data_7L10 # _model_server_result.job_id IlHUHGQ5Vdf7S8ryuJD2CA _model_server_result.datetime_utc '2024-11-21 10:24:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l10 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 7L10 # _exptl.entry_id 7L10 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 418.275 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2-[3-(3,5-dichlorophenyl)-2-oxo[2H-[1,3'-bipyridine]]-5-yl]benzonitrile" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.64 _cell.angle_gamma 90 _cell.entry_id 7L10 _cell.length_a 97.22 _cell.length_b 80.869 _cell.length_c 54.51 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L10 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H13 Cl2 N3 O' _chem_comp.formula_weight 418.275 _chem_comp.id XEY _chem_comp.mon_nstd_flag . _chem_comp.name "2-[3-(3,5-dichlorophenyl)-2-oxo[2H-[1,3'-bipyridine]]-5-yl]benzonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 N2 XEY doub 376 n y C16 C15 XEY sing 377 n y N2 C17 XEY sing 378 n y C15 C14 XEY doub 379 n y C17 C12 XEY doub 380 n y C14 C12 XEY sing 381 n y N3 C23 XEY trip 382 n n C12 N1 XEY sing 383 n n C23 C18 XEY sing 384 n n N1 C9 XEY sing 385 n n N1 C8 XEY sing 386 n n C9 C10 XEY doub 387 n n C18 C19 XEY doub 388 n y C18 C13 XEY sing 389 n y C19 C20 XEY sing 390 n y O1 C8 XEY doub 391 n n C8 C5 XEY sing 392 n n C10 C13 XEY sing 393 n n C10 C11 XEY sing 394 n n C13 C22 XEY doub 395 n y C20 C21 XEY doub 396 n y C5 C11 XEY doub 397 n n C5 C4 XEY sing 398 n n C22 C21 XEY sing 399 n y C4 C6 XEY doub 400 n y C4 C2 XEY sing 401 n y C6 C7 XEY sing 402 n y C2 C1 XEY doub 403 n y C7 CL2 XEY sing 404 n n C7 C3 XEY doub 405 n y C1 C3 XEY sing 406 n y C1 CL1 XEY sing 407 n n C2 H1 XEY sing 408 n n C6 H2 XEY sing 409 n n C11 H3 XEY sing 410 n n C14 H4 XEY sing 411 n n C15 H5 XEY sing 412 n n C16 H6 XEY sing 413 n n C17 H7 XEY sing 414 n n C19 H8 XEY sing 415 n n C20 H9 XEY sing 416 n n C21 H10 XEY sing 417 n n C22 H11 XEY sing 418 n n C3 H12 XEY sing 419 n n C9 H13 XEY sing 420 n n # _atom_sites.entry_id 7L10 _atom_sites.fract_transf_matrix[1][1] 0.010286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005159 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012366 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020524 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 XEY A 1 400 400 XEY MP9 . C 3 HOH A 1 501 863 HOH HOH . C 3 HOH A 2 502 807 HOH HOH . C 3 HOH A 3 503 915 HOH HOH . C 3 HOH A 4 504 911 HOH HOH . C 3 HOH A 5 505 608 HOH HOH . C 3 HOH A 6 506 920 HOH HOH . C 3 HOH A 7 507 898 HOH HOH . C 3 HOH A 8 508 839 HOH HOH . C 3 HOH A 9 509 808 HOH HOH . C 3 HOH A 10 510 909 HOH HOH . C 3 HOH A 11 511 912 HOH HOH . C 3 HOH A 12 512 671 HOH HOH . C 3 HOH A 13 513 822 HOH HOH . C 3 HOH A 14 514 876 HOH HOH . C 3 HOH A 15 515 905 HOH HOH . C 3 HOH A 16 516 907 HOH HOH . C 3 HOH A 17 517 829 HOH HOH . C 3 HOH A 18 518 851 HOH HOH . C 3 HOH A 19 519 664 HOH HOH . C 3 HOH A 20 520 627 HOH HOH . C 3 HOH A 21 521 631 HOH HOH . C 3 HOH A 22 522 634 HOH HOH . C 3 HOH A 23 523 844 HOH HOH . C 3 HOH A 24 524 826 HOH HOH . C 3 HOH A 25 525 613 HOH HOH . C 3 HOH A 26 526 895 HOH HOH . C 3 HOH A 27 527 877 HOH HOH . C 3 HOH A 28 528 632 HOH HOH . C 3 HOH A 29 529 849 HOH HOH . C 3 HOH A 30 530 757 HOH HOH . C 3 HOH A 31 531 663 HOH HOH . C 3 HOH A 32 532 609 HOH HOH . C 3 HOH A 33 533 832 HOH HOH . C 3 HOH A 34 534 622 HOH HOH . C 3 HOH A 35 535 642 HOH HOH . C 3 HOH A 36 536 611 HOH HOH . C 3 HOH A 37 537 861 HOH HOH . C 3 HOH A 38 538 816 HOH HOH . C 3 HOH A 39 539 675 HOH HOH . C 3 HOH A 40 540 639 HOH HOH . C 3 HOH A 41 541 680 HOH HOH . C 3 HOH A 42 542 644 HOH HOH . C 3 HOH A 43 543 603 HOH HOH . C 3 HOH A 44 544 635 HOH HOH . C 3 HOH A 45 545 668 HOH HOH . C 3 HOH A 46 546 692 HOH HOH . C 3 HOH A 47 547 624 HOH HOH . C 3 HOH A 48 548 647 HOH HOH . C 3 HOH A 49 549 824 HOH HOH . C 3 HOH A 50 550 648 HOH HOH . C 3 HOH A 51 551 802 HOH HOH . C 3 HOH A 52 552 650 HOH HOH . C 3 HOH A 53 553 815 HOH HOH . C 3 HOH A 54 554 638 HOH HOH . C 3 HOH A 55 555 629 HOH HOH . C 3 HOH A 56 556 880 HOH HOH . C 3 HOH A 57 557 855 HOH HOH . C 3 HOH A 58 558 628 HOH HOH . C 3 HOH A 59 559 901 HOH HOH . C 3 HOH A 60 560 658 HOH HOH . C 3 HOH A 61 561 626 HOH HOH . C 3 HOH A 62 562 677 HOH HOH . C 3 HOH A 63 563 869 HOH HOH . C 3 HOH A 64 564 813 HOH HOH . C 3 HOH A 65 565 893 HOH HOH . C 3 HOH A 66 566 601 HOH HOH . C 3 HOH A 67 567 845 HOH HOH . C 3 HOH A 68 568 616 HOH HOH . C 3 HOH A 69 569 649 HOH HOH . C 3 HOH A 70 570 674 HOH HOH . C 3 HOH A 71 571 854 HOH HOH . C 3 HOH A 72 572 630 HOH HOH . C 3 HOH A 73 573 661 HOH HOH . C 3 HOH A 74 574 918 HOH HOH . C 3 HOH A 75 575 817 HOH HOH . C 3 HOH A 76 576 894 HOH HOH . C 3 HOH A 77 577 667 HOH HOH . C 3 HOH A 78 578 633 HOH HOH . C 3 HOH A 79 579 858 HOH HOH . C 3 HOH A 80 580 903 HOH HOH . C 3 HOH A 81 581 810 HOH HOH . C 3 HOH A 82 582 702 HOH HOH . C 3 HOH A 83 583 806 HOH HOH . C 3 HOH A 84 584 804 HOH HOH . C 3 HOH A 85 585 878 HOH HOH . C 3 HOH A 86 586 843 HOH HOH . C 3 HOH A 87 587 885 HOH HOH . C 3 HOH A 88 588 833 HOH HOH . C 3 HOH A 89 589 714 HOH HOH . C 3 HOH A 90 590 669 HOH HOH . C 3 HOH A 91 591 738 HOH HOH . C 3 HOH A 92 592 841 HOH HOH . C 3 HOH A 93 593 694 HOH HOH . C 3 HOH A 94 594 686 HOH HOH . C 3 HOH A 95 595 715 HOH HOH . C 3 HOH A 96 596 672 HOH HOH . C 3 HOH A 97 597 717 HOH HOH . C 3 HOH A 98 598 681 HOH HOH . C 3 HOH A 99 599 712 HOH HOH . C 3 HOH A 100 600 646 HOH HOH . C 3 HOH A 101 601 811 HOH HOH . C 3 HOH A 102 602 837 HOH HOH . C 3 HOH A 103 603 690 HOH HOH . C 3 HOH A 104 604 654 HOH HOH . C 3 HOH A 105 605 707 HOH HOH . C 3 HOH A 106 606 685 HOH HOH . C 3 HOH A 107 607 698 HOH HOH . C 3 HOH A 108 608 640 HOH HOH . C 3 HOH A 109 609 809 HOH HOH . C 3 HOH A 110 610 620 HOH HOH . C 3 HOH A 111 611 836 HOH HOH . C 3 HOH A 112 612 860 HOH HOH . C 3 HOH A 113 613 872 HOH HOH . C 3 HOH A 114 614 679 HOH HOH . C 3 HOH A 115 615 683 HOH HOH . C 3 HOH A 116 616 708 HOH HOH . C 3 HOH A 117 617 823 HOH HOH . C 3 HOH A 118 618 902 HOH HOH . C 3 HOH A 119 619 705 HOH HOH . C 3 HOH A 120 620 678 HOH HOH . C 3 HOH A 121 621 606 HOH HOH . C 3 HOH A 122 622 652 HOH HOH . C 3 HOH A 123 623 617 HOH HOH . C 3 HOH A 124 624 910 HOH HOH . C 3 HOH A 125 625 670 HOH HOH . C 3 HOH A 126 626 859 HOH HOH . C 3 HOH A 127 627 745 HOH HOH . C 3 HOH A 128 628 857 HOH HOH . C 3 HOH A 129 629 881 HOH HOH . C 3 HOH A 130 630 711 HOH HOH . C 3 HOH A 131 631 751 HOH HOH . C 3 HOH A 132 632 713 HOH HOH . C 3 HOH A 133 633 660 HOH HOH . C 3 HOH A 134 634 866 HOH HOH . C 3 HOH A 135 635 653 HOH HOH . C 3 HOH A 136 636 753 HOH HOH . C 3 HOH A 137 637 868 HOH HOH . C 3 HOH A 138 638 673 HOH HOH . C 3 HOH A 139 639 835 HOH HOH . C 3 HOH A 140 640 696 HOH HOH . C 3 HOH A 141 641 703 HOH HOH . C 3 HOH A 142 642 709 HOH HOH . C 3 HOH A 143 643 908 HOH HOH . C 3 HOH A 144 644 723 HOH HOH . C 3 HOH A 145 645 720 HOH HOH . C 3 HOH A 146 646 693 HOH HOH . C 3 HOH A 147 647 899 HOH HOH . C 3 HOH A 148 648 914 HOH HOH . C 3 HOH A 149 649 840 HOH HOH . C 3 HOH A 150 650 704 HOH HOH . C 3 HOH A 151 651 867 HOH HOH . C 3 HOH A 152 652 897 HOH HOH . C 3 HOH A 153 653 657 HOH HOH . C 3 HOH A 154 654 727 HOH HOH . C 3 HOH A 155 655 838 HOH HOH . C 3 HOH A 156 656 865 HOH HOH . C 3 HOH A 157 657 666 HOH HOH . C 3 HOH A 158 658 744 HOH HOH . C 3 HOH A 159 659 721 HOH HOH . C 3 HOH A 160 660 722 HOH HOH . C 3 HOH A 161 661 890 HOH HOH . C 3 HOH A 162 662 916 HOH HOH . C 3 HOH A 163 663 825 HOH HOH . C 3 HOH A 164 664 830 HOH HOH . C 3 HOH A 165 665 700 HOH HOH . C 3 HOH A 166 666 864 HOH HOH . C 3 HOH A 167 667 856 HOH HOH . C 3 HOH A 168 668 684 HOH HOH . C 3 HOH A 169 669 921 HOH HOH . C 3 HOH A 170 670 812 HOH HOH . C 3 HOH A 171 671 770 HOH HOH . C 3 HOH A 172 672 904 HOH HOH . C 3 HOH A 173 673 731 HOH HOH . C 3 HOH A 174 674 827 HOH HOH . C 3 HOH A 175 675 913 HOH HOH . C 3 HOH A 176 676 762 HOH HOH . C 3 HOH A 177 677 846 HOH HOH . C 3 HOH A 178 678 742 HOH HOH . C 3 HOH A 179 679 818 HOH HOH . C 3 HOH A 180 680 842 HOH HOH . C 3 HOH A 181 681 747 HOH HOH . C 3 HOH A 182 682 735 HOH HOH . C 3 HOH A 183 683 764 HOH HOH . C 3 HOH A 184 684 725 HOH HOH . C 3 HOH A 185 685 847 HOH HOH . C 3 HOH A 186 686 889 HOH HOH . C 3 HOH A 187 687 743 HOH HOH . C 3 HOH A 188 688 886 HOH HOH . C 3 HOH A 189 689 716 HOH HOH . C 3 HOH A 190 690 748 HOH HOH . C 3 HOH A 191 691 730 HOH HOH . C 3 HOH A 192 692 883 HOH HOH . C 3 HOH A 193 693 819 HOH HOH . C 3 HOH A 194 694 756 HOH HOH . C 3 HOH A 195 695 820 HOH HOH . C 3 HOH A 196 696 801 HOH HOH . C 3 HOH A 197 697 884 HOH HOH . C 3 HOH A 198 698 850 HOH HOH . C 3 HOH A 199 699 862 HOH HOH . C 3 HOH A 200 700 760 HOH HOH . C 3 HOH A 201 701 732 HOH HOH . C 3 HOH A 202 702 871 HOH HOH . C 3 HOH A 203 703 814 HOH HOH . C 3 HOH A 204 704 768 HOH HOH . C 3 HOH A 205 705 821 HOH HOH . C 3 HOH A 206 706 623 HOH HOH . C 3 HOH A 207 707 803 HOH HOH . C 3 HOH A 208 708 766 HOH HOH . C 3 HOH A 209 709 875 HOH HOH . C 3 HOH A 210 710 755 HOH HOH . C 3 HOH A 211 711 882 HOH HOH . C 3 HOH A 212 712 765 HOH HOH . C 3 HOH A 213 713 834 HOH HOH . C 3 HOH A 214 714 919 HOH HOH . C 3 HOH A 215 715 828 HOH HOH . C 3 HOH A 216 716 758 HOH HOH . C 3 HOH A 217 717 763 HOH HOH . C 3 HOH A 218 718 805 HOH HOH . C 3 HOH A 219 719 754 HOH HOH . C 3 HOH A 220 720 887 HOH HOH . C 3 HOH A 221 721 896 HOH HOH . C 3 HOH A 222 722 710 HOH HOH . C 3 HOH A 223 723 870 HOH HOH . C 3 HOH A 224 724 771 HOH HOH . C 3 HOH A 225 725 831 HOH HOH . C 3 HOH A 226 726 900 HOH HOH . C 3 HOH A 227 727 767 HOH HOH . C 3 HOH A 228 728 879 HOH HOH . C 3 HOH A 229 729 848 HOH HOH . C 3 HOH A 230 730 874 HOH HOH . C 3 HOH A 231 731 917 HOH HOH . C 3 HOH A 232 732 852 HOH HOH . C 3 HOH A 233 733 873 HOH HOH . C 3 HOH A 234 734 888 HOH HOH . C 3 HOH A 235 735 776 HOH HOH . C 3 HOH A 236 736 906 HOH HOH . C 3 HOH A 237 737 891 HOH HOH . C 3 HOH A 238 738 853 HOH HOH . C 3 HOH A 239 739 892 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 XEY . . . B 2 6.062 -0.37 25.914 1 31.2 ? C1 XEY 400 A 1 HETATM 2 C C2 XEY . . . B 2 6.775 0.107 24.827 1 26.22 ? C2 XEY 400 A 1 HETATM 3 C C5 XEY . . . B 2 8.237 -0.276 22.814 1 25.66 ? C5 XEY 400 A 1 HETATM 4 C C6 XEY . . . B 2 7.408 -2.146 24.297 1 31.17 ? C6 XEY 400 A 1 HETATM 5 C C11 XEY . . . B 2 9.063 0.85 22.875 1 28.82 ? C11 XEY 400 A 1 HETATM 6 C C12 XEY . . . B 2 8.668 -1.251 19.149 1 22.91 ? C12 XEY 400 A 1 HETATM 7 C C13 XEY . . . B 2 10.69 2.531 21.836 1 29.82 ? C13 XEY 400 A 1 HETATM 8 C C14 XEY . . . B 2 9.741 -1.877 18.576 1 27.7 ? C14 XEY 400 A 1 HETATM 9 C C15 XEY . . . B 2 9.606 -2.544 17.405 1 26.09 ? C15 XEY 400 A 1 HETATM 10 C C16 XEY . . . B 2 8.381 -2.578 16.788 1 27.1 ? C16 XEY 400 A 1 HETATM 11 C C17 XEY . . . B 2 7.424 -1.305 18.499 1 23.16 ? C17 XEY 400 A 1 HETATM 12 C C10 XEY . . . B 2 9.773 1.313 21.712 1 27.49 ? C10 XEY 400 A 1 HETATM 13 C C18 XEY . . . B 2 10.76 3.569 20.902 1 32.5 ? C18 XEY 400 A 1 HETATM 14 C C19 XEY . . . B 2 11.637 4.622 21.105 1 34.65 ? C19 XEY 400 A 1 HETATM 15 C C20 XEY . . . B 2 12.445 4.658 22.22 1 35.83 ? C20 XEY 400 A 1 HETATM 16 C C21 XEY . . . B 2 12.389 3.649 23.15 1 32.1 ? C21 XEY 400 A 1 HETATM 17 C C22 XEY . . . B 2 11.519 2.589 22.964 1 33.01 ? C22 XEY 400 A 1 HETATM 18 C C23 XEY . . . B 2 9.907 3.602 19.633 1 28.19 ? C23 XEY 400 A 1 HETATM 19 C C3 XEY . . . B 2 6.02 -1.722 26.198 1 32.62 ? C3 XEY 400 A 1 HETATM 20 C C4 XEY . . . B 2 7.457 -0.788 24.021 1 26.93 ? C4 XEY 400 A 1 HETATM 21 C C7 XEY . . . B 2 6.692 -2.613 25.385 1 33.38 ? C7 XEY 400 A 1 HETATM 22 C C8 XEY . . . B 2 8.121 -0.978 21.522 1 24.37 ? C8 XEY 400 A 1 HETATM 23 C C9 XEY . . . B 2 9.666 0.615 20.468 1 27.01 ? C9 XEY 400 A 1 HETATM 24 N N1 XEY . . . B 2 8.816 -0.534 20.4 1 27 ? N1 XEY 400 A 1 HETATM 25 N N2 XEY . . . B 2 7.322 -1.971 17.339 1 24.18 ? N2 XEY 400 A 1 HETATM 26 N N3 XEY . . . B 2 9.284 3.638 18.69 1 23.36 ? N3 XEY 400 A 1 HETATM 27 O O1 XEY . . . B 2 7.32 -2.102 21.427 1 23.86 ? O1 XEY 400 A 1 HETATM 28 CL CL1 XEY . . . B 2 5.2 0.775 26.968 1 37.46 ? CL1 XEY 400 A 1 HETATM 29 CL CL2 XEY . . . B 2 6.629 -4.358 25.73 1 37.74 ? CL2 XEY 400 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #