data_7KVS # _model_server_result.job_id kfRaBYgYcOLgkl1p-nfW6A _model_server_result.datetime_utc '2024-11-25 20:25:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kvs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 7KVS # _exptl.entry_id 7KVS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 124.37 _cell.angle_gamma 90 _cell.entry_id 7KVS _cell.length_a 154.51 _cell.length_b 98.22 _cell.length_c 93.48 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KVS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 C FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc2 C FE HEM . A HEM 601 1_555 G N30 X74 . A X74 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc3 B SG CYS 422 B CYS 442 1_555 J FE HEM . B HEM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc4 J FE HEM . B HEM 602 1_555 K N30 X74 . B X74 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 394 n n S O2 SO4 doub 395 n n S O3 SO4 sing 396 n n S O4 SO4 sing 397 n n # _atom_sites.entry_id 7KVS _atom_sites.fract_transf_matrix[1][1] 0.006472 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004427 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010181 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 601 500 HEM HEM . D 3 SO4 A 1 602 600 SO4 SO4 . E 4 GOL A 1 603 601 GOL GOL . F 5 EDO A 1 604 650 EDO EDO . G 6 X74 A 1 605 700 X74 145 . H 5 EDO A 1 606 650 EDO EDO . I 4 GOL B 1 601 602 GOL GOL . J 2 HEM B 1 602 500 HEM HEM . K 6 X74 B 1 603 700 X74 145 . L 7 HOH A 1 701 35 HOH HOH . L 7 HOH A 2 702 31 HOH HOH . L 7 HOH A 3 703 27 HOH HOH . L 7 HOH A 4 704 3 HOH HOH . L 7 HOH A 5 705 42 HOH HOH . L 7 HOH A 6 706 2 HOH HOH . L 7 HOH A 7 707 13 HOH HOH . L 7 HOH A 8 708 38 HOH HOH . L 7 HOH A 9 709 14 HOH HOH . L 7 HOH A 10 710 8 HOH HOH . L 7 HOH A 11 711 44 HOH HOH . L 7 HOH A 12 712 41 HOH HOH . L 7 HOH A 13 713 49 HOH HOH . L 7 HOH A 14 714 11 HOH HOH . L 7 HOH A 15 715 15 HOH HOH . L 7 HOH A 16 716 28 HOH HOH . L 7 HOH A 17 717 34 HOH HOH . L 7 HOH A 18 718 5 HOH HOH . L 7 HOH A 19 719 47 HOH HOH . L 7 HOH A 20 720 48 HOH HOH . L 7 HOH A 21 721 37 HOH HOH . L 7 HOH A 22 722 29 HOH HOH . L 7 HOH A 23 723 46 HOH HOH . L 7 HOH A 24 724 33 HOH HOH . L 7 HOH A 25 725 39 HOH HOH . L 7 HOH A 26 726 9 HOH HOH . L 7 HOH A 27 727 32 HOH HOH . L 7 HOH A 28 728 6 HOH HOH . L 7 HOH A 29 729 1 HOH HOH . L 7 HOH A 30 730 12 HOH HOH . L 7 HOH A 31 731 10 HOH HOH . L 7 HOH A 32 732 45 HOH HOH . L 7 HOH A 33 733 30 HOH HOH . L 7 HOH A 34 734 43 HOH HOH . L 7 HOH A 35 735 7 HOH HOH . L 7 HOH A 36 736 24 HOH HOH . L 7 HOH A 37 737 26 HOH HOH . L 7 HOH A 38 738 36 HOH HOH . M 7 HOH B 1 701 23 HOH HOH . M 7 HOH B 2 702 50 HOH HOH . M 7 HOH B 3 703 20 HOH HOH . M 7 HOH B 4 704 18 HOH HOH . M 7 HOH B 5 705 22 HOH HOH . M 7 HOH B 6 706 16 HOH HOH . M 7 HOH B 7 707 51 HOH HOH . M 7 HOH B 8 708 17 HOH HOH . M 7 HOH B 9 709 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 -12.61 -31.303 73.944 0.76 120.89 ? S SO4 602 A 1 HETATM 2 O O1 SO4 . . . D 3 -12.193 -31.63 72.584 0.76 134.88 ? O1 SO4 602 A 1 HETATM 3 O O2 SO4 . . . D 3 -13.228 -29.981 73.962 0.76 124.51 ? O2 SO4 602 A 1 HETATM 4 O O3 SO4 . . . D 3 -11.449 -31.315 74.829 0.76 117 ? O3 SO4 602 A 1 HETATM 5 O O4 SO4 . . . D 3 -13.574 -32.294 74.407 0.76 116.96 ? O4 SO4 602 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #