data_7KP5 # _model_server_result.job_id 2GFSvoVzXGlN8RSP5sRLfw _model_server_result.datetime_utc '2024-11-25 18:29:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kp5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7KP5 # _exptl.entry_id 7KP5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 266.397 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECYL SULFATE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KP5 _cell.length_a 35.747 _cell.length_b 69.788 _cell.length_c 140.331 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KP5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (z,x,y)' _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 AA1 CYS 66 1_555 A SG CYS 160 AA1 CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf2 A SG CYS 106 AA1 CYS 106 1_555 A SG CYS 119 AA1 CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 66 BA1 CYS 66 1_555 B SG CYS 160 BA1 CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C12 H26 O4 S' _chem_comp.formula_weight 266.397 _chem_comp.id SDS _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECYL SULFATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1S SDS doub 277 n n S O2S SDS sing 278 n n S O3S SDS sing 279 n n S O4 SDS doub 280 n n O2S C1 SDS sing 281 n n O3S H3S SDS sing 282 n n C1 C12 SDS sing 283 n n C1 H1C1 SDS sing 284 n n C1 H1C2 SDS sing 285 n n C2 C3 SDS sing 286 n n C2 H2C1 SDS sing 287 n n C2 H2C2 SDS sing 288 n n C2 H2C3 SDS sing 289 n n C3 C4 SDS sing 290 n n C3 H3C1 SDS sing 291 n n C3 H3C2 SDS sing 292 n n C4 C5 SDS sing 293 n n C4 H4C1 SDS sing 294 n n C4 H4C2 SDS sing 295 n n C5 C6 SDS sing 296 n n C5 H5C1 SDS sing 297 n n C5 H5C2 SDS sing 298 n n C6 C7 SDS sing 299 n n C6 H6C1 SDS sing 300 n n C6 H6C2 SDS sing 301 n n C7 C8 SDS sing 302 n n C7 H7C1 SDS sing 303 n n C7 H7C2 SDS sing 304 n n C8 C9 SDS sing 305 n n C8 H8C1 SDS sing 306 n n C8 H8C2 SDS sing 307 n n C9 C10 SDS sing 308 n n C9 H9C1 SDS sing 309 n n C9 H9C2 SDS sing 310 n n C10 C11 SDS sing 311 n n C10 H101 SDS sing 312 n n C10 H102 SDS sing 313 n n C11 C12 SDS sing 314 n n C11 H111 SDS sing 315 n n C11 H112 SDS sing 316 n n C12 H121 SDS sing 317 n n C12 H122 SDS sing 318 n n # _atom_sites.entry_id 7KP5 _atom_sites.fract_transf_matrix[1][1] 0.027974 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014329 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007126 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SDS AA1 1 201 1 SDS SDS . D 2 SDS BA1 1 201 2 SDS SDS . E 2 SDS BA1 1 202 3 SDS SDS . F 3 HOH AA1 1 301 30 HOH HOH . F 3 HOH AA1 2 302 12 HOH HOH . F 3 HOH AA1 3 303 1 HOH HOH . F 3 HOH AA1 4 304 18 HOH HOH . F 3 HOH AA1 5 305 2 HOH HOH . F 3 HOH AA1 6 306 16 HOH HOH . F 3 HOH AA1 7 307 3 HOH HOH . F 3 HOH AA1 8 308 35 HOH HOH . F 3 HOH AA1 9 309 7 HOH HOH . F 3 HOH AA1 10 310 8 HOH HOH . F 3 HOH AA1 11 311 22 HOH HOH . F 3 HOH AA1 12 312 4 HOH HOH . F 3 HOH AA1 13 313 5 HOH HOH . F 3 HOH AA1 14 314 25 HOH HOH . F 3 HOH AA1 15 315 34 HOH HOH . F 3 HOH AA1 16 316 19 HOH HOH . F 3 HOH AA1 17 317 23 HOH HOH . F 3 HOH AA1 18 318 21 HOH HOH . F 3 HOH AA1 19 319 29 HOH HOH . F 3 HOH AA1 20 320 32 HOH HOH . F 3 HOH AA1 21 321 28 HOH HOH . F 3 HOH AA1 22 322 27 HOH HOH . F 3 HOH AA1 23 323 33 HOH HOH . G 3 HOH BA1 1 301 13 HOH HOH . G 3 HOH BA1 2 302 17 HOH HOH . G 3 HOH BA1 3 303 15 HOH HOH . G 3 HOH BA1 4 304 6 HOH HOH . G 3 HOH BA1 5 305 26 HOH HOH . G 3 HOH BA1 6 306 31 HOH HOH . G 3 HOH BA1 7 307 20 HOH HOH . G 3 HOH BA1 8 308 14 HOH HOH . G 3 HOH BA1 9 309 11 HOH HOH . G 3 HOH BA1 10 310 10 HOH HOH . G 3 HOH BA1 11 311 9 HOH HOH . G 3 HOH BA1 12 312 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SDS . . . C 2 -18.745 97.302 160.189 1 74.91 ? S SDS 201 AA1 1 HETATM 2 O O1S SDS . . . C 2 -20.089 97.517 159.283 1 66.52 ? O1S SDS 201 AA1 1 HETATM 3 O O2S SDS . . . C 2 -18.477 95.798 160.3 1 60.52 ? O2S SDS 201 AA1 1 HETATM 4 O O3S SDS . . . C 2 -18.947 97.847 161.5 1 84.44 ? O3S SDS 201 AA1 1 HETATM 5 O O4 SDS . . . C 2 -17.641 97.954 159.544 1 68.93 ? O4 SDS 201 AA1 1 HETATM 6 C C1 SDS . . . C 2 -19.215 94.914 159.466 1 60.19 ? C1 SDS 201 AA1 1 HETATM 7 C C2 SDS . . . C 2 -14.495 83.823 153.148 1 51.18 ? C2 SDS 201 AA1 1 HETATM 8 C C3 SDS . . . C 2 -14.379 85.313 153.374 1 50.44 ? C3 SDS 201 AA1 1 HETATM 9 C C4 SDS . . . C 2 -15.565 85.822 154.18 1 41.15 ? C4 SDS 201 AA1 1 HETATM 10 C C5 SDS . . . C 2 -15.391 87.296 154.508 1 43.57 ? C5 SDS 201 AA1 1 HETATM 11 C C6 SDS . . . C 2 -16.549 87.791 155.36 1 39.41 ? C6 SDS 201 AA1 1 HETATM 12 C C7 SDS . . . C 2 -16.315 89.233 155.779 1 41.98 ? C7 SDS 201 AA1 1 HETATM 13 C C8 SDS . . . C 2 -17.485 89.723 156.613 1 44.77 ? C8 SDS 201 AA1 1 HETATM 14 C C9 SDS . . . C 2 -17.427 91.234 156.766 1 45.19 ? C9 SDS 201 AA1 1 HETATM 15 C C10 SDS . . . C 2 -18.054 91.629 158.092 1 50.43 ? C10 SDS 201 AA1 1 HETATM 16 C C11 SDS . . . C 2 -17.942 93.128 158.31 1 50.71 ? C11 SDS 201 AA1 1 HETATM 17 C C12 SDS . . . C 2 -18.653 93.509 159.598 1 51.29 ? C12 SDS 201 AA1 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #