data_7KU5 # _model_server_result.job_id q72eXnTakpCXRwiLnP6lyg _model_server_result.datetime_utc '2025-03-31 05:45:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ku5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7KU5 # _exptl.entry_id 7KU5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 893.489 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'CHLOROPHYLL A' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KU5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C55 H72 Mg N4 O5' _chem_comp.formula_weight 893.489 _chem_comp.id CLA _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLOROPHYLL A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag MG NA CLA sing 167 n n MG NB CLA sing 168 n n MG NC CLA sing 169 n n MG ND CLA sing 170 n n CHA C1A CLA sing 171 n n CHA C4D CLA doub 172 n n CHA CBD CLA sing 173 n n CHB C4A CLA doub 174 n n CHB C1B CLA sing 175 n n CHB HHB CLA sing 176 n n CHC C4B CLA sing 177 n n CHC C1C CLA doub 178 n n CHC HHC CLA sing 179 n n CHD C4C CLA sing 180 n n CHD C1D CLA doub 181 n n CHD HHD CLA sing 182 n n NA C1A CLA doub 183 n n NA C4A CLA sing 184 n n C1A C2A CLA sing 185 n n C2A C3A CLA sing 186 n n C2A CAA CLA sing 187 n n C2A H2A CLA sing 188 n n C3A C4A CLA sing 189 n n C3A CMA CLA sing 190 n n C3A H3A CLA sing 191 n n CMA HMA1 CLA sing 192 n n CMA HMA2 CLA sing 193 n n CMA HMA3 CLA sing 194 n n CAA CBA CLA sing 195 n n CAA HAA1 CLA sing 196 n n CAA HAA2 CLA sing 197 n n CBA CGA CLA sing 198 n n CBA HBA1 CLA sing 199 n n CBA HBA2 CLA sing 200 n n CGA O1A CLA doub 201 n n CGA O2A CLA sing 202 n n O2A C1 CLA sing 203 n n NB C1B CLA sing 204 n y NB C4B CLA sing 205 n y C1B C2B CLA doub 206 n y C2B C3B CLA sing 207 n y C2B CMB CLA sing 208 n n C3B C4B CLA doub 209 n y C3B CAB CLA sing 210 n n CMB HMB1 CLA sing 211 n n CMB HMB2 CLA sing 212 n n CMB HMB3 CLA sing 213 n n CAB CBB CLA doub 214 n n CAB HAB CLA sing 215 n n CBB HBB1 CLA sing 216 n n CBB HBB2 CLA sing 217 n n NC C1C CLA sing 218 n n NC C4C CLA doub 219 n n C1C C2C CLA sing 220 n n C2C C3C CLA doub 221 n n C2C CMC CLA sing 222 n n C3C C4C CLA sing 223 n n C3C CAC CLA sing 224 n n CMC HMC1 CLA sing 225 n n CMC HMC2 CLA sing 226 n n CMC HMC3 CLA sing 227 n n CAC CBC CLA sing 228 n n CAC HAC1 CLA sing 229 n n CAC HAC2 CLA sing 230 n n CBC HBC1 CLA sing 231 n n CBC HBC2 CLA sing 232 n n CBC HBC3 CLA sing 233 n n ND C1D CLA sing 234 n n ND C4D CLA sing 235 n n C1D C2D CLA sing 236 n n C2D C3D CLA doub 237 n n C2D CMD CLA sing 238 n n C3D C4D CLA sing 239 n n C3D CAD CLA sing 240 n n CMD HMD1 CLA sing 241 n n CMD HMD2 CLA sing 242 n n CMD HMD3 CLA sing 243 n n CAD OBD CLA doub 244 n n CAD CBD CLA sing 245 n n CBD CGD CLA sing 246 n n CBD HBD CLA sing 247 n n CGD O1D CLA doub 248 n n CGD O2D CLA sing 249 n n O2D CED CLA sing 250 n n CED HED1 CLA sing 251 n n CED HED2 CLA sing 252 n n CED HED3 CLA sing 253 n n C1 C2 CLA sing 254 n n C1 H11 CLA sing 255 n n C1 H12 CLA sing 256 n n C2 C3 CLA doub 257 e n C2 H2 CLA sing 258 n n C3 C4 CLA sing 259 n n C3 C5 CLA sing 260 n n C4 H41 CLA sing 261 n n C4 H42 CLA sing 262 n n C4 H43 CLA sing 263 n n C5 C6 CLA sing 264 n n C5 H51 CLA sing 265 n n C5 H52 CLA sing 266 n n C6 C7 CLA sing 267 n n C6 H61 CLA sing 268 n n C6 H62 CLA sing 269 n n C7 C8 CLA sing 270 n n C7 H71 CLA sing 271 n n C7 H72 CLA sing 272 n n C8 C9 CLA sing 273 n n C8 C10 CLA sing 274 n n C8 H8 CLA sing 275 n n C9 H91 CLA sing 276 n n C9 H92 CLA sing 277 n n C9 H93 CLA sing 278 n n C10 C11 CLA sing 279 n n C10 H101 CLA sing 280 n n C10 H102 CLA sing 281 n n C11 C12 CLA sing 282 n n C11 H111 CLA sing 283 n n C11 H112 CLA sing 284 n n C12 C13 CLA sing 285 n n C12 H121 CLA sing 286 n n C12 H122 CLA sing 287 n n C13 C14 CLA sing 288 n n C13 C15 CLA sing 289 n n C13 H13 CLA sing 290 n n C14 H141 CLA sing 291 n n C14 H142 CLA sing 292 n n C14 H143 CLA sing 293 n n C15 C16 CLA sing 294 n n C15 H151 CLA sing 295 n n C15 H152 CLA sing 296 n n C16 C17 CLA sing 297 n n C16 H161 CLA sing 298 n n C16 H162 CLA sing 299 n n C17 C18 CLA sing 300 n n C17 H171 CLA sing 301 n n C17 H172 CLA sing 302 n n C18 C19 CLA sing 303 n n C18 C20 CLA sing 304 n n C18 H18 CLA sing 305 n n C19 H191 CLA sing 306 n n C19 H192 CLA sing 307 n n C19 H193 CLA sing 308 n n C20 H201 CLA sing 309 n n C20 H202 CLA sing 310 n n C20 H203 CLA sing 311 n n # _atom_sites.entry_id 7KU5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CLA O 1 201 201 CLA CLA . C 2 CLA O 1 202 202 CLA CLA . D 2 CLA O 1 203 203 CLA CLA . E 3 BCR O 1 301 301 BCR BCR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 MG MG CLA . . . D 2 148.358 90.924 124.92 1 74.06 ? MG CLA 203 O 1 HETATM 2 C CHA CLA . . . D 2 148.464 88.274 127.152 1 74.06 ? CHA CLA 203 O 1 HETATM 3 C CHB CLA . . . D 2 145.278 91.78 126.098 1 74.06 ? CHB CLA 203 O 1 HETATM 4 C CHC CLA . . . D 2 148.279 93.507 122.652 1 74.06 ? CHC CLA 203 O 1 HETATM 5 C CHD CLA . . . D 2 151.535 89.953 123.694 1 74.06 ? CHD CLA 203 O 1 HETATM 6 N NA CLA . . . D 2 147.094 90.131 126.383 1 74.06 ? NA CLA 203 O 1 HETATM 7 C C1A CLA . . . D 2 147.334 89.037 127.223 1 74.06 ? C1A CLA 203 O 1 HETATM 8 C C2A CLA . . . D 2 146.213 88.867 128.243 1 74.06 ? C2A CLA 203 O 1 HETATM 9 C C3A CLA . . . D 2 145.175 89.935 127.823 1 74.06 ? C3A CLA 203 O 1 HETATM 10 C C4A CLA . . . D 2 145.878 90.683 126.688 1 74.06 ? C4A CLA 203 O 1 HETATM 11 N NB CLA . . . D 2 147.032 92.366 124.461 1 74.06 ? NB CLA 203 O 1 HETATM 12 C C1B CLA . . . D 2 145.827 92.554 125.058 1 74.06 ? C1B CLA 203 O 1 HETATM 13 C C2B CLA . . . D 2 145.147 93.737 124.455 1 74.06 ? C2B CLA 203 O 1 HETATM 14 C C3B CLA . . . D 2 145.987 94.227 123.481 1 74.06 ? C3B CLA 203 O 1 HETATM 15 C C4B CLA . . . D 2 147.201 93.363 123.472 1 74.06 ? C4B CLA 203 O 1 HETATM 16 N NC CLA . . . D 2 149.671 91.595 123.441 1 74.06 ? NC CLA 203 O 1 HETATM 17 C C1C CLA . . . D 2 149.439 92.677 122.633 1 74.06 ? C1C CLA 203 O 1 HETATM 18 C C2C CLA . . . D 2 150.56 92.865 121.719 1 74.06 ? C2C CLA 203 O 1 HETATM 19 C C3C CLA . . . D 2 151.488 91.866 122.015 1 74.06 ? C3C CLA 203 O 1 HETATM 20 C C4C CLA . . . D 2 150.923 91.074 123.104 1 74.06 ? C4C CLA 203 O 1 HETATM 21 N ND CLA . . . D 2 149.721 89.474 125.277 1 74.06 ? ND CLA 203 O 1 HETATM 22 C C1D CLA . . . D 2 150.992 89.193 124.71 1 74.06 ? C1D CLA 203 O 1 HETATM 23 C C2D CLA . . . D 2 151.565 88.002 125.38 1 74.06 ? C2D CLA 203 O 1 HETATM 24 C C3D CLA . . . D 2 150.636 87.608 126.327 1 74.06 ? C3D CLA 203 O 1 HETATM 25 C C4D CLA . . . D 2 149.509 88.555 126.217 1 74.06 ? C4D CLA 203 O 1 HETATM 26 C CAD CLA . . . D 2 150.308 86.66 127.377 1 74.06 ? CAD CLA 203 O 1 HETATM 27 C CBD CLA . . . D 2 148.904 87.058 127.934 1 74.06 ? CBD CLA 203 O 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #