data_7KRT # _model_server_result.job_id ohAsfkSMatoYsq65yAkXGw _model_server_result.datetime_utc '2025-07-03 20:42:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7krt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":701}' # _entry.id 7KRT # _exptl.entry_id 7KRT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.75 _cell.angle_gamma 90 _cell.entry_id 7KRT _cell.length_a 77.469 _cell.length_b 199.529 _cell.length_c 94.231 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KRT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,H,N 2 1 C,I,J,O 3 1 D,K,L,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 47 A CYS 47 1_555 A SG CYS 529 A CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 47 B CYS 47 1_555 B SG CYS 529 B CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 C SG CYS 47 C CYS 47 1_555 C SG CYS 529 C CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 D SG CYS 47 D CYS 47 1_555 D SG CYS 529 D CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 E MG MG . A MG 701 1_555 F O3G ATP . A ATP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc2 E MG MG . A MG 701 1_555 F O1B ATP . A ATP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc3 E MG MG . A MG 701 1_555 M O HOH . A HOH 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc4 E MG MG . A MG 701 1_555 M O HOH . A HOH 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc5 E MG MG . A MG 701 1_555 M O HOH . A HOH 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc6 E MG MG . A MG 701 1_555 M O HOH . A HOH 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc7 G MG MG . B MG 701 1_555 H O1B ATP . B ATP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc8 G MG MG . B MG 701 1_555 H O3G ATP . B ATP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc9 G MG MG . B MG 701 1_555 N O HOH . B HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc10 G MG MG . B MG 701 1_555 N O HOH . B HOH 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc11 G MG MG . B MG 701 1_555 N O HOH . B HOH 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc12 G MG MG . B MG 701 1_555 N O HOH . B HOH 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc13 I MG MG . C MG 701 1_555 J O1B ATP . C ATP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc14 I MG MG . C MG 701 1_555 J O3G ATP . C ATP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? metalc ? metalc15 I MG MG . C MG 701 1_555 O O HOH . C HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc16 I MG MG . C MG 701 1_555 O O HOH . C HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc17 I MG MG . C MG 701 1_555 O O HOH . C HOH 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc18 I MG MG . C MG 701 1_555 O O HOH . C HOH 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc19 K MG MG . D MG 701 1_555 L O3G ATP . D ATP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc20 K MG MG . D MG 701 1_555 L O1B ATP . D ATP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc21 K MG MG . D MG 701 1_555 P O HOH . D HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc22 K MG MG . D MG 701 1_555 P O HOH . D HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc23 K MG MG . D MG 701 1_555 P O HOH . D HOH 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc24 K MG MG . D MG 701 1_555 P O HOH . D HOH 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7KRT _atom_sites.fract_transf_matrix[1][1] 0.012908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000845 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005012 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010635 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 701 601 MG MG . F 3 ATP A 1 702 602 ATP ATP . G 2 MG B 1 701 601 MG MG . H 3 ATP B 1 702 602 ATP ATP . I 2 MG C 1 701 601 MG MG . J 3 ATP C 1 702 602 ATP ATP . K 2 MG D 1 701 601 MG MG . L 3 ATP D 1 702 602 ATP ATP . M 4 HOH A 1 801 609 HOH HOH . M 4 HOH A 2 802 611 HOH HOH . M 4 HOH A 3 803 606 HOH HOH . M 4 HOH A 4 804 604 HOH HOH . M 4 HOH A 5 805 607 HOH HOH . M 4 HOH A 6 806 608 HOH HOH . M 4 HOH A 7 807 605 HOH HOH . M 4 HOH A 8 808 603 HOH HOH . M 4 HOH A 9 809 613 HOH HOH . M 4 HOH A 10 810 614 HOH HOH . M 4 HOH A 11 811 610 HOH HOH . M 4 HOH A 12 812 612 HOH HOH . N 4 HOH B 1 801 604 HOH HOH . N 4 HOH B 2 802 609 HOH HOH . N 4 HOH B 3 803 603 HOH HOH . N 4 HOH B 4 804 607 HOH HOH . N 4 HOH B 5 805 606 HOH HOH . N 4 HOH B 6 806 605 HOH HOH . N 4 HOH B 7 807 610 HOH HOH . N 4 HOH B 8 808 608 HOH HOH . N 4 HOH B 9 809 611 HOH HOH . O 4 HOH C 1 801 604 HOH HOH . O 4 HOH C 2 802 605 HOH HOH . O 4 HOH C 3 803 603 HOH HOH . O 4 HOH C 4 804 609 HOH HOH . O 4 HOH C 5 805 607 HOH HOH . O 4 HOH C 6 806 606 HOH HOH . O 4 HOH C 7 807 608 HOH HOH . O 4 HOH C 8 808 610 HOH HOH . O 4 HOH C 9 809 612 HOH HOH . O 4 HOH C 10 810 611 HOH HOH . P 4 HOH D 1 801 609 HOH HOH . P 4 HOH D 2 802 610 HOH HOH . P 4 HOH D 3 803 608 HOH HOH . P 4 HOH D 4 804 607 HOH HOH . P 4 HOH D 5 805 604 HOH HOH . P 4 HOH D 6 806 603 HOH HOH . P 4 HOH D 7 807 606 HOH HOH . P 4 HOH D 8 808 605 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -25.667 _atom_site.Cartn_y 24.297 _atom_site.Cartn_z -46.522 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 701 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 135 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #