data_7KYE # _model_server_result.job_id kHAHQTXxFPkS6l3-vlCa3g _model_server_result.datetime_utc '2024-11-05 06:56:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7kye # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7KYE # _exptl.entry_id 7KYE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7KYE _cell.length_a 43.208 _cell.length_b 44.075 _cell.length_c 97.313 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KYE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 169 n n C1 C2 EDO sing 170 n n C1 H11 EDO sing 171 n n C1 H12 EDO sing 172 n n O1 HO1 EDO sing 173 n n C2 O2 EDO sing 174 n n C2 H21 EDO sing 175 n n C2 H22 EDO sing 176 n n O2 HO2 EDO sing 177 n n # _atom_sites.entry_id 7KYE _atom_sites.fract_transf_matrix[1][1] 0.023144 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010276 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 201 1 COA COA . C 3 NHE A 1 202 1 NHE NHE . D 4 EDO A 1 203 1 EDO EDO . E 4 EDO A 1 204 2 EDO EDO . F 5 HOH A 1 301 160 HOH HOH . F 5 HOH A 2 302 250 HOH HOH . F 5 HOH A 3 303 131 HOH HOH . F 5 HOH A 4 304 90 HOH HOH . F 5 HOH A 5 305 212 HOH HOH . F 5 HOH A 6 306 31 HOH HOH . F 5 HOH A 7 307 18 HOH HOH . F 5 HOH A 8 308 117 HOH HOH . F 5 HOH A 9 309 35 HOH HOH . F 5 HOH A 10 310 243 HOH HOH . F 5 HOH A 11 311 33 HOH HOH . F 5 HOH A 12 312 32 HOH HOH . F 5 HOH A 13 313 9 HOH HOH . F 5 HOH A 14 314 215 HOH HOH . F 5 HOH A 15 315 42 HOH HOH . F 5 HOH A 16 316 13 HOH HOH . F 5 HOH A 17 317 8 HOH HOH . F 5 HOH A 18 318 203 HOH HOH . F 5 HOH A 19 319 1 HOH HOH . F 5 HOH A 20 320 248 HOH HOH . F 5 HOH A 21 321 62 HOH HOH . F 5 HOH A 22 322 107 HOH HOH . F 5 HOH A 23 323 11 HOH HOH . F 5 HOH A 24 324 238 HOH HOH . F 5 HOH A 25 325 5 HOH HOH . F 5 HOH A 26 326 10 HOH HOH . F 5 HOH A 27 327 232 HOH HOH . F 5 HOH A 28 328 39 HOH HOH . F 5 HOH A 29 329 197 HOH HOH . F 5 HOH A 30 330 51 HOH HOH . F 5 HOH A 31 331 241 HOH HOH . F 5 HOH A 32 332 231 HOH HOH . F 5 HOH A 33 333 253 HOH HOH . F 5 HOH A 34 334 3 HOH HOH . F 5 HOH A 35 335 108 HOH HOH . F 5 HOH A 36 336 129 HOH HOH . F 5 HOH A 37 337 195 HOH HOH . F 5 HOH A 38 338 14 HOH HOH . F 5 HOH A 39 339 17 HOH HOH . F 5 HOH A 40 340 159 HOH HOH . F 5 HOH A 41 341 25 HOH HOH . F 5 HOH A 42 342 211 HOH HOH . F 5 HOH A 43 343 19 HOH HOH . F 5 HOH A 44 344 200 HOH HOH . F 5 HOH A 45 345 249 HOH HOH . F 5 HOH A 46 346 234 HOH HOH . F 5 HOH A 47 347 247 HOH HOH . F 5 HOH A 48 348 176 HOH HOH . F 5 HOH A 49 349 22 HOH HOH . F 5 HOH A 50 350 175 HOH HOH . F 5 HOH A 51 351 225 HOH HOH . F 5 HOH A 52 352 6 HOH HOH . F 5 HOH A 53 353 28 HOH HOH . F 5 HOH A 54 354 20 HOH HOH . F 5 HOH A 55 355 239 HOH HOH . F 5 HOH A 56 356 236 HOH HOH . F 5 HOH A 57 357 245 HOH HOH . F 5 HOH A 58 358 24 HOH HOH . F 5 HOH A 59 359 182 HOH HOH . F 5 HOH A 60 360 140 HOH HOH . F 5 HOH A 61 361 120 HOH HOH . F 5 HOH A 62 362 46 HOH HOH . F 5 HOH A 63 363 112 HOH HOH . F 5 HOH A 64 364 2 HOH HOH . F 5 HOH A 65 365 139 HOH HOH . F 5 HOH A 66 366 52 HOH HOH . F 5 HOH A 67 367 41 HOH HOH . F 5 HOH A 68 368 237 HOH HOH . F 5 HOH A 69 369 251 HOH HOH . F 5 HOH A 70 370 26 HOH HOH . F 5 HOH A 71 371 235 HOH HOH . F 5 HOH A 72 372 240 HOH HOH . F 5 HOH A 73 373 194 HOH HOH . F 5 HOH A 74 374 205 HOH HOH . F 5 HOH A 75 375 252 HOH HOH . F 5 HOH A 76 376 201 HOH HOH . F 5 HOH A 77 377 209 HOH HOH . F 5 HOH A 78 378 71 HOH HOH . F 5 HOH A 79 379 213 HOH HOH . F 5 HOH A 80 380 202 HOH HOH . F 5 HOH A 81 381 233 HOH HOH . F 5 HOH A 82 382 92 HOH HOH . F 5 HOH A 83 383 207 HOH HOH . F 5 HOH A 84 384 101 HOH HOH . F 5 HOH A 85 385 190 HOH HOH . F 5 HOH A 86 386 40 HOH HOH . F 5 HOH A 87 387 244 HOH HOH . F 5 HOH A 88 388 242 HOH HOH . F 5 HOH A 89 389 192 HOH HOH . F 5 HOH A 90 390 54 HOH HOH . F 5 HOH A 91 391 147 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 24.304 15.492 12.896 1 71.67 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . D 4 25.045 14.968 11.812 1 79.87 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . D 4 23.501 16.685 12.529 1 72.94 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . D 4 22.861 16.575 11.269 1 69.57 ? O2 EDO 203 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #