data_7KVL
#
_model_server_result.job_id            WjEhTUbYwN85NEIjriduCA 
_model_server_result.datetime_utc      '2024-11-06 00:20:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7kvl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":511}' 
#
_entry.id    7KVL 
#
_exptl.entry_id    7KVL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7KVL 
_cell.length_a            67.659 
_cell.length_b            101.94 
_cell.length_c            101.95 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7KVL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 U N N 
? 4 V N N 
? 4 W N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7KVL 
_atom_sites.fract_transf_matrix[1][1]    0.01478 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00981 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009809 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PEG A 1 501 501 PEG PEG . 
D 2 PEG A 1 502 601 PEG PEG . 
E 3 X4P A 1 503 801 X4P UNL . 
F 2 PEG A 1 504 901 PEG PEG . 
G 2 PEG A 1 505 1001 PEG PEG . 
H 2 PEG A 1 506 1101 PEG PEG . 
I 2 PEG A 1 507 1201 PEG PEG . 
J 2 PEG A 1 508 1301 PEG PEG . 
K 4 DMS A 1 509 401 DMS DMS . 
L 4 DMS A 1 510 3 DMS DMS . 
M 4 DMS A 1 511 4 DMS DMS . 
N 4 DMS A 1 512 5 DMS DMS . 
O 4 DMS A 1 513 6 DMS DMS . 
P 2 PEG B 1 701 701 PEG PEG . 
Q 5 SER B 1 702 301 SER SER . 
R 2 PEG B 1 703 501 PEG PEG . 
S 2 PEG B 1 704 601 PEG PEG . 
T 2 PEG B 1 705 701 PEG PEG . 
U 4 DMS B 1 706 2 DMS DMS . 
V 4 DMS B 1 707 7 DMS DMS . 
W 4 DMS B 1 708 8 DMS DMS . 
X 6 HOH A 1 601 222 HOH HOH . 
X 6 HOH A 2 602 201 HOH HOH . 
X 6 HOH A 3 603 144 HOH HOH . 
X 6 HOH A 4 604 102 HOH HOH . 
X 6 HOH A 5 605 44 HOH HOH . 
X 6 HOH A 6 606 148 HOH HOH . 
X 6 HOH A 7 607 21 HOH HOH . 
X 6 HOH A 8 608 127 HOH HOH . 
X 6 HOH A 9 609 91 HOH HOH . 
X 6 HOH A 10 610 78 HOH HOH . 
X 6 HOH A 11 611 30 HOH HOH . 
X 6 HOH A 12 612 58 HOH HOH . 
X 6 HOH A 13 613 23 HOH HOH . 
X 6 HOH A 14 614 67 HOH HOH . 
X 6 HOH A 15 615 65 HOH HOH . 
X 6 HOH A 16 616 35 HOH HOH . 
X 6 HOH A 17 617 183 HOH HOH . 
X 6 HOH A 18 618 79 HOH HOH . 
X 6 HOH A 19 619 132 HOH HOH . 
X 6 HOH A 20 620 155 HOH HOH . 
X 6 HOH A 21 621 3 HOH HOH . 
X 6 HOH A 22 622 207 HOH HOH . 
X 6 HOH A 23 623 159 HOH HOH . 
X 6 HOH A 24 624 11 HOH HOH . 
X 6 HOH A 25 625 154 HOH HOH . 
X 6 HOH A 26 626 94 HOH HOH . 
X 6 HOH A 27 627 216 HOH HOH . 
X 6 HOH A 28 628 34 HOH HOH . 
X 6 HOH A 29 629 122 HOH HOH . 
X 6 HOH A 30 630 24 HOH HOH . 
X 6 HOH A 31 631 28 HOH HOH . 
X 6 HOH A 32 632 49 HOH HOH . 
X 6 HOH A 33 633 6 HOH HOH . 
X 6 HOH A 34 634 55 HOH HOH . 
X 6 HOH A 35 635 213 HOH HOH . 
X 6 HOH A 36 636 174 HOH HOH . 
X 6 HOH A 37 637 18 HOH HOH . 
X 6 HOH A 38 638 86 HOH HOH . 
X 6 HOH A 39 639 125 HOH HOH . 
X 6 HOH A 40 640 68 HOH HOH . 
X 6 HOH A 41 641 69 HOH HOH . 
X 6 HOH A 42 642 112 HOH HOH . 
X 6 HOH A 43 643 32 HOH HOH . 
X 6 HOH A 44 644 57 HOH HOH . 
X 6 HOH A 45 645 16 HOH HOH . 
X 6 HOH A 46 646 64 HOH HOH . 
X 6 HOH A 47 647 194 HOH HOH . 
X 6 HOH A 48 648 4 HOH HOH . 
X 6 HOH A 49 649 190 HOH HOH . 
X 6 HOH A 50 650 63 HOH HOH . 
X 6 HOH A 51 651 66 HOH HOH . 
X 6 HOH A 52 652 38 HOH HOH . 
X 6 HOH A 53 653 105 HOH HOH . 
X 6 HOH A 54 654 19 HOH HOH . 
X 6 HOH A 55 655 140 HOH HOH . 
X 6 HOH A 56 656 1 HOH HOH . 
X 6 HOH A 57 657 2 HOH HOH . 
X 6 HOH A 58 658 217 HOH HOH . 
X 6 HOH A 59 659 53 HOH HOH . 
X 6 HOH A 60 660 149 HOH HOH . 
X 6 HOH A 61 661 135 HOH HOH . 
X 6 HOH A 62 662 157 HOH HOH . 
X 6 HOH A 63 663 82 HOH HOH . 
X 6 HOH A 64 664 54 HOH HOH . 
X 6 HOH A 65 665 171 HOH HOH . 
X 6 HOH A 66 666 29 HOH HOH . 
X 6 HOH A 67 667 117 HOH HOH . 
X 6 HOH A 68 668 103 HOH HOH . 
X 6 HOH A 69 669 101 HOH HOH . 
X 6 HOH A 70 670 116 HOH HOH . 
X 6 HOH A 71 671 92 HOH HOH . 
X 6 HOH A 72 672 56 HOH HOH . 
X 6 HOH A 73 673 74 HOH HOH . 
X 6 HOH A 74 674 206 HOH HOH . 
X 6 HOH A 75 675 88 HOH HOH . 
X 6 HOH A 76 676 39 HOH HOH . 
X 6 HOH A 77 677 179 HOH HOH . 
X 6 HOH A 78 678 22 HOH HOH . 
X 6 HOH A 79 679 215 HOH HOH . 
X 6 HOH A 80 680 20 HOH HOH . 
X 6 HOH A 81 681 191 HOH HOH . 
X 6 HOH A 82 682 126 HOH HOH . 
X 6 HOH A 83 683 45 HOH HOH . 
X 6 HOH A 84 684 167 HOH HOH . 
X 6 HOH A 85 685 153 HOH HOH . 
X 6 HOH A 86 686 166 HOH HOH . 
X 6 HOH A 87 687 84 HOH HOH . 
X 6 HOH A 88 688 165 HOH HOH . 
X 6 HOH A 89 689 115 HOH HOH . 
X 6 HOH A 90 690 109 HOH HOH . 
X 6 HOH A 91 691 193 HOH HOH . 
X 6 HOH A 92 692 40 HOH HOH . 
X 6 HOH A 93 693 142 HOH HOH . 
X 6 HOH A 94 694 41 HOH HOH . 
X 6 HOH A 95 695 48 HOH HOH . 
X 6 HOH A 96 696 182 HOH HOH . 
X 6 HOH A 97 697 145 HOH HOH . 
X 6 HOH A 98 698 210 HOH HOH . 
X 6 HOH A 99 699 133 HOH HOH . 
X 6 HOH A 100 700 89 HOH HOH . 
X 6 HOH A 101 701 147 HOH HOH . 
X 6 HOH A 102 702 202 HOH HOH . 
X 6 HOH A 103 703 214 HOH HOH . 
X 6 HOH A 104 704 208 HOH HOH . 
X 6 HOH A 105 705 70 HOH HOH . 
X 6 HOH A 106 706 121 HOH HOH . 
X 6 HOH A 107 707 146 HOH HOH . 
X 6 HOH A 108 708 196 HOH HOH . 
X 6 HOH A 109 709 203 HOH HOH . 
X 6 HOH A 110 710 178 HOH HOH . 
X 6 HOH A 111 711 129 HOH HOH . 
X 6 HOH A 112 712 223 HOH HOH . 
X 6 HOH A 113 713 225 HOH HOH . 
X 6 HOH A 114 714 219 HOH HOH . 
X 6 HOH A 115 715 138 HOH HOH . 
X 6 HOH A 116 716 189 HOH HOH . 
X 6 HOH A 117 717 113 HOH HOH . 
X 6 HOH A 118 718 111 HOH HOH . 
X 6 HOH A 119 719 169 HOH HOH . 
X 6 HOH A 120 720 226 HOH HOH . 
X 6 HOH A 121 721 168 HOH HOH . 
X 6 HOH A 122 722 170 HOH HOH . 
X 6 HOH A 123 723 123 HOH HOH . 
X 6 HOH A 124 724 195 HOH HOH . 
X 6 HOH A 125 725 124 HOH HOH . 
X 6 HOH A 126 726 209 HOH HOH . 
X 6 HOH A 127 727 90 HOH HOH . 
X 6 HOH A 128 728 158 HOH HOH . 
Y 6 HOH B 1 801 227 HOH HOH . 
Y 6 HOH B 2 802 163 HOH HOH . 
Y 6 HOH B 3 803 87 HOH HOH . 
Y 6 HOH B 4 804 83 HOH HOH . 
Y 6 HOH B 5 805 150 HOH HOH . 
Y 6 HOH B 6 806 85 HOH HOH . 
Y 6 HOH B 7 807 104 HOH HOH . 
Y 6 HOH B 8 808 59 HOH HOH . 
Y 6 HOH B 9 809 139 HOH HOH . 
Y 6 HOH B 10 810 36 HOH HOH . 
Y 6 HOH B 11 811 51 HOH HOH . 
Y 6 HOH B 12 812 152 HOH HOH . 
Y 6 HOH B 13 813 128 HOH HOH . 
Y 6 HOH B 14 814 25 HOH HOH . 
Y 6 HOH B 15 815 186 HOH HOH . 
Y 6 HOH B 16 816 77 HOH HOH . 
Y 6 HOH B 17 817 176 HOH HOH . 
Y 6 HOH B 18 818 220 HOH HOH . 
Y 6 HOH B 19 819 131 HOH HOH . 
Y 6 HOH B 20 820 177 HOH HOH . 
Y 6 HOH B 21 821 184 HOH HOH . 
Y 6 HOH B 22 822 107 HOH HOH . 
Y 6 HOH B 23 823 26 HOH HOH . 
Y 6 HOH B 24 824 42 HOH HOH . 
Y 6 HOH B 25 825 9 HOH HOH . 
Y 6 HOH B 26 826 96 HOH HOH . 
Y 6 HOH B 27 827 60 HOH HOH . 
Y 6 HOH B 28 828 7 HOH HOH . 
Y 6 HOH B 29 829 17 HOH HOH . 
Y 6 HOH B 30 830 81 HOH HOH . 
Y 6 HOH B 31 831 93 HOH HOH . 
Y 6 HOH B 32 832 187 HOH HOH . 
Y 6 HOH B 33 833 188 HOH HOH . 
Y 6 HOH B 34 834 71 HOH HOH . 
Y 6 HOH B 35 835 13 HOH HOH . 
Y 6 HOH B 36 836 31 HOH HOH . 
Y 6 HOH B 37 837 14 HOH HOH . 
Y 6 HOH B 38 838 114 HOH HOH . 
Y 6 HOH B 39 839 76 HOH HOH . 
Y 6 HOH B 40 840 15 HOH HOH . 
Y 6 HOH B 41 841 37 HOH HOH . 
Y 6 HOH B 42 842 5 HOH HOH . 
Y 6 HOH B 43 843 98 HOH HOH . 
Y 6 HOH B 44 844 75 HOH HOH . 
Y 6 HOH B 45 845 72 HOH HOH . 
Y 6 HOH B 46 846 175 HOH HOH . 
Y 6 HOH B 47 847 134 HOH HOH . 
Y 6 HOH B 48 848 52 HOH HOH . 
Y 6 HOH B 49 849 108 HOH HOH . 
Y 6 HOH B 50 850 62 HOH HOH . 
Y 6 HOH B 51 851 141 HOH HOH . 
Y 6 HOH B 52 852 10 HOH HOH . 
Y 6 HOH B 53 853 12 HOH HOH . 
Y 6 HOH B 54 854 162 HOH HOH . 
Y 6 HOH B 55 855 181 HOH HOH . 
Y 6 HOH B 56 856 80 HOH HOH . 
Y 6 HOH B 57 857 43 HOH HOH . 
Y 6 HOH B 58 858 27 HOH HOH . 
Y 6 HOH B 59 859 73 HOH HOH . 
Y 6 HOH B 60 860 47 HOH HOH . 
Y 6 HOH B 61 861 143 HOH HOH . 
Y 6 HOH B 62 862 33 HOH HOH . 
Y 6 HOH B 63 863 156 HOH HOH . 
Y 6 HOH B 64 864 100 HOH HOH . 
Y 6 HOH B 65 865 50 HOH HOH . 
Y 6 HOH B 66 866 192 HOH HOH . 
Y 6 HOH B 67 867 46 HOH HOH . 
Y 6 HOH B 68 868 180 HOH HOH . 
Y 6 HOH B 69 869 205 HOH HOH . 
Y 6 HOH B 70 870 200 HOH HOH . 
Y 6 HOH B 71 871 99 HOH HOH . 
Y 6 HOH B 72 872 173 HOH HOH . 
Y 6 HOH B 73 873 110 HOH HOH . 
Y 6 HOH B 74 874 106 HOH HOH . 
Y 6 HOH B 75 875 161 HOH HOH . 
Y 6 HOH B 76 876 198 HOH HOH . 
Y 6 HOH B 77 877 137 HOH HOH . 
Y 6 HOH B 78 878 228 HOH HOH . 
Y 6 HOH B 79 879 185 HOH HOH . 
Y 6 HOH B 80 880 151 HOH HOH . 
Y 6 HOH B 81 881 97 HOH HOH . 
Y 6 HOH B 82 882 160 HOH HOH . 
Y 6 HOH B 83 883 164 HOH HOH . 
Y 6 HOH B 84 884 218 HOH HOH . 
Y 6 HOH B 85 885 118 HOH HOH . 
Y 6 HOH B 86 886 204 HOH HOH . 
Y 6 HOH B 87 887 211 HOH HOH . 
Y 6 HOH B 88 888 95 HOH HOH . 
Y 6 HOH B 89 889 221 HOH HOH . 
Y 6 HOH B 90 890 120 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . M 4 -24.061 -3.309 9.778 1 115.71 ? S DMS 511 A 1 
HETATM 2 O O DMS . . . M 4 -23.61 -4.706 10.071 1 66.7 ? O DMS 511 A 1 
HETATM 3 C C1 DMS . . . M 4 -23.771 -2.889 8.036 1 76.62 ? C1 DMS 511 A 1 
HETATM 4 C C2 DMS . . . M 4 -25.87 -3.246 9.804 1 60.17 ? C2 DMS 511 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#