data_7L1K
#
_model_server_result.job_id            4ANZslVIjchMWb0CVx2F9g 
_model_server_result.datetime_utc      '2025-08-31 03:45:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7l1k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    7L1K 
#
_exptl.entry_id    7L1K 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              825.57 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CARBOXYMETHYL COENZYME *A' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7L1K 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7L1K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H38 N7 O18 P3 S' 
_chem_comp.formula_weight    825.57 
_chem_comp.id                CMC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CARBOXYMETHYL COENZYME *A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1A C2A CMC sing 70 n y 
N1A C6A CMC doub 71 n y 
C2A N3A CMC doub 72 n y 
C2A H2A CMC sing 73 n n 
N3A C4A CMC sing 74 n y 
C4A C5A CMC doub 75 n y 
C4A N9A CMC sing 76 n y 
C5A C6A CMC sing 77 n y 
C5A N7A CMC sing 78 n y 
C6A N6A CMC sing 79 n n 
N6A H61A CMC sing 80 n n 
N6A H62A CMC sing 81 n n 
N7A C8A CMC doub 82 n y 
C8A N9A CMC sing 83 n y 
C8A H8A CMC sing 84 n n 
N9A C1B CMC sing 85 n n 
C1B C2B CMC sing 86 n n 
C1B O4B CMC sing 87 n n 
C1B H1B CMC sing 88 n n 
C2B O2B CMC sing 89 n n 
C2B C3B CMC sing 90 n n 
C2B H2B CMC sing 91 n n 
O2B HO2A CMC sing 92 n n 
C3B O3B CMC sing 93 n n 
C3B C4B CMC sing 94 n n 
C3B H3B CMC sing 95 n n 
O3B P3B CMC sing 96 n n 
P3B O7A CMC doub 97 n n 
P3B O8A CMC sing 98 n n 
P3B O9A CMC sing 99 n n 
O8A HOA8 CMC sing 100 n n 
O9A HOA9 CMC sing 101 n n 
C4B O4B CMC sing 102 n n 
C4B C5B CMC sing 103 n n 
C4B H4B CMC sing 104 n n 
C5B O5B CMC sing 105 n n 
C5B H51A CMC sing 106 n n 
C5B H52A CMC sing 107 n n 
O5B P1A CMC sing 108 n n 
P1A O1A CMC doub 109 n n 
P1A O2A CMC sing 110 n n 
P1A O3A CMC sing 111 n n 
O2A HOA2 CMC sing 112 n n 
O3A P2A CMC sing 113 n n 
P2A O4A CMC doub 114 n n 
P2A O5A CMC sing 115 n n 
P2A O6A CMC sing 116 n n 
O5A HOA5 CMC sing 117 n n 
O6A CCP CMC sing 118 n n 
CBP CCP CMC sing 119 n n 
CBP CDP CMC sing 120 n n 
CBP CEP CMC sing 121 n n 
CBP CAP CMC sing 122 n n 
CCP H121 CMC sing 123 n n 
CCP H122 CMC sing 124 n n 
CDP H131 CMC sing 125 n n 
CDP H132 CMC sing 126 n n 
CDP H133 CMC sing 127 n n 
CEP H141 CMC sing 128 n n 
CEP H142 CMC sing 129 n n 
CEP H143 CMC sing 130 n n 
CAP OAP CMC sing 131 n n 
CAP C9P CMC sing 132 n n 
CAP H10 CMC sing 133 n n 
OAP HO1 CMC sing 134 n n 
C9P O9P CMC doub 135 n n 
C9P N8P CMC sing 136 n n 
N8P C7P CMC sing 137 n n 
N8P HN8 CMC sing 138 n n 
C7P C6P CMC sing 139 n n 
C7P H71 CMC sing 140 n n 
C7P H72 CMC sing 141 n n 
C6P C5P CMC sing 142 n n 
C6P H61 CMC sing 143 n n 
C6P H62 CMC sing 144 n n 
C5P O5P CMC doub 145 n n 
C5P N4P CMC sing 146 n n 
N4P C3P CMC sing 147 n n 
N4P HN4 CMC sing 148 n n 
C3P C2P CMC sing 149 n n 
C3P H31 CMC sing 150 n n 
C3P H32 CMC sing 151 n n 
C2P S1P CMC sing 152 n n 
C2P H21 CMC sing 153 n n 
C2P H22 CMC sing 154 n n 
S1P C1 CMC sing 155 n n 
C1 C2 CMC sing 156 n n 
C1 H11 CMC sing 157 n n 
C1 H12 CMC sing 158 n n 
C2 O21 CMC doub 159 n n 
C2 O22 CMC sing 160 n n 
O22 HO22 CMC sing 161 n n 
#
_atom_sites.entry_id                     7L1K 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 IHP A 1 301 301 IHP IHP . 
F 6 CMC D 1 501 201 CMC CMC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A CMC . . . F 6 19.245 -17.509 2.052 1 69.19 ? N1A CMC 501 D 1 
HETATM 2 C C2A CMC . . . F 6 18.746 -18.053 0.941 1 69.19 ? C2A CMC 501 D 1 
HETATM 3 N N3A CMC . . . F 6 18.019 -19.149 0.805 1 69.19 ? N3A CMC 501 D 1 
HETATM 4 C C4A CMC . . . F 6 17.788 -19.715 1.995 1 69.19 ? C4A CMC 501 D 1 
HETATM 5 C C5A CMC . . . F 6 18.228 -19.278 3.214 1 69.19 ? C5A CMC 501 D 1 
HETATM 6 C C6A CMC . . . F 6 19.001 -18.114 3.23 1 69.19 ? C6A CMC 501 D 1 
HETATM 7 N N6A CMC . . . F 6 19.493 -17.577 4.334 1 69.19 ? N6A CMC 501 D 1 
HETATM 8 N N7A CMC . . . F 6 17.784 -20.128 4.208 1 69.19 ? N7A CMC 501 D 1 
HETATM 9 C C8A CMC . . . F 6 17.095 -21.038 3.57 1 69.19 ? C8A CMC 501 D 1 
HETATM 10 N N9A CMC . . . F 6 17.062 -20.839 2.243 1 69.19 ? N9A CMC 501 D 1 
HETATM 11 C C1B CMC . . . F 6 16.442 -21.617 1.275 1 69.19 ? C1B CMC 501 D 1 
HETATM 12 C C2B CMC . . . F 6 17.469 -22.348 0.434 1 69.19 ? C2B CMC 501 D 1 
HETATM 13 O O2B CMC . . . F 6 17.173 -22.391 -0.938 1 69.19 ? O2B CMC 501 D 1 
HETATM 14 C C3B CMC . . . F 6 17.427 -23.754 0.991 1 69.19 ? C3B CMC 501 D 1 
HETATM 15 O O3B CMC . . . F 6 17.842 -24.714 0.044 1 69.19 ? O3B CMC 501 D 1 
HETATM 16 P P3B CMC . . . F 6 19.382 -24.431 -0.221 1 69.19 ? P3B CMC 501 D 1 
HETATM 17 O O7A CMC . . . F 6 19.619 -23.148 -0.933 1 69.19 ? O7A CMC 501 D 1 
HETATM 18 O O8A CMC . . . F 6 19.731 -25.606 -1.061 1 69.19 ? O8A CMC 501 D 1 
HETATM 19 O O9A CMC . . . F 6 20.069 -24.454 1.109 1 69.19 ? O9A CMC 501 D 1 
HETATM 20 C C4B CMC . . . F 6 15.974 -23.863 1.325 1 69.19 ? C4B CMC 501 D 1 
HETATM 21 O O4B CMC . . . F 6 15.745 -22.602 1.963 1 69.19 ? O4B CMC 501 D 1 
HETATM 22 C C5B CMC . . . F 6 15.599 -24.962 2.286 1 69.19 ? C5B CMC 501 D 1 
HETATM 23 O O5B CMC . . . F 6 16.244 -24.804 3.558 1 69.19 ? O5B CMC 501 D 1 
HETATM 24 P P1A CMC . . . F 6 15.517 -25.457 4.768 1 69.19 ? P1A CMC 501 D 1 
HETATM 25 O O1A CMC . . . F 6 14.288 -26.07 4.289 1 69.19 ? O1A CMC 501 D 1 
HETATM 26 O O2A CMC . . . F 6 16.429 -26.344 5.447 1 69.19 ? O2A CMC 501 D 1 
HETATM 27 O O3A CMC . . . F 6 15.269 -24.179 5.606 1 69.19 ? O3A CMC 501 D 1 
HETATM 28 P P2A CMC . . . F 6 15.137 -23.732 7.084 1 69.19 ? P2A CMC 501 D 1 
HETATM 29 O O4A CMC . . . F 6 16.47 -23.717 7.66 1 69.19 ? O4A CMC 501 D 1 
HETATM 30 O O5A CMC . . . F 6 14.083 -24.524 7.698 1 69.19 ? O5A CMC 501 D 1 
HETATM 31 O O6A CMC . . . F 6 14.645 -22.232 7.02 1 69.19 ? O6A CMC 501 D 1 
HETATM 32 C CBP CMC . . . F 6 12.698 -20.855 7.433 1 69.19 ? CBP CMC 501 D 1 
HETATM 33 C CCP CMC . . . F 6 13.301 -21.982 6.636 1 69.19 ? CCP CMC 501 D 1 
HETATM 34 C CDP CMC . . . F 6 11.969 -19.937 6.484 1 69.19 ? CDP CMC 501 D 1 
HETATM 35 C CEP CMC . . . F 6 11.686 -21.371 8.418 1 69.19 ? CEP CMC 501 D 1 
HETATM 36 C CAP CMC . . . F 6 13.707 -20.093 8.217 1 69.19 ? CAP CMC 501 D 1 
HETATM 37 O OAP CMC . . . F 6 14.345 -19.272 7.332 1 69.19 ? OAP CMC 501 D 1 
HETATM 38 C C9P CMC . . . F 6 13.044 -19.28 9.283 1 69.19 ? C9P CMC 501 D 1 
HETATM 39 O O9P CMC . . . F 6 13.234 -19.561 10.432 1 69.19 ? O9P CMC 501 D 1 
HETATM 40 N N8P CMC . . . F 6 12.374 -18.203 8.973 1 69.19 ? N8P CMC 501 D 1 
HETATM 41 C C7P CMC . . . F 6 12.318 -17.137 9.951 1 69.19 ? C7P CMC 501 D 1 
HETATM 42 C C6P CMC . . . F 6 10.949 -16.862 10.35 1 69.19 ? C6P CMC 501 D 1 
HETATM 43 C C5P CMC . . . F 6 10.218 -16.7 9.053 1 69.19 ? C5P CMC 501 D 1 
HETATM 44 O O5P CMC . . . F 6 10.258 -15.661 8.448 1 69.19 ? O5P CMC 501 D 1 
HETATM 45 N N4P CMC . . . F 6 9.581 -17.741 8.578 1 69.19 ? N4P CMC 501 D 1 
HETATM 46 C C3P CMC . . . F 6 8.331 -17.625 7.871 1 69.19 ? C3P CMC 501 D 1 
HETATM 47 C C2P CMC . . . F 6 8.418 -16.631 6.739 1 69.19 ? C2P CMC 501 D 1 
HETATM 48 S S1P CMC . . . F 6 6.847 -16.724 5.878 1 69.19 ? S1P CMC 501 D 1 
HETATM 49 C C1 CMC . . . F 6 5.733 -16.983 7.248 1 69.19 ? C1 CMC 501 D 1 
HETATM 50 C C2 CMC . . . F 6 4.455 -16.766 6.498 1 69.19 ? C2 CMC 501 D 1 
HETATM 51 O O21 CMC . . . F 6 4.414 -17.73 5.787 1 69.19 ? O21 CMC 501 D 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           415 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           51 
#