3 HOH D 36 536 47 HOH HOH . 
T 3 HOH D 37 537 323 HOH HOH . 
T 3 HOH D 38 538 183 HOH HOH . 
T 3 HOH D 39 539 408 HOH HOH . 
T 3 HOH D 40 540 192 HOH HOH . 
T 3 HOH D 41 541 181 HOH HOH . 
T 3 HOH D 42 542 270 HOH HOH . 
T 3 HOH D 43 543 356 HOH HOH . 
T 3 HOH D 44 544 49 HOH HOH . 
T 3 HOH D 45 545 229 HOH HOH . 
T 3 HOH D 46 546 61 HOH HOH . 
T 3 HOH D 47 547 315 HOH HOH . 
T 3 HOH D 48 548 226 HOH HOH . 
T 3 HOH D 49 549 227 HOH HOH . 
T 3 HOH D 50 550 271 HOH HOH . 
T 3 HOH D 51 551 71 HOH HOH . 
T 3 HOH D 52 552 251 HOH HOH . 
T 3 HOH D 53 553 139 HOH HOH . 
T 3 HOH D 54 554 102 HOH HOH . 
T 3 HOH D 55 555 193 HOH HOH . 
T 3 HOH D 56 556 309 HOH HOH . 
T 3 HOH D 57 557 79 HOH HOH . 
T 3 HOH D 58 558 403 HOH HOH . 
T 3 HOH D 59 559 402 HOH HOH . 
T 3 HOH D 60 560 400 HOH HOH . 
T 3 HOH D 61 561 397 HOH HOH . 
T 3 HOH D 62 562 186 HOH HOH . 
T 3 HOH D 63 563 362 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 2 -11.303 -10.378 22.441 1 49.79 ? C1 EDO 301 B 1 
HETATM 2 O O1 EDO . . . I 2 -12.053 -9.351 23.09 1 48.45 ? O1 EDO 301 B 1 
HETATM 3 C C2 EDO . . . I 2 -9.866 -9.888 22.312 1 48.29 ? C2 EDO 301 B 1 
HETATM 4 O O2 EDO . . . I 2 -9.105 -10.626 21.359 1 45.82 ? O2 EDO 301 B 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           44 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           559 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#