data_7L2U # _model_server_result.job_id QTnoGYQVZRpJArGBy6hYHQ _model_server_result.datetime_utc '2024-11-04 22:59:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l2u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":802}' # _entry.id 7L2U # _exptl.entry_id 7L2U _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 495.587 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7L2U _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L2U _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 J N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 3 F CYS 2 1_555 B SG CYS 17 F CYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 10 F CYS 9 1_555 B SG CYS 24 F CYS 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 B SG CYS 16 F CYS 15 1_555 B SG CYS 32 F CYS 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 B SG CYS 45 F CYS 44 1_555 B SG CYS 59 F CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 B SG CYS 52 F CYS 51 1_555 B SG CYS 64 F CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 58 F CYS 57 1_555 B SG CYS 72 F CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 C SG CYS 3 E CYS 2 1_555 C SG CYS 17 E CYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf8 C SG CYS 10 E CYS 9 1_555 C SG CYS 24 E CYS 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf9 C SG CYS 16 E CYS 15 1_555 C SG CYS 32 E CYS 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 C SG CYS 45 E CYS 44 1_555 C SG CYS 59 E CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf11 C SG CYS 52 E CYS 51 1_555 C SG CYS 64 E CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf12 C SG CYS 58 E CYS 57 1_555 C SG CYS 72 E CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A O GLY 516 A GLY 643 1_555 I NA NA . A NA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.168 ? metalc ? metalc2 I NA NA . A NA 803 1_555 E O GLY 516 C GLY 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.073 ? metalc ? metalc3 I NA NA . A NA 803 1_555 F O GLY 516 D GLY 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.193 ? # _chem_comp.formula 'C23 H46 N O8 P' _chem_comp.formula_weight 495.587 _chem_comp.id XKP _chem_comp.mon_nstd_flag . _chem_comp.name '(11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7L2U _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 XJ7 A 1 801 801 XJ7 6ER . H 4 XKP A 1 802 901 XKP NQT . I 5 NA A 1 803 1 NA NA . J 4 XKP F 1 901 901 XKP NQT . K 4 XKP F 1 902 901 XKP NQT . L 4 XKP E 1 901 901 XKP NQT . M 3 XJ7 B 1 801 801 XJ7 6ER . N 3 XJ7 C 1 801 801 XJ7 6ER . O 5 NA C 1 802 2 NA NA . P 3 XJ7 D 1 801 801 XJ7 6ER . Q 6 HOH A 1 1001 1001 HOH HOH . Q 6 HOH A 2 1002 1005 HOH HOH . R 6 HOH B 1 1001 1001 HOH HOH . R 6 HOH B 2 1002 1003 HOH HOH . S 6 HOH C 1 901 1004 HOH HOH . S 6 HOH C 2 902 1001 HOH HOH . S 6 HOH C 3 903 1002 HOH HOH . T 6 HOH D 1 901 1007 HOH HOH . T 6 HOH D 2 902 1001 HOH HOH . T 6 HOH D 3 903 1006 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 XKP . . . H 4 122.321 157.386 109.167 1 26.88 ? C11 XKP 802 A 1 HETATM 2 C C14 XKP . . . H 4 123.786 154.137 110.575 1 26.88 ? C14 XKP 802 A 1 HETATM 3 C C15 XKP . . . H 4 122.798 152.988 110.385 1 26.88 ? C15 XKP 802 A 1 HETATM 4 C C20 XKP . . . H 4 120.052 154.878 115.413 1 26.88 ? C20 XKP 802 A 1 HETATM 5 C C21 XKP . . . H 4 120.52 153.439 115.202 1 26.88 ? C21 XKP 802 A 1 HETATM 6 C C5 XKP . . . H 4 118.021 157.86 109.386 1 26.88 ? C5 XKP 802 A 1 HETATM 7 N N XKP . . . H 4 120.373 161.764 100.9 1 26.88 ? N XKP 802 A 1 HETATM 8 C C3 XKP . . . H 4 118.551 156.063 111.116 1 26.88 ? C3 XKP 802 A 1 HETATM 9 C C4 XKP . . . H 4 117.564 156.571 110.067 1 26.88 ? C4 XKP 802 A 1 HETATM 10 C C2 XKP . . . H 4 118.511 156.858 112.42 1 26.88 ? C2 XKP 802 A 1 HETATM 11 C C1 XKP . . . H 4 119.558 156.385 113.428 1 26.88 ? C1 XKP 802 A 1 HETATM 12 C C XKP . . . H 4 119.018 155.318 114.377 1 26.88 ? C XKP 802 A 1 HETATM 13 C C6 XKP . . . H 4 119.588 157.338 107.705 1 26.88 ? C6 XKP 802 A 1 HETATM 14 C C7 XKP . . . H 4 120.662 158.42 107.843 1 26.88 ? C7 XKP 802 A 1 HETATM 15 C C19 XKP . . . H 4 124.385 149.722 111.787 1 26.88 ? C19 XKP 802 A 1 HETATM 16 C C18 XKP . . . H 4 123.828 151.141 111.769 1 26.88 ? C18 XKP 802 A 1 HETATM 17 C C17 XKP . . . H 4 124.961 149.347 113.15 1 26.88 ? C17 XKP 802 A 1 HETATM 18 C C9 XKP . . . H 4 119.403 159.85 102.069 1 26.88 ? C9 XKP 802 A 1 HETATM 19 C C8 XKP . . . H 4 120.603 159.355 106.636 1 26.88 ? C8 XKP 802 A 1 HETATM 20 C C16 XKP . . . H 4 123.494 151.628 110.362 1 26.88 ? C16 XKP 802 A 1 HETATM 21 O O1 XKP . . . H 4 118.337 157.879 108.022 1 26.88 ? O1 XKP 802 A 1 HETATM 22 C C10 XKP . . . H 4 119.183 161.276 101.572 1 26.88 ? C10 XKP 802 A 1 HETATM 23 C C12 XKP . . . H 4 122.327 155.887 109.463 1 26.88 ? C12 XKP 802 A 1 HETATM 24 O O XKP . . . H 4 118.109 158.858 110.017 1 26.88 ? O XKP 802 A 1 HETATM 25 C C13 XKP . . . H 4 123.114 155.501 110.713 1 26.88 ? C13 XKP 802 A 1 HETATM 26 C C22 XKP . . . H 4 123.931 149.423 114.275 1 26.88 ? C22 XKP 802 A 1 HETATM 27 O O2 XKP . . . H 4 120.929 158.632 105.481 1 26.88 ? O2 XKP 802 A 1 HETATM 28 O O3 XKP . . . H 4 118.444 158.247 104.887 1 26.88 ? O3 XKP 802 A 1 HETATM 29 O O4 XKP . . . H 4 120.165 157.365 103.364 1 26.88 ? O4 XKP 802 A 1 HETATM 30 O O5 XKP . . . H 4 119.763 159.907 103.419 1 26.88 ? O5 XKP 802 A 1 HETATM 31 O O6 XKP . . . H 4 121.932 157.834 107.9 1 26.88 ? O6 XKP 802 A 1 HETATM 32 O O7 XKP . . . H 4 122.64 158.166 109.998 1 26.88 ? O7 XKP 802 A 1 HETATM 33 P P XKP . . . H 4 119.803 158.506 104.283 1 26.88 ? P XKP 802 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #