data_7L1G # _model_server_result.job_id GTdW1M1XLNo9RMwq7f29Gg _model_server_result.datetime_utc '2025-07-08 02:27:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l1g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":714}' # _entry.id 7L1G # _exptl.entry_id 7L1G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.437 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-ADENOSYLMETHIONINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7L1G _cell.length_a 101.548 _cell.length_b 138.78 _cell.length_c 178.156 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L1G _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 216 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 208 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 255 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 247 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.042 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H22 N6 O5 S' _chem_comp.formula_weight 398.437 _chem_comp.id SAM _chem_comp.mon_nstd_flag . _chem_comp.name S-ADENOSYLMETHIONINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SAM sing 286 n n N HN1 SAM sing 287 n n N HN2 SAM sing 288 n n CA C SAM sing 289 n n CA CB SAM sing 290 n n CA HA SAM sing 291 n n C O SAM doub 292 n n C OXT SAM sing 293 n n CB CG SAM sing 294 n n CB HB1 SAM sing 295 n n CB HB2 SAM sing 296 n n CG SD SAM sing 297 n n CG HG1 SAM sing 298 n n CG HG2 SAM sing 299 n n SD CE SAM sing 300 n n SD C5' SAM sing 301 n n CE HE1 SAM sing 302 n n CE HE2 SAM sing 303 n n CE HE3 SAM sing 304 n n C5' C4' SAM sing 305 n n C5' "H5'1" SAM sing 306 n n C5' "H5'2" SAM sing 307 n n C4' O4' SAM sing 308 n n C4' C3' SAM sing 309 n n C4' H4' SAM sing 310 n n O4' C1' SAM sing 311 n n C3' O3' SAM sing 312 n n C3' C2' SAM sing 313 n n C3' H3' SAM sing 314 n n O3' HO3' SAM sing 315 n n C2' O2' SAM sing 316 n n C2' C1' SAM sing 317 n n C2' H2' SAM sing 318 n n O2' HO2' SAM sing 319 n n C1' N9 SAM sing 320 n n C1' H1' SAM sing 321 n n N9 C8 SAM sing 322 n y N9 C4 SAM sing 323 n y C8 N7 SAM doub 324 n y C8 H8 SAM sing 325 n n N7 C5 SAM sing 326 n y C5 C6 SAM sing 327 n y C5 C4 SAM doub 328 n y C6 N6 SAM sing 329 n n C6 N1 SAM doub 330 n y N6 HN61 SAM sing 331 n n N6 HN62 SAM sing 332 n n N1 C2 SAM sing 333 n y C2 N3 SAM doub 334 n y C2 H2 SAM sing 335 n n N3 C4 SAM sing 336 n y # _atom_sites.entry_id 7L1G _atom_sites.fract_transf_matrix[1][1] 0.009848 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007206 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005613 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 701 1 EDO EDO . D 3 EDO A 1 702 2 EDO EDO . E 3 EDO A 1 703 3 EDO EDO . F 3 EDO A 1 704 5 EDO EDO . G 3 EDO A 1 705 6 EDO EDO . H 3 EDO A 1 706 7 EDO EDO . I 3 EDO A 1 707 8 EDO EDO . J 3 EDO A 1 708 9 EDO EDO . K 3 EDO A 1 709 10 EDO EDO . L 3 EDO A 1 710 12 EDO EDO . M 3 EDO A 1 711 13 EDO EDO . N 4 CL A 1 712 1 CL CL . O 4 CL A 1 713 2 CL CL . P 5 SAM A 1 714 1 SAM SAM . Q 3 EDO B 1 401 4 EDO EDO . R 3 EDO B 1 402 11 EDO EDO . S 3 EDO B 1 403 14 EDO EDO . T 3 EDO B 1 404 15 EDO EDO . U 6 HOH A 1 801 94 HOH HOH . U 6 HOH A 2 802 104 HOH HOH . U 6 HOH A 3 803 59 HOH HOH . U 6 HOH A 4 804 97 HOH HOH . U 6 HOH A 5 805 13 HOH HOH . U 6 HOH A 6 806 100 HOH HOH . U 6 HOH A 7 807 45 HOH HOH . U 6 HOH A 8 808 11 HOH HOH . U 6 HOH A 9 809 25 HOH HOH . U 6 HOH A 10 810 20 HOH HOH . U 6 HOH A 11 811 122 HOH HOH . U 6 HOH A 12 812 69 HOH HOH . U 6 HOH A 13 813 106 HOH HOH . U 6 HOH A 14 814 47 HOH HOH . U 6 HOH A 15 815 89 HOH HOH . U 6 HOH A 16 816 88 HOH HOH . U 6 HOH A 17 817 37 HOH HOH . U 6 HOH A 18 818 7 HOH HOH . U 6 HOH A 19 819 16 HOH HOH . U 6 HOH A 20 820 4 HOH HOH . U 6 HOH A 21 821 2 HOH HOH . U 6 HOH A 22 822 105 HOH HOH . U 6 HOH A 23 823 54 HOH HOH . U 6 HOH A 24 824 66 HOH HOH . U 6 HOH A 25 825 22 HOH HOH . U 6 HOH A 26 826 51 HOH HOH . U 6 HOH A 27 827 119 HOH HOH . U 6 HOH A 28 828 12 HOH HOH . U 6 HOH A 29 829 77 HOH HOH . U 6 HOH A 30 830 68 HOH HOH . U 6 HOH A 31 831 85 HOH HOH . U 6 HOH A 32 832 34 HOH HOH . U 6 HOH A 33 833 98 HOH HOH . U 6 HOH A 34 834 121 HOH HOH . U 6 HOH A 35 835 18 HOH HOH . U 6 HOH A 36 836 83 HOH HOH . U 6 HOH A 37 837 103 HOH HOH . U 6 HOH A 38 838 3 HOH HOH . U 6 HOH A 39 839 19 HOH HOH . U 6 HOH A 40 840 115 HOH HOH . U 6 HOH A 41 841 114 HOH HOH . U 6 HOH A 42 842 71 HOH HOH . U 6 HOH A 43 843 31 HOH HOH . U 6 HOH A 44 844 56 HOH HOH . U 6 HOH A 45 845 53 HOH HOH . U 6 HOH A 46 846 75 HOH HOH . U 6 HOH A 47 847 17 HOH HOH . U 6 HOH A 48 848 14 HOH HOH . U 6 HOH A 49 849 44 HOH HOH . U 6 HOH A 50 850 76 HOH HOH . U 6 HOH A 51 851 84 HOH HOH . U 6 HOH A 52 852 61 HOH HOH . U 6 HOH A 53 853 40 HOH HOH . U 6 HOH A 54 854 43 HOH HOH . U 6 HOH A 55 855 26 HOH HOH . U 6 HOH A 56 856 81 HOH HOH . U 6 HOH A 57 857 24 HOH HOH . U 6 HOH A 58 858 96 HOH HOH . U 6 HOH A 59 859 36 HOH HOH . U 6 HOH A 60 860 78 HOH HOH . U 6 HOH A 61 861 23 HOH HOH . U 6 HOH A 62 862 28 HOH HOH . U 6 HOH A 63 863 116 HOH HOH . U 6 HOH A 64 864 39 HOH HOH . U 6 HOH A 65 865 67 HOH HOH . U 6 HOH A 66 866 38 HOH HOH . U 6 HOH A 67 867 42 HOH HOH . U 6 HOH A 68 868 64 HOH HOH . U 6 HOH A 69 869 48 HOH HOH . U 6 HOH A 70 870 52 HOH HOH . U 6 HOH A 71 871 41 HOH HOH . U 6 HOH A 72 872 95 HOH HOH . U 6 HOH A 73 873 5 HOH HOH . U 6 HOH A 74 874 21 HOH HOH . U 6 HOH A 75 875 128 HOH HOH . U 6 HOH A 76 876 33 HOH HOH . U 6 HOH A 77 877 8 HOH HOH . U 6 HOH A 78 878 118 HOH HOH . U 6 HOH A 79 879 6 HOH HOH . U 6 HOH A 80 880 1 HOH HOH . U 6 HOH A 81 881 117 HOH HOH . U 6 HOH A 82 882 46 HOH HOH . U 6 HOH A 83 883 74 HOH HOH . U 6 HOH A 84 884 87 HOH HOH . U 6 HOH A 85 885 131 HOH HOH . U 6 HOH A 86 886 113 HOH HOH . U 6 HOH A 87 887 101 HOH HOH . U 6 HOH A 88 888 80 HOH HOH . U 6 HOH A 89 889 49 HOH HOH . U 6 HOH A 90 890 63 HOH HOH . U 6 HOH A 91 891 62 HOH HOH . U 6 HOH A 92 892 32 HOH HOH . U 6 HOH A 93 893 60 HOH HOH . U 6 HOH A 94 894 82 HOH HOH . U 6 HOH A 95 895 125 HOH HOH . U 6 HOH A 96 896 120 HOH HOH . U 6 HOH A 97 897 102 HOH HOH . U 6 HOH A 98 898 107 HOH HOH . U 6 HOH A 99 899 99 HOH HOH . U 6 HOH A 100 900 73 HOH HOH . U 6 HOH A 101 901 130 HOH HOH . U 6 HOH A 102 902 133 HOH HOH . U 6 HOH A 103 903 126 HOH HOH . U 6 HOH A 104 904 127 HOH HOH . U 6 HOH A 105 905 93 HOH HOH . U 6 HOH A 106 906 86 HOH HOH . U 6 HOH A 107 907 92 HOH HOH . V 6 HOH B 1 501 57 HOH HOH . V 6 HOH B 2 502 30 HOH HOH . V 6 HOH B 3 503 110 HOH HOH . V 6 HOH B 4 504 55 HOH HOH . V 6 HOH B 5 505 10 HOH HOH . V 6 HOH B 6 506 70 HOH HOH . V 6 HOH B 7 507 15 HOH HOH . V 6 HOH B 8 508 58 HOH HOH . V 6 HOH B 9 509 35 HOH HOH . V 6 HOH B 10 510 108 HOH HOH . V 6 HOH B 11 511 109 HOH HOH . V 6 HOH B 12 512 91 HOH HOH . V 6 HOH B 13 513 9 HOH HOH . V 6 HOH B 14 514 65 HOH HOH . V 6 HOH B 15 515 27 HOH HOH . V 6 HOH B 16 516 124 HOH HOH . V 6 HOH B 17 517 50 HOH HOH . V 6 HOH B 18 518 112 HOH HOH . V 6 HOH B 19 519 79 HOH HOH . V 6 HOH B 20 520 129 HOH HOH . V 6 HOH B 21 521 132 HOH HOH . V 6 HOH B 22 522 123 HOH HOH . V 6 HOH B 23 523 72 HOH HOH . V 6 HOH B 24 524 111 HOH HOH . V 6 HOH B 25 525 90 HOH HOH . V 6 HOH B 26 526 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SAM . . . P 5 22.765 -43.082 -9.838 1 78.59 ? N SAM 714 A 1 HETATM 2 C CA SAM . . . P 5 21.449 -43.029 -9.185 1 76.79 ? CA SAM 714 A 1 HETATM 3 C C SAM . . . P 5 20.336 -43.895 -9.921 1 74.51 ? C SAM 714 A 1 HETATM 4 O O SAM . . . P 5 19.173 -43.438 -9.912 1 70.74 ? O SAM 714 A 1 HETATM 5 O OXT SAM . . . P 5 20.69 -44.996 -10.432 1 74.69 ? OXT SAM 714 A 1 HETATM 6 C CB SAM . . . P 5 20.969 -41.572 -9.038 1 76.9 ? CB SAM 714 A 1 HETATM 7 C CG SAM . . . P 5 20.187 -41.391 -7.709 1 78.5 ? CG SAM 714 A 1 HETATM 8 S SD SAM . . . P 5 20.496 -39.756 -7.064 1 79.61 ? SD SAM 714 A 1 HETATM 9 C CE SAM . . . P 5 21.714 -40.087 -5.866 1 82.58 ? CE SAM 714 A 1 HETATM 10 C C5' SAM . . . P 5 18.922 -39.464 -6.181 1 71.4 ? C5' SAM 714 A 1 HETATM 11 C C4' SAM . . . P 5 18.994 -38.517 -4.954 1 65.92 ? C4' SAM 714 A 1 HETATM 12 O O4' SAM . . . P 5 17.892 -37.571 -4.936 1 65.71 ? O4' SAM 714 A 1 HETATM 13 C C3' SAM . . . P 5 18.931 -39.273 -3.624 1 63.1 ? C3' SAM 714 A 1 HETATM 14 O O3' SAM . . . P 5 19.942 -38.795 -2.745 1 60.52 ? O3' SAM 714 A 1 HETATM 15 C C2' SAM . . . P 5 17.493 -39.01 -3.143 1 62.17 ? C2' SAM 714 A 1 HETATM 16 O O2' SAM . . . P 5 17.335 -39.084 -1.731 1 62.55 ? O2' SAM 714 A 1 HETATM 17 C C1' SAM . . . P 5 17.26 -37.606 -3.671 1 60.7 ? C1' SAM 714 A 1 HETATM 18 N N9 SAM . . . P 5 15.852 -37.253 -3.845 1 57.82 ? N9 SAM 714 A 1 HETATM 19 C C8 SAM . . . P 5 14.892 -37.993 -4.485 1 58 ? C8 SAM 714 A 1 HETATM 20 N N7 SAM . . . P 5 13.688 -37.478 -4.42 1 56.87 ? N7 SAM 714 A 1 HETATM 21 C C5 SAM . . . P 5 13.869 -36.308 -3.699 1 55.83 ? C5 SAM 714 A 1 HETATM 22 C C6 SAM . . . P 5 12.98 -35.277 -3.323 1 58.19 ? C6 SAM 714 A 1 HETATM 23 N N6 SAM . . . P 5 11.694 -35.231 -3.695 1 57.87 ? N6 SAM 714 A 1 HETATM 24 N N1 SAM . . . P 5 13.489 -34.232 -2.63 1 58.86 ? N1 SAM 714 A 1 HETATM 25 C C2 SAM . . . P 5 14.799 -34.216 -2.356 1 60.87 ? C2 SAM 714 A 1 HETATM 26 N N3 SAM . . . P 5 15.732 -35.128 -2.661 1 61.1 ? N3 SAM 714 A 1 HETATM 27 C C4 SAM . . . P 5 15.198 -36.154 -3.34 1 57.23 ? C4 SAM 714 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 27 #