data_7L2X
#
_model_server_result.job_id            XPZO3GgVJKmuMOje2ci-IA 
_model_server_result.datetime_utc      '2024-11-04 22:57:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7l2x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":902}' 
#
_entry.id    7L2X 
#
_exptl.entry_id    7L2X 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              565.72 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(10R,13S)-16-amino-13-hydroxy-7,13-dioxo-8,12,14-trioxa-13lambda~5~-phosphahexadecan-10-yl hexadecanoate' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7L2X 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7L2X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 I N N 
? 3 L N N 
#
_chem_comp.formula           'C28 H56 N O8 P' 
_chem_comp.formula_weight    565.72 
_chem_comp.id                6IY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(10R,13S)-16-amino-13-hydroxy-7,13-dioxo-8,12,14-trioxa-13lambda~5~-phosphahexadecan-10-yl hexadecanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C12 6IY sing 93 n n 
C12 C11 6IY sing 94 n n 
C11 O5 6IY sing 95 n n 
O5 P 6IY sing 96 n n 
P O3 6IY doub 97 n n 
P O2 6IY sing 98 n n 
P O4 6IY sing 99 n n 
O2 C10 6IY sing 100 n n 
C10 C9 6IY sing 101 n n 
C9 C8 6IY sing 102 n n 
C9 O6 6IY sing 103 n n 
C8 O1 6IY sing 104 n n 
O6 C13 6IY sing 105 n n 
O7 C13 6IY doub 106 n n 
O1 C7 6IY sing 107 n n 
C13 C14 6IY sing 108 n n 
O C7 6IY doub 109 n n 
C7 C6 6IY sing 110 n n 
C14 C15 6IY sing 111 n n 
C15 C16 6IY sing 112 n n 
C6 C5 6IY sing 113 n n 
C5 C4 6IY sing 114 n n 
C16 C17 6IY sing 115 n n 
C17 C18 6IY sing 116 n n 
C4 C3 6IY sing 117 n n 
C18 C19 6IY sing 118 n n 
C20 C19 6IY sing 119 n n 
C20 C21 6IY sing 120 n n 
C22 C23 6IY sing 121 n n 
C22 C21 6IY sing 122 n n 
C23 C24 6IY sing 123 n n 
C3 C2 6IY sing 124 n n 
C24 C25 6IY sing 125 n n 
C2 C1 6IY sing 126 n n 
C25 C26 6IY sing 127 n n 
C26 C27 6IY sing 128 n n 
C27 C28 6IY sing 129 n n 
N H1 6IY sing 130 n n 
N H2 6IY sing 131 n n 
C1 H4 6IY sing 132 n n 
C1 H5 6IY sing 133 n n 
C1 H6 6IY sing 134 n n 
C10 H7 6IY sing 135 n n 
C10 H8 6IY sing 136 n n 
C11 H9 6IY sing 137 n n 
C11 H10 6IY sing 138 n n 
C12 H11 6IY sing 139 n n 
C12 H12 6IY sing 140 n n 
C14 H13 6IY sing 141 n n 
C14 H14 6IY sing 142 n n 
C15 H15 6IY sing 143 n n 
C15 H16 6IY sing 144 n n 
C16 H17 6IY sing 145 n n 
C16 H18 6IY sing 146 n n 
C17 H19 6IY sing 147 n n 
C17 H20 6IY sing 148 n n 
C18 H21 6IY sing 149 n n 
C18 H22 6IY sing 150 n n 
C19 H23 6IY sing 151 n n 
C19 H24 6IY sing 152 n n 
C2 H25 6IY sing 153 n n 
C2 H26 6IY sing 154 n n 
C20 H27 6IY sing 155 n n 
C20 H28 6IY sing 156 n n 
C21 H29 6IY sing 157 n n 
C21 H30 6IY sing 158 n n 
C22 H31 6IY sing 159 n n 
C22 H32 6IY sing 160 n n 
C23 H33 6IY sing 161 n n 
C23 H34 6IY sing 162 n n 
C24 H35 6IY sing 163 n n 
C24 H36 6IY sing 164 n n 
C25 H37 6IY sing 165 n n 
C25 H38 6IY sing 166 n n 
C26 H39 6IY sing 167 n n 
C26 H40 6IY sing 168 n n 
C27 H41 6IY sing 169 n n 
C27 H42 6IY sing 170 n n 
C28 H43 6IY sing 171 n n 
C28 H44 6IY sing 172 n n 
C28 H45 6IY sing 173 n n 
C3 H46 6IY sing 174 n n 
C3 H47 6IY sing 175 n n 
C4 H48 6IY sing 176 n n 
C4 H49 6IY sing 177 n n 
C5 H50 6IY sing 178 n n 
C5 H51 6IY sing 179 n n 
C6 H52 6IY sing 180 n n 
C6 H53 6IY sing 181 n n 
C8 H54 6IY sing 182 n n 
C8 H55 6IY sing 183 n n 
C9 H56 6IY sing 184 n n 
O4 H57 6IY sing 185 n n 
#
_atom_sites.entry_id                     7L2X 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 6EU A 1 901 901 6EU 6EU . 
F 3 6IY A 1 902 1001 6IY 6IY . 
G 3 6IY A 1 903 1001 6IY 6IY . 
H 2 6EU D 1 901 901 6EU 6EU . 
I 3 6IY D 1 902 1001 6IY 6IY . 
J 4 XPJ D 1 903 1 XPJ 656 . 
K 2 6EU B 1 901 901 6EU 6EU . 
L 3 6IY B 1 902 1001 6IY 6IY . 
M 2 6EU C 1 901 901 6EU 6EU . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N 6IY . . . I 3 117.875 121.904 94.529 1 71.66 ? N 6IY 902 D 1 
HETATM 2 O O 6IY . . . I 3 118.331 115.969 103.792 1 71.66 ? O 6IY 902 D 1 
HETATM 3 C C1 6IY . . . I 3 118.34 117.988 110.196 1 71.66 ? C1 6IY 902 D 1 
HETATM 4 C C10 6IY . . . I 3 116.498 118.569 99.673 1 71.66 ? C10 6IY 902 D 1 
HETATM 5 C C11 6IY . . . I 3 117.045 121.834 96.77 1 71.66 ? C11 6IY 902 D 1 
HETATM 6 C C12 6IY . . . I 3 118.024 122.518 95.83 1 71.66 ? C12 6IY 902 D 1 
HETATM 7 C C13 6IY . . . I 3 118.445 120.439 101.013 1 71.66 ? C13 6IY 902 D 1 
HETATM 8 C C14 6IY . . . I 3 117.903 121.199 102.222 1 71.66 ? C14 6IY 902 D 1 
HETATM 9 C C15 6IY . . . I 3 118.705 120.997 103.506 1 71.66 ? C15 6IY 902 D 1 
HETATM 10 C C16 6IY . . . I 3 117.805 121.314 104.702 1 71.66 ? C16 6IY 902 D 1 
HETATM 11 C C17 6IY . . . I 3 118.642 121.824 105.869 1 71.66 ? C17 6IY 902 D 1 
HETATM 12 C C18 6IY . . . I 3 117.808 121.876 107.141 1 71.66 ? C18 6IY 902 D 1 
HETATM 13 C C19 6IY . . . I 3 118.595 122.622 108.208 1 71.66 ? C19 6IY 902 D 1 
HETATM 14 C C2 6IY . . . I 3 118.572 117.773 108.706 1 71.66 ? C2 6IY 902 D 1 
HETATM 15 C C20 6IY . . . I 3 118.016 122.33 109.587 1 71.66 ? C20 6IY 902 D 1 
HETATM 16 C C21 6IY . . . I 3 119.028 122.765 110.625 1 71.66 ? C21 6IY 902 D 1 
HETATM 17 C C22 6IY . . . I 3 118.547 122.484 112.043 1 71.66 ? C22 6IY 902 D 1 
HETATM 18 C C23 6IY . . . I 3 119.805 122.489 112.885 1 71.66 ? C23 6IY 902 D 1 
HETATM 19 C C24 6IY . . . I 3 119.578 122.764 114.364 1 71.66 ? C24 6IY 902 D 1 
HETATM 20 C C25 6IY . . . I 3 120.769 123.597 114.846 1 71.66 ? C25 6IY 902 D 1 
HETATM 21 C C26 6IY . . . I 3 120.872 123.578 116.363 1 71.66 ? C26 6IY 902 D 1 
HETATM 22 C C27 6IY . . . I 3 122.128 124.289 116.851 1 71.66 ? C27 6IY 902 D 1 
HETATM 23 C C28 6IY . . . I 3 122.026 125.803 116.75 1 71.66 ? C28 6IY 902 D 1 
HETATM 24 C C3 6IY . . . I 3 117.419 117.004 108.067 1 71.66 ? C3 6IY 902 D 1 
HETATM 25 C C4 6IY . . . I 3 117.788 116.58 106.648 1 71.66 ? C4 6IY 902 D 1 
HETATM 26 C C5 6IY . . . I 3 117.769 117.775 105.699 1 71.66 ? C5 6IY 902 D 1 
HETATM 27 C C6 6IY . . . I 3 116.793 117.567 104.544 1 71.66 ? C6 6IY 902 D 1 
HETATM 28 C C7 6IY . . . I 3 117.38 116.608 103.522 1 71.66 ? C7 6IY 902 D 1 
HETATM 29 C C8 6IY . . . I 3 117.544 116.89 101.192 1 71.66 ? C8 6IY 902 D 1 
HETATM 30 C C9 6IY . . . I 3 117.278 118.372 100.973 1 71.66 ? C9 6IY 902 D 1 
HETATM 31 O O1 6IY . . . I 3 116.773 116.471 102.276 1 71.66 ? O1 6IY 902 D 1 
HETATM 32 O O2 6IY . . . I 3 117.304 118.346 98.561 1 71.66 ? O2 6IY 902 D 1 
HETATM 33 O O3 6IY . . . I 3 117.394 118.52 96.007 1 71.66 ? O3 6IY 902 D 1 
HETATM 34 O O4 6IY . . . I 3 115.526 119.305 96.983 1 71.66 ? O4 6IY 902 D 1 
HETATM 35 O O5 6IY . . . I 3 117.676 120.705 97.295 1 71.66 ? O5 6IY 902 D 1 
HETATM 36 O O6 6IY . . . I 3 118.506 119.045 100.967 1 71.66 ? O6 6IY 902 D 1 
HETATM 37 O O7 6IY . . . I 3 118.815 121.052 100.075 1 71.66 ? O7 6IY 902 D 1 
HETATM 38 P P 6IY . . . I 3 116.964 119.225 97.21 1 71.66 ? P 6IY 902 D 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           38 
#