data_7KOE # _model_server_result.job_id J1j6DpBNVzCsUR3ulbR-5A _model_server_result.datetime_utc '2024-11-21 14:34:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7koe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":601}' # _entry.id 7KOE # _exptl.entry_id 7KOE _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 351.64 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KOE _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KOE _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 M N N ? 7 N N N ? 7 S N N ? 7 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D SG CYS 38 D CYS 476 1_555 N FE3 SF4 . D SF4 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc2 D OD1 ASN 75 D ASN 513 1_555 N FE4 SF4 . D SF4 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc3 H SG CYS 38 H CYS 476 1_555 T FE3 SF4 . H SF4 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc4 H OD1 ASN 75 H ASN 513 1_555 T FE4 SF4 . H SF4 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 492 n n FE1 S3 SF4 sing 493 n n FE1 S4 SF4 sing 494 n n FE2 S1 SF4 sing 495 n n FE2 S3 SF4 sing 496 n n FE2 S4 SF4 sing 497 n n FE3 S1 SF4 sing 498 n n FE3 S2 SF4 sing 499 n n FE3 S4 SF4 sing 500 n n FE4 S1 SF4 sing 501 n n FE4 S2 SF4 sing 502 n n FE4 S3 SF4 sing 503 n n # _atom_sites.entry_id 7KOE _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 FAD A 1 301 301 FAD FAD . J 5 FAD B 1 701 701 FAD FAD . K 5 FAD C 1 501 501 FAD FAD . L 6 MQ7 C 1 502 601 MQ7 MQ7 . M 7 SF4 D 1 601 601 SF4 SF4 . N 7 SF4 D 1 602 701 SF4 SF4 . O 5 FAD E 1 301 301 FAD FAD . P 5 FAD F 1 701 701 FAD FAD . Q 5 FAD G 1 501 501 FAD FAD . R 6 MQ7 G 1 502 601 MQ7 MQ7 . S 7 SF4 H 1 601 601 SF4 SF4 . T 7 SF4 H 1 602 701 SF4 SF4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . M 7 159.304 127.918 171.312 1 11.58 ? FE1 SF4 601 D 1 HETATM 2 FE FE2 SF4 . . . M 7 159.774 130.198 173.236 1 11.58 ? FE2 SF4 601 D 1 HETATM 3 FE FE3 SF4 . . . M 7 158.806 127.53 174.265 1 11.58 ? FE3 SF4 601 D 1 HETATM 4 FE FE4 SF4 . . . M 7 156.959 129.28 172.64 1 11.58 ? FE4 SF4 601 D 1 HETATM 5 S S1 SF4 . . . M 7 158.117 129.545 174.414 1 11.58 ? S1 SF4 601 D 1 HETATM 6 S S2 SF4 . . . M 7 157.648 127.265 172.491 1 11.58 ? S2 SF4 601 D 1 HETATM 7 S S3 SF4 . . . M 7 158.616 129.934 171.462 1 11.58 ? S3 SF4 601 D 1 HETATM 8 S S4 SF4 . . . M 7 160.462 128.182 173.086 1 11.58 ? S4 SF4 601 D 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 8 #