data_7L39 # _model_server_result.job_id 5qjjt0khdDBQtsiX0QXZXA _model_server_result.datetime_utc '2024-11-17 05:46:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l39 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7L39 # _exptl.entry_id 7L39 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7L39 _cell.length_a 61.016 _cell.length_b 61.016 _cell.length_c 98.051 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L39 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 7L39 _atom_sites.fract_transf_matrix[1][1] 0.016389 _atom_sites.fract_transf_matrix[1][2] 0.009462 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018924 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 201 1 TRS TRS . C 3 CL A 1 202 1 CL CL . D 4 MBN A 1 203 1 MBN MBN . E 5 BME A 1 204 1 BME BME . F 6 HOH A 1 301 45 HOH HOH . F 6 HOH A 2 302 60 HOH HOH . F 6 HOH A 3 303 34 HOH HOH . F 6 HOH A 4 304 38 HOH HOH . F 6 HOH A 5 305 84 HOH HOH . F 6 HOH A 6 306 76 HOH HOH . F 6 HOH A 7 307 39 HOH HOH . F 6 HOH A 8 308 77 HOH HOH . F 6 HOH A 9 309 59 HOH HOH . F 6 HOH A 10 310 78 HOH HOH . F 6 HOH A 11 311 32 HOH HOH . F 6 HOH A 12 312 16 HOH HOH . F 6 HOH A 13 313 83 HOH HOH . F 6 HOH A 14 314 11 HOH HOH . F 6 HOH A 15 315 58 HOH HOH . F 6 HOH A 16 316 20 HOH HOH . F 6 HOH A 17 317 18 HOH HOH . F 6 HOH A 18 318 23 HOH HOH . F 6 HOH A 19 319 43 HOH HOH . F 6 HOH A 20 320 8 HOH HOH . F 6 HOH A 21 321 9 HOH HOH . F 6 HOH A 22 322 35 HOH HOH . F 6 HOH A 23 323 41 HOH HOH . F 6 HOH A 24 324 2 HOH HOH . F 6 HOH A 25 325 27 HOH HOH . F 6 HOH A 26 326 64 HOH HOH . F 6 HOH A 27 327 93 HOH HOH . F 6 HOH A 28 328 6 HOH HOH . F 6 HOH A 29 329 31 HOH HOH . F 6 HOH A 30 330 62 HOH HOH . F 6 HOH A 31 331 24 HOH HOH . F 6 HOH A 32 332 13 HOH HOH . F 6 HOH A 33 333 86 HOH HOH . F 6 HOH A 34 334 82 HOH HOH . F 6 HOH A 35 335 7 HOH HOH . F 6 HOH A 36 336 4 HOH HOH . F 6 HOH A 37 337 5 HOH HOH . F 6 HOH A 38 338 30 HOH HOH . F 6 HOH A 39 339 53 HOH HOH . F 6 HOH A 40 340 36 HOH HOH . F 6 HOH A 41 341 19 HOH HOH . F 6 HOH A 42 342 40 HOH HOH . F 6 HOH A 43 343 3 HOH HOH . F 6 HOH A 44 344 90 HOH HOH . F 6 HOH A 45 345 29 HOH HOH . F 6 HOH A 46 346 26 HOH HOH . F 6 HOH A 47 347 21 HOH HOH . F 6 HOH A 48 348 50 HOH HOH . F 6 HOH A 49 349 51 HOH HOH . F 6 HOH A 50 350 42 HOH HOH . F 6 HOH A 51 351 25 HOH HOH . F 6 HOH A 52 352 14 HOH HOH . F 6 HOH A 53 353 44 HOH HOH . F 6 HOH A 54 354 28 HOH HOH . F 6 HOH A 55 355 74 HOH HOH . F 6 HOH A 56 356 92 HOH HOH . F 6 HOH A 57 357 52 HOH HOH . F 6 HOH A 58 358 79 HOH HOH . F 6 HOH A 59 359 69 HOH HOH . F 6 HOH A 60 360 12 HOH HOH . F 6 HOH A 61 361 57 HOH HOH . F 6 HOH A 62 362 15 HOH HOH . F 6 HOH A 63 363 87 HOH HOH . F 6 HOH A 64 364 17 HOH HOH . F 6 HOH A 65 365 46 HOH HOH . F 6 HOH A 66 366 10 HOH HOH . F 6 HOH A 67 367 37 HOH HOH . F 6 HOH A 68 368 85 HOH HOH . F 6 HOH A 69 369 80 HOH HOH . F 6 HOH A 70 370 55 HOH HOH . F 6 HOH A 71 371 71 HOH HOH . F 6 HOH A 72 372 48 HOH HOH . F 6 HOH A 73 373 33 HOH HOH . F 6 HOH A 74 374 54 HOH HOH . F 6 HOH A 75 375 66 HOH HOH . F 6 HOH A 76 376 68 HOH HOH . F 6 HOH A 77 377 61 HOH HOH . F 6 HOH A 78 378 22 HOH HOH . F 6 HOH A 79 379 75 HOH HOH . F 6 HOH A 80 380 88 HOH HOH . F 6 HOH A 81 381 67 HOH HOH . F 6 HOH A 82 382 81 HOH HOH . F 6 HOH A 83 383 56 HOH HOH . F 6 HOH A 84 384 70 HOH HOH . F 6 HOH A 85 385 73 HOH HOH . F 6 HOH A 86 386 89 HOH HOH . F 6 HOH A 87 387 91 HOH HOH . F 6 HOH A 88 388 47 HOH HOH . F 6 HOH A 89 389 72 HOH HOH . F 6 HOH A 90 390 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . E 5 -28.195 0.653 22.593 0.8 40.71 ? C1 BME 204 A 1 HETATM 2 C C2 BME . . . E 5 -27.723 0.234 21.212 0.8 42.97 ? C2 BME 204 A 1 HETATM 3 O O1 BME . . . E 5 -29.012 1.778 22.438 0.8 40.14 ? O1 BME 204 A 1 HETATM 4 S S2 BME . . . E 5 -26.832 1.643 20.534 0.8 47.48 ? S2 BME 204 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 4 #