data_7KU6 # _model_server_result.job_id lQUMf4xw1cmhZYQiK_uk4g _model_server_result.datetime_utc '2024-10-19 16:42:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ku6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":301}' # _entry.id 7KU6 # _exptl.entry_id 7KU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KU6 _cell.length_a 85.75 _cell.length_b 234.42 _cell.length_c 202.89 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,G,H,I,J,K,L,M,N,O,P,T,U 1 1 E,F,Q,R,S,V 2 1 E,F,Q,R,S,V 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 85.75 0 101.445 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 J N N ? 3 M N N ? 3 N N N ? 3 Q N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 177 A VAL 165 1_555 A N KPI 178 A KPI 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C KPI 178 A KPI 166 1_555 A N GLU 179 A GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 B C VAL 177 B VAL 165 1_555 B N KPI 178 B KPI 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C KPI 178 B KPI 166 1_555 B N GLU 179 B GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 C C VAL 177 C VAL 165 1_555 C N KPI 178 C KPI 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 C C KPI 178 C KPI 166 1_555 C N GLU 179 C GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 D C VAL 177 D VAL 165 1_555 D N KPI 178 D KPI 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 D C KPI 178 D KPI 166 1_555 D N GLU 179 D GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OD2 ASP 239 A ASP 227 1_555 K MG MG . B MG 302 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc2 B OD2 ASP 239 B ASP 227 1_555 L MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc3 D OD1 ASP 52 D ASP 40 1_555 S MG MG . F MG 302 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 276 n n C1 C2 PGE sing 277 n n C1 H1 PGE sing 278 n n C1 H12 PGE sing 279 n n O1 HO1 PGE sing 280 n n C2 O2 PGE sing 281 n n C2 H2 PGE sing 282 n n C2 H22 PGE sing 283 n n O2 C3 PGE sing 284 n n C3 C4 PGE sing 285 n n C3 H3 PGE sing 286 n n C3 H32 PGE sing 287 n n C4 O3 PGE sing 288 n n C4 H4 PGE sing 289 n n C4 H42 PGE sing 290 n n O4 C6 PGE sing 291 n n O4 HO4 PGE sing 292 n n C6 C5 PGE sing 293 n n C6 H6 PGE sing 294 n n C6 H62 PGE sing 295 n n C5 O3 PGE sing 296 n n C5 H5 PGE sing 297 n n C5 H52 PGE sing 298 n n # _atom_sites.entry_id 7KU6 _atom_sites.fract_transf_matrix[1][1] 0.011662 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004266 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004929 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 PGE A 1 301 2 PGE PGE . H 4 MG A 1 302 5 MG MG . I 5 EDO A 1 303 1 EDO EDO . J 3 PGE B 1 301 3 PGE PGE . K 4 MG B 1 302 1 MG MG . L 4 MG B 1 303 2 MG MG . M 3 PGE C 1 301 4 PGE PGE . N 3 PGE D 1 301 5 PGE PGE . O 4 MG D 1 302 4 MG MG . P 5 EDO D 1 303 2 EDO EDO . Q 3 PGE E 1 301 1 PGE PGE . R 3 PGE F 1 301 6 PGE PGE . S 4 MG F 1 302 3 MG MG . T 6 HOH A 1 401 1 HOH HOH . U 6 HOH D 1 401 2 HOH HOH . V 6 HOH E 1 401 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . J 3 -22.92 27.29 -2.441 1 45.76 ? C1 PGE 301 B 1 HETATM 2 O O1 PGE . . . J 3 -21.735 28.008 -2.124 1 45.85 ? O1 PGE 301 B 1 HETATM 3 C C2 PGE . . . J 3 -23.833 27.228 -1.233 1 45.59 ? C2 PGE 301 B 1 HETATM 4 O O2 PGE . . . J 3 -25.152 27.534 -1.64 1 45.94 ? O2 PGE 301 B 1 HETATM 5 C C3 PGE . . . J 3 -25.95 26.396 -1.892 1 44.56 ? C3 PGE 301 B 1 HETATM 6 C C4 PGE . . . J 3 -27.211 26.828 -2.612 1 43.07 ? C4 PGE 301 B 1 HETATM 7 O O4 PGE . . . J 3 -27.107 25.923 -6.68 1 37.15 ? O4 PGE 301 B 1 HETATM 8 C C6 PGE . . . J 3 -27.579 27.165 -6.179 1 38.49 ? C6 PGE 301 B 1 HETATM 9 C C5 PGE . . . J 3 -28.138 26.95 -4.786 1 40.54 ? C5 PGE 301 B 1 HETATM 10 O O3 PGE . . . J 3 -27.124 26.414 -3.96 1 42.18 ? O3 PGE 301 B 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #