data_7KVR # _model_server_result.job_id OZXCH6MfZsFwqF7sofiOHw _model_server_result.datetime_utc '2024-11-05 23:57:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kvr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":701}' # _entry.id 7KVR # _exptl.entry_id 7KVR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KVR _cell.length_a 67.6 _cell.length_b 101.474 _cell.length_c 102.227 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KVR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 J N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 246 n n C1 C2 PEG sing 247 n n C1 H11 PEG sing 248 n n C1 H12 PEG sing 249 n n O1 HO1 PEG sing 250 n n C2 O2 PEG sing 251 n n C2 H21 PEG sing 252 n n C2 H22 PEG sing 253 n n O2 C3 PEG sing 254 n n C3 C4 PEG sing 255 n n C3 H31 PEG sing 256 n n C3 H32 PEG sing 257 n n C4 O4 PEG sing 258 n n C4 H41 PEG sing 259 n n C4 H42 PEG sing 260 n n O4 HO4 PEG sing 261 n n # _atom_sites.entry_id 7KVR _atom_sites.fract_transf_matrix[1][1] 0.014793 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009855 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 401 401 DMS DMS . D 3 PEG A 1 402 501 PEG PEG . E 3 PEG A 1 403 601 PEG PEG . F 3 PEG A 1 404 801 PEG PEG . G 3 PEG A 1 405 1001 PEG PEG . H 2 DMS A 1 406 5 DMS DMS . I 2 DMS A 1 407 6 DMS DMS . J 3 PEG B 1 701 701 PEG PEG . K 2 DMS B 1 702 401 DMS DMS . L 4 X4V B 1 703 601 X4V UNL . M 2 DMS B 1 704 2 DMS DMS . N 2 DMS B 1 705 8 DMS DMS . O 5 HOH A 1 501 95 HOH HOH . O 5 HOH A 2 502 19 HOH HOH . O 5 HOH A 3 503 79 HOH HOH . O 5 HOH A 4 504 81 HOH HOH . O 5 HOH A 5 505 45 HOH HOH . O 5 HOH A 6 506 67 HOH HOH . O 5 HOH A 7 507 112 HOH HOH . O 5 HOH A 8 508 23 HOH HOH . O 5 HOH A 9 509 74 HOH HOH . O 5 HOH A 10 510 75 HOH HOH . O 5 HOH A 11 511 3 HOH HOH . O 5 HOH A 12 512 22 HOH HOH . O 5 HOH A 13 513 110 HOH HOH . O 5 HOH A 14 514 25 HOH HOH . O 5 HOH A 15 515 14 HOH HOH . O 5 HOH A 16 516 16 HOH HOH . O 5 HOH A 17 517 2 HOH HOH . O 5 HOH A 18 518 1 HOH HOH . O 5 HOH A 19 519 24 HOH HOH . O 5 HOH A 20 520 53 HOH HOH . O 5 HOH A 21 521 70 HOH HOH . O 5 HOH A 22 522 18 HOH HOH . O 5 HOH A 23 523 51 HOH HOH . O 5 HOH A 24 524 50 HOH HOH . O 5 HOH A 25 525 10 HOH HOH . O 5 HOH A 26 526 31 HOH HOH . O 5 HOH A 27 527 6 HOH HOH . O 5 HOH A 28 528 4 HOH HOH . O 5 HOH A 29 529 91 HOH HOH . O 5 HOH A 30 530 17 HOH HOH . O 5 HOH A 31 531 21 HOH HOH . O 5 HOH A 32 532 83 HOH HOH . O 5 HOH A 33 533 33 HOH HOH . O 5 HOH A 34 534 73 HOH HOH . O 5 HOH A 35 535 64 HOH HOH . O 5 HOH A 36 536 87 HOH HOH . O 5 HOH A 37 537 27 HOH HOH . O 5 HOH A 38 538 28 HOH HOH . O 5 HOH A 39 539 44 HOH HOH . O 5 HOH A 40 540 72 HOH HOH . O 5 HOH A 41 541 32 HOH HOH . O 5 HOH A 42 542 114 HOH HOH . O 5 HOH A 43 543 35 HOH HOH . O 5 HOH A 44 544 57 HOH HOH . O 5 HOH A 45 545 68 HOH HOH . O 5 HOH A 46 546 98 HOH HOH . O 5 HOH A 47 547 107 HOH HOH . O 5 HOH A 48 548 104 HOH HOH . O 5 HOH A 49 549 43 HOH HOH . O 5 HOH A 50 550 48 HOH HOH . O 5 HOH A 51 551 93 HOH HOH . O 5 HOH A 52 552 115 HOH HOH . O 5 HOH A 53 553 46 HOH HOH . O 5 HOH A 54 554 62 HOH HOH . O 5 HOH A 55 555 94 HOH HOH . O 5 HOH A 56 556 92 HOH HOH . O 5 HOH A 57 557 59 HOH HOH . O 5 HOH A 58 558 47 HOH HOH . O 5 HOH A 59 559 86 HOH HOH . O 5 HOH A 60 560 96 HOH HOH . P 5 HOH B 1 801 101 HOH HOH . P 5 HOH B 2 802 108 HOH HOH . P 5 HOH B 3 803 71 HOH HOH . P 5 HOH B 4 804 106 HOH HOH . P 5 HOH B 5 805 102 HOH HOH . P 5 HOH B 6 806 20 HOH HOH . P 5 HOH B 7 807 5 HOH HOH . P 5 HOH B 8 808 78 HOH HOH . P 5 HOH B 9 809 54 HOH HOH . P 5 HOH B 10 810 11 HOH HOH . P 5 HOH B 11 811 30 HOH HOH . P 5 HOH B 12 812 42 HOH HOH . P 5 HOH B 13 813 8 HOH HOH . P 5 HOH B 14 814 82 HOH HOH . P 5 HOH B 15 815 12 HOH HOH . P 5 HOH B 16 816 7 HOH HOH . P 5 HOH B 17 817 15 HOH HOH . P 5 HOH B 18 818 65 HOH HOH . P 5 HOH B 19 819 40 HOH HOH . P 5 HOH B 20 820 9 HOH HOH . P 5 HOH B 21 821 103 HOH HOH . P 5 HOH B 22 822 13 HOH HOH . P 5 HOH B 23 823 99 HOH HOH . P 5 HOH B 24 824 117 HOH HOH . P 5 HOH B 25 825 29 HOH HOH . P 5 HOH B 26 826 34 HOH HOH . P 5 HOH B 27 827 97 HOH HOH . P 5 HOH B 28 828 80 HOH HOH . P 5 HOH B 29 829 37 HOH HOH . P 5 HOH B 30 830 55 HOH HOH . P 5 HOH B 31 831 26 HOH HOH . P 5 HOH B 32 832 90 HOH HOH . P 5 HOH B 33 833 52 HOH HOH . P 5 HOH B 34 834 69 HOH HOH . P 5 HOH B 35 835 116 HOH HOH . P 5 HOH B 36 836 63 HOH HOH . P 5 HOH B 37 837 36 HOH HOH . P 5 HOH B 38 838 41 HOH HOH . P 5 HOH B 39 839 60 HOH HOH . P 5 HOH B 40 840 61 HOH HOH . P 5 HOH B 41 841 39 HOH HOH . P 5 HOH B 42 842 85 HOH HOH . P 5 HOH B 43 843 58 HOH HOH . P 5 HOH B 44 844 76 HOH HOH . P 5 HOH B 45 845 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . J 3 0.357 1.96 28.827 1 85.34 ? C1 PEG 701 B 1 HETATM 2 O O1 PEG . . . J 3 0.654 1.445 30.095 1 75.52 ? O1 PEG 701 B 1 HETATM 3 C C2 PEG . . . J 3 -0.124 0.86 27.883 1 70.85 ? C2 PEG 701 B 1 HETATM 4 O O2 PEG . . . J 3 -0.621 1.467 26.717 1 79.38 ? O2 PEG 701 B 1 HETATM 5 C C3 PEG . . . J 3 -0.296 0.805 25.525 1 71.04 ? C3 PEG 701 B 1 HETATM 6 C C4 PEG . . . J 3 1.207 0.875 25.251 1 82.07 ? C4 PEG 701 B 1 HETATM 7 O O4 PEG . . . J 3 1.813 -0.396 25.288 1 79.21 ? O4 PEG 701 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #