data_7KWF # _model_server_result.job_id kkVDF4Lq4Km1b2gh1cHRvw _model_server_result.datetime_utc '2024-10-10 06:25:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kwf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":302}' # _entry.id 7KWF # _exptl.entry_id 7KWF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KWF _cell.length_a 85.26 _cell.length_b 226.72 _cell.length_c 201.53 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KWF _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,I,J 1 1,2 B,D,E,F,G,H,K,L,M,N,O 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -100.765 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 M N N ? 6 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 177 A VAL 165 1_555 A N KPI 178 A KPI 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C KPI 178 A KPI 166 1_555 A N GLU 179 A GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 B C VAL 177 B VAL 165 1_555 B N KPI 178 B KPI 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C KPI 178 B KPI 166 1_555 B N GLU 179 B GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 F C VAL 177 F VAL 165 1_555 F N KPI 178 F KPI 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 F C KPI 178 F KPI 166 1_555 F N GLU 179 F GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 338 n n C1 C2 PGE sing 339 n n C1 H1 PGE sing 340 n n C1 H12 PGE sing 341 n n O1 HO1 PGE sing 342 n n C2 O2 PGE sing 343 n n C2 H2 PGE sing 344 n n C2 H22 PGE sing 345 n n O2 C3 PGE sing 346 n n C3 C4 PGE sing 347 n n C3 H3 PGE sing 348 n n C3 H32 PGE sing 349 n n C4 O3 PGE sing 350 n n C4 H4 PGE sing 351 n n C4 H42 PGE sing 352 n n O4 C6 PGE sing 353 n n O4 HO4 PGE sing 354 n n C6 C5 PGE sing 355 n n C6 H6 PGE sing 356 n n C6 H62 PGE sing 357 n n C5 O3 PGE sing 358 n n C5 H5 PGE sing 359 n n C5 H52 PGE sing 360 n n # _atom_sites.entry_id 7KWF _atom_sites.fract_transf_matrix[1][1] 0.011729 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004411 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 3VN B 1 301 3 3VN 3VN . H 4 ACT B 1 302 1 ACT ACT . I 3 3VN C 1 301 1 3VN 3VN . J 5 PEG C 1 302 1 PEG PEG . K 5 PEG D 1 301 2 PEG PEG . L 3 3VN E 1 301 2 3VN 3VN . M 6 PGE E 1 302 1 PGE PGE . N 4 ACT F 1 301 3 ACT ACT . O 6 PGE F 1 302 2 PGE PGE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . M 6 -45.511 7.58 3.372 1 20 ? C1 PGE 302 E 1 HETATM 2 O O1 PGE . . . M 6 -44.524 6.691 2.835 1 20 ? O1 PGE 302 E 1 HETATM 3 C C2 PGE . . . M 6 -44.894 8.931 3.683 1 20 ? C2 PGE 302 E 1 HETATM 4 O O2 PGE . . . M 6 -43.607 8.892 3.099 1 20 ? O2 PGE 302 E 1 HETATM 5 C C3 PGE . . . M 6 -42.743 9.912 3.532 1 20 ? C3 PGE 302 E 1 HETATM 6 C C4 PGE . . . M 6 -41.414 9.818 2.826 1 20 ? C4 PGE 302 E 1 HETATM 7 O O4 PGE . . . M 6 -39.386 6.946 -0.164 1 20 ? O4 PGE 302 E 1 HETATM 8 C C6 PGE . . . M 6 -40.145 7.298 0.985 1 20 ? C6 PGE 302 E 1 HETATM 9 C C5 PGE . . . M 6 -40.25 8.799 1.118 1 20 ? C5 PGE 302 E 1 HETATM 10 O O3 PGE . . . M 6 -41.503 9.034 1.682 1 20 ? O3 PGE 302 E 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #