data_7KUQ # _model_server_result.job_id q35hF6o88FXXCrfW6eZ3mw _model_server_result.datetime_utc '2024-11-23 14:31:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kuq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":708}' # _entry.id 7KUQ # _exptl.entry_id 7KUQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7KUQ _cell.length_a 80.509 _cell.length_b 80.509 _cell.length_c 249.38 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KUQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 545 A CYS 543 1_555 A SG CYS 545 A CYS 543 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc1 A O ASP 174 A ASP 172 1_555 D K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc2 A OD2 ASP 174 A ASP 172 1_555 D K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc3 A OD1 ASP 176 A ASP 174 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc4 A OD2 ASP 176 A ASP 174 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc5 A O ASP 176 A ASP 174 1_555 D K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc6 A ND1 HIS 178 A HIS 176 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc7 A O HIS 178 A HIS 176 1_555 D K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc8 A O PHE 187 A PHE 185 1_555 E K K . A K 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc9 A O ASP 190 A ASP 188 1_555 E K K . A K 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc10 A O VAL 193 A VAL 191 1_555 E K K . A K 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc11 A OG SER 197 A SER 195 1_555 D K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc12 A O TRP 198 A TRP 196 1_555 D K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc13 A OD2 ASP 269 A ASP 267 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc14 B O Q9C . A Q9C 701 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc15 C ZN ZN . A ZN 702 1_555 J O HOH . A HOH 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc16 E K K . A K 704 1_555 J O HOH . A HOH 873 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc17 E K K . A K 704 1_555 J O HOH . A HOH 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc18 I NA NA . A NA 708 1_555 J O HOH . A HOH 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? metalc ? metalc19 I NA NA . A NA 708 1_555 J O HOH . A HOH 833 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc20 I NA NA . A NA 708 1_555 J O HOH . A HOH 871 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc21 I NA NA . A NA 708 1_555 J O HOH . A HOH 965 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc22 I NA NA . A NA 708 1_555 J O HOH . A HOH 976 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7KUQ _atom_sites.fract_transf_matrix[1][1] 0.012421 _atom_sites.fract_transf_matrix[1][2] 0.007171 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014343 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00401 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q9C A 1 701 701 Q9C LIG . C 3 ZN A 1 702 1 ZN ZN . D 4 K A 1 703 1 K K . E 4 K A 1 704 2 K K . F 5 PO4 A 1 705 1 PO4 PO4 . G 5 PO4 A 1 706 2 PO4 PO4 . H 5 PO4 A 1 707 3 PO4 PO4 . I 6 NA A 1 708 1 NA NA . J 7 HOH A 1 801 37 HOH HOH . J 7 HOH A 2 802 40 HOH HOH . J 7 HOH A 3 803 60 HOH HOH . J 7 HOH A 4 804 124 HOH HOH . J 7 HOH A 5 805 133 HOH HOH . J 7 HOH A 6 806 84 HOH HOH . J 7 HOH A 7 807 136 HOH HOH . J 7 HOH A 8 808 114 HOH HOH . J 7 HOH A 9 809 96 HOH HOH . J 7 HOH A 10 810 58 HOH HOH . J 7 HOH A 11 811 172 HOH HOH . J 7 HOH A 12 812 116 HOH HOH . J 7 HOH A 13 813 141 HOH HOH . J 7 HOH A 14 814 178 HOH HOH . J 7 HOH A 15 815 18 HOH HOH . J 7 HOH A 16 816 78 HOH HOH . J 7 HOH A 17 817 80 HOH HOH . J 7 HOH A 18 818 155 HOH HOH . J 7 HOH A 19 819 154 HOH HOH . J 7 HOH A 20 820 170 HOH HOH . J 7 HOH A 21 821 9 HOH HOH . J 7 HOH A 22 822 153 HOH HOH . J 7 HOH A 23 823 64 HOH HOH . J 7 HOH A 24 824 115 HOH HOH . J 7 HOH A 25 825 137 HOH HOH . J 7 HOH A 26 826 134 HOH HOH . J 7 HOH A 27 827 38 HOH HOH . J 7 HOH A 28 828 67 HOH HOH . J 7 HOH A 29 829 46 HOH HOH . J 7 HOH A 30 830 31 HOH HOH . J 7 HOH A 31 831 10 HOH HOH . J 7 HOH A 32 832 53 HOH HOH . J 7 HOH A 33 833 164 HOH HOH . J 7 HOH A 34 834 39 HOH HOH . J 7 HOH A 35 835 5 HOH HOH . J 7 HOH A 36 836 120 HOH HOH . J 7 HOH A 37 837 76 HOH HOH . J 7 HOH A 38 838 42 HOH HOH . J 7 HOH A 39 839 74 HOH HOH . J 7 HOH A 40 840 132 HOH HOH . J 7 HOH A 41 841 8 HOH HOH . J 7 HOH A 42 842 79 HOH HOH . J 7 HOH A 43 843 17 HOH HOH . J 7 HOH A 44 844 86 HOH HOH . J 7 HOH A 45 845 147 HOH HOH . J 7 HOH A 46 846 43 HOH HOH . J 7 HOH A 47 847 55 HOH HOH . J 7 HOH A 48 848 98 HOH HOH . J 7 HOH A 49 849 57 HOH HOH . J 7 HOH A 50 850 14 HOH HOH . J 7 HOH A 51 851 11 HOH HOH . J 7 HOH A 52 852 145 HOH HOH . J 7 HOH A 53 853 139 HOH HOH . J 7 HOH A 54 854 182 HOH HOH . J 7 HOH A 55 855 4 HOH HOH . J 7 HOH A 56 856 176 HOH HOH . J 7 HOH A 57 857 44 HOH HOH . J 7 HOH A 58 858 72 HOH HOH . J 7 HOH A 59 859 48 HOH HOH . J 7 HOH A 60 860 138 HOH HOH . J 7 HOH A 61 861 121 HOH HOH . J 7 HOH A 62 862 12 HOH HOH . J 7 HOH A 63 863 157 HOH HOH . J 7 HOH A 64 864 22 HOH HOH . J 7 HOH A 65 865 102 HOH HOH . J 7 HOH A 66 866 81 HOH HOH . J 7 HOH A 67 867 166 HOH HOH . J 7 HOH A 68 868 63 HOH HOH . J 7 HOH A 69 869 34 HOH HOH . J 7 HOH A 70 870 92 HOH HOH . J 7 HOH A 71 871 49 HOH HOH . J 7 HOH A 72 872 185 HOH HOH . J 7 HOH A 73 873 7 HOH HOH . J 7 HOH A 74 874 168 HOH HOH . J 7 HOH A 75 875 26 HOH HOH . J 7 HOH A 76 876 90 HOH HOH . J 7 HOH A 77 877 173 HOH HOH . J 7 HOH A 78 878 130 HOH HOH . J 7 HOH A 79 879 70 HOH HOH . J 7 HOH A 80 880 107 HOH HOH . J 7 HOH A 81 881 52 HOH HOH . J 7 HOH A 82 882 33 HOH HOH . J 7 HOH A 83 883 144 HOH HOH . J 7 HOH A 84 884 110 HOH HOH . J 7 HOH A 85 885 19 HOH HOH . J 7 HOH A 86 886 23 HOH HOH . J 7 HOH A 87 887 32 HOH HOH . J 7 HOH A 88 888 127 HOH HOH . J 7 HOH A 89 889 146 HOH HOH . J 7 HOH A 90 890 118 HOH HOH . J 7 HOH A 91 891 28 HOH HOH . J 7 HOH A 92 892 91 HOH HOH . J 7 HOH A 93 893 36 HOH HOH . J 7 HOH A 94 894 21 HOH HOH . J 7 HOH A 95 895 167 HOH HOH . J 7 HOH A 96 896 29 HOH HOH . J 7 HOH A 97 897 41 HOH HOH . J 7 HOH A 98 898 56 HOH HOH . J 7 HOH A 99 899 3 HOH HOH . J 7 HOH A 100 900 16 HOH HOH . J 7 HOH A 101 901 94 HOH HOH . J 7 HOH A 102 902 117 HOH HOH . J 7 HOH A 103 903 35 HOH HOH . J 7 HOH A 104 904 140 HOH HOH . J 7 HOH A 105 905 128 HOH HOH . J 7 HOH A 106 906 181 HOH HOH . J 7 HOH A 107 907 2 HOH HOH . J 7 HOH A 108 908 25 HOH HOH . J 7 HOH A 109 909 47 HOH HOH . J 7 HOH A 110 910 6 HOH HOH . J 7 HOH A 111 911 82 HOH HOH . J 7 HOH A 112 912 105 HOH HOH . J 7 HOH A 113 913 142 HOH HOH . J 7 HOH A 114 914 93 HOH HOH . J 7 HOH A 115 915 119 HOH HOH . J 7 HOH A 116 916 85 HOH HOH . J 7 HOH A 117 917 15 HOH HOH . J 7 HOH A 118 918 87 HOH HOH . J 7 HOH A 119 919 123 HOH HOH . J 7 HOH A 120 920 95 HOH HOH . J 7 HOH A 121 921 88 HOH HOH . J 7 HOH A 122 922 69 HOH HOH . J 7 HOH A 123 923 71 HOH HOH . J 7 HOH A 124 924 106 HOH HOH . J 7 HOH A 125 925 150 HOH HOH . J 7 HOH A 126 926 1 HOH HOH . J 7 HOH A 127 927 179 HOH HOH . J 7 HOH A 128 928 30 HOH HOH . J 7 HOH A 129 929 151 HOH HOH . J 7 HOH A 130 930 131 HOH HOH . J 7 HOH A 131 931 113 HOH HOH . J 7 HOH A 132 932 61 HOH HOH . J 7 HOH A 133 933 24 HOH HOH . J 7 HOH A 134 934 97 HOH HOH . J 7 HOH A 135 935 89 HOH HOH . J 7 HOH A 136 936 62 HOH HOH . J 7 HOH A 137 937 13 HOH HOH . J 7 HOH A 138 938 112 HOH HOH . J 7 HOH A 139 939 20 HOH HOH . J 7 HOH A 140 940 111 HOH HOH . J 7 HOH A 141 941 99 HOH HOH . J 7 HOH A 142 942 175 HOH HOH . J 7 HOH A 143 943 100 HOH HOH . J 7 HOH A 144 944 77 HOH HOH . J 7 HOH A 145 945 73 HOH HOH . J 7 HOH A 146 946 66 HOH HOH . J 7 HOH A 147 947 45 HOH HOH . J 7 HOH A 148 948 143 HOH HOH . J 7 HOH A 149 949 68 HOH HOH . J 7 HOH A 150 950 109 HOH HOH . J 7 HOH A 151 951 183 HOH HOH . J 7 HOH A 152 952 148 HOH HOH . J 7 HOH A 153 953 50 HOH HOH . J 7 HOH A 154 954 51 HOH HOH . J 7 HOH A 155 955 75 HOH HOH . J 7 HOH A 156 956 54 HOH HOH . J 7 HOH A 157 957 27 HOH HOH . J 7 HOH A 158 958 104 HOH HOH . J 7 HOH A 159 959 122 HOH HOH . J 7 HOH A 160 960 129 HOH HOH . J 7 HOH A 161 961 126 HOH HOH . J 7 HOH A 162 962 161 HOH HOH . J 7 HOH A 163 963 101 HOH HOH . J 7 HOH A 164 964 160 HOH HOH . J 7 HOH A 165 965 171 HOH HOH . J 7 HOH A 166 966 108 HOH HOH . J 7 HOH A 167 967 103 HOH HOH . J 7 HOH A 168 968 169 HOH HOH . J 7 HOH A 169 969 177 HOH HOH . J 7 HOH A 170 970 149 HOH HOH . J 7 HOH A 171 971 162 HOH HOH . J 7 HOH A 172 972 65 HOH HOH . J 7 HOH A 173 973 163 HOH HOH . J 7 HOH A 174 974 184 HOH HOH . J 7 HOH A 175 975 180 HOH HOH . J 7 HOH A 176 976 165 HOH HOH . J 7 HOH A 177 977 135 HOH HOH . J 7 HOH A 178 978 59 HOH HOH . J 7 HOH A 179 979 152 HOH HOH . J 7 HOH A 180 980 174 HOH HOH . J 7 HOH A 181 981 159 HOH HOH . J 7 HOH A 182 982 156 HOH HOH . J 7 HOH A 183 983 158 HOH HOH . J 7 HOH A 184 984 125 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 6 _atom_site.Cartn_x 30.483 _atom_site.Cartn_y 44.748 _atom_site.Cartn_z 43.487 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 708 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #