data_7L2O # _model_server_result.job_id CtwI-RKsl1A2kd4nNGU9ag _model_server_result.datetime_utc '2024-11-14 17:28:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l2o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":901}' # _entry.id 7L2O # _exptl.entry_id 7L2O _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 628.708 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description resiniferatoxin _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7L2O _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L2O _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 390 A CYS 386 1_555 A SG CYS 394 A CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 B SG CYS 390 C CYS 386 1_555 B SG CYS 394 C CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 C SG CYS 390 D CYS 386 1_555 C SG CYS 394 D CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 D SG CYS 390 B CYS 386 1_555 D SG CYS 394 B CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C37 H40 O9' _chem_comp.formula_weight 628.708 _chem_comp.id 6EU _chem_comp.mon_nstd_flag . _chem_comp.name resiniferatoxin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms RTX # _atom_sites.entry_id 7L2O _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 6EU A 1 901 901 6EU 6EU . F 2 6EU C 1 901 901 6EU 6EU . G 2 6EU D 1 901 901 6EU 6EU . H 2 6EU B 1 901 901 6EU 6EU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBT 6EU . . . H 2 133.667 155.947 119.15 1 60.97 ? CBT 6EU 901 B 1 HETATM 2 O OAH 6EU . . . H 2 133.931 154.998 120.174 1 60.97 ? OAH 6EU 901 B 1 HETATM 3 C CBQ 6EU . . . H 2 133.473 153.726 120.009 1 60.97 ? CBQ 6EU 901 B 1 HETATM 4 C CBO 6EU . . . H 2 133.421 153.18 118.738 1 60.97 ? CBO 6EU 901 B 1 HETATM 5 C CBS 6EU . . . H 2 133.069 152.996 121.105 1 60.97 ? CBS 6EU 901 B 1 HETATM 6 O OAI 6EU . . . H 2 133.128 153.546 122.346 1 60.97 ? OAI 6EU 901 B 1 HETATM 7 C CBR 6EU . . . H 2 132.604 151.701 120.941 1 60.97 ? CBR 6EU 901 B 1 HETATM 8 C CBP 6EU . . . H 2 132.547 151.145 119.671 1 60.97 ? CBP 6EU 901 B 1 HETATM 9 C CBN 6EU . . . H 2 132.96 151.884 118.573 1 60.97 ? CBN 6EU 901 B 1 HETATM 10 C CBM 6EU . . . H 2 132.895 151.283 117.194 1 60.97 ? CBM 6EU 901 B 1 HETATM 11 C CBK 6EU . . . H 2 133.998 150.273 117.006 1 60.97 ? CBK 6EU 901 B 1 HETATM 12 O OAG 6EU . . . H 2 134.076 149.294 117.723 1 60.97 ? OAG 6EU 901 B 1 HETATM 13 O OAF 6EU . . . H 2 134.983 150.457 115.961 1 60.97 ? OAF 6EU 901 B 1 HETATM 14 C CBC 6EU . . . H 2 135.154 149.514 114.91 1 60.97 ? CBC 6EU 901 B 1 HETATM 15 C CAX 6EU . . . H 2 136.221 150.141 114.07 1 60.97 ? CAX 6EU 901 B 1 HETATM 16 C CAS 6EU . . . H 2 137.409 150.259 114.681 1 60.97 ? CAS 6EU 901 B 1 HETATM 17 C CAK 6EU . . . H 2 138.715 150.871 114.232 1 60.97 ? CAK 6EU 901 B 1 HETATM 18 C CAU 6EU . . . H 2 135.841 150.572 112.676 1 60.97 ? CAU 6EU 901 B 1 HETATM 19 C CAR 6EU . . . H 2 136.991 151.101 111.855 1 60.97 ? CAR 6EU 901 B 1 HETATM 20 O OAD 6EU . . . H 2 137.297 152.435 112.223 1 60.97 ? OAD 6EU 901 B 1 HETATM 21 C CAZ 6EU . . . H 2 136.626 151.144 110.41 1 60.97 ? CAZ 6EU 901 B 1 HETATM 22 O OAE 6EU . . . H 2 135.561 151.516 109.971 1 60.97 ? OAE 6EU 901 B 1 HETATM 23 C CBA 6EU . . . H 2 137.729 150.693 109.611 1 60.97 ? CBA 6EU 901 B 1 HETATM 24 C CBF 6EU . . . H 2 137.843 150.874 108.131 1 60.97 ? CBF 6EU 901 B 1 HETATM 25 C CAW 6EU . . . H 2 138.634 150.121 110.398 1 60.97 ? CAW 6EU 901 B 1 HETATM 26 C CAO 6EU . . . H 2 138.188 150.152 111.853 1 60.97 ? CAO 6EU 901 B 1 HETATM 27 C CAJ 6EU . . . H 2 139.294 150.452 112.883 1 60.97 ? CAJ 6EU 901 B 1 HETATM 28 O OAA 6EU . . . H 2 140.033 149.246 113.044 1 60.97 ? OAA 6EU 901 B 1 HETATM 29 C CAN 6EU . . . H 2 140.273 151.56 112.48 1 60.97 ? CAN 6EU 901 B 1 HETATM 30 C CAT 6EU . . . H 2 141.445 151.101 111.613 1 60.97 ? CAT 6EU 901 B 1 HETATM 31 C CAP 6EU . . . H 2 140.855 152.231 113.723 1 60.97 ? CAP 6EU 901 B 1 HETATM 32 C CAM 6EU . . . H 2 141.061 151.22 114.845 1 60.97 ? CAM 6EU 901 B 1 HETATM 33 C CAV 6EU . . . H 2 141.822 151.828 115.992 1 60.97 ? CAV 6EU 901 B 1 HETATM 34 C CBB 6EU . . . H 2 141.684 151.341 117.209 1 60.97 ? CBB 6EU 901 B 1 HETATM 35 C CBD 6EU . . . H 2 142.751 152.98 115.752 1 60.97 ? CBD 6EU 901 B 1 HETATM 36 O OAC 6EU . . . H 2 141.74 150.075 114.371 1 60.97 ? OAC 6EU 901 B 1 HETATM 37 C CAL 6EU . . . H 2 139.747 150.621 115.313 1 60.97 ? CAL 6EU 901 B 1 HETATM 38 O OAB 6EU . . . H 2 139.953 149.218 115.338 1 60.97 ? OAB 6EU 901 B 1 HETATM 39 C CAQ 6EU . . . H 2 140.806 149.022 114.221 1 60.97 ? CAQ 6EU 901 B 1 HETATM 40 C CAY 6EU . . . H 2 141.442 147.641 114.196 1 60.97 ? CAY 6EU 901 B 1 HETATM 41 C CBE 6EU . . . H 2 140.532 146.728 113.41 1 60.97 ? CBE 6EU 901 B 1 HETATM 42 C CBG 6EU . . . H 2 140.816 146.441 112.082 1 60.97 ? CBG 6EU 901 B 1 HETATM 43 C CBI 6EU . . . H 2 139.979 145.603 111.361 1 60.97 ? CBI 6EU 901 B 1 HETATM 44 C CBL 6EU . . . H 2 138.86 145.055 111.972 1 60.97 ? CBL 6EU 901 B 1 HETATM 45 C CBJ 6EU . . . H 2 138.574 145.338 113.299 1 60.97 ? CBJ 6EU 901 B 1 HETATM 46 C CBH 6EU . . . H 2 139.412 146.177 114.018 1 60.97 ? CBH 6EU 901 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 46 #