data_7L3D # _model_server_result.job_id HmkbsWB5cazTaRwMwAngdw _model_server_result.datetime_utc '2024-11-28 05:01:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l3d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7L3D # _exptl.entry_id 7L3D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7L3D _cell.length_a 61.13 _cell.length_b 61.13 _cell.length_c 97.749 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L3D _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 7L3D _atom_sites.fract_transf_matrix[1][1] 0.016358 _atom_sites.fract_transf_matrix[1][2] 0.009445 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018889 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01023 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 201 1 TRS TRS . C 3 BME A 1 202 1 BME BME . D 3 BME A 1 203 2 BME BME . E 4 CL A 1 204 1 CL CL . F 5 XQJ A 1 205 1 XQJ LIG . G 6 HOH A 1 301 57 HOH HOH . G 6 HOH A 2 302 50 HOH HOH . G 6 HOH A 3 303 27 HOH HOH . G 6 HOH A 4 304 84 HOH HOH . G 6 HOH A 5 305 83 HOH HOH . G 6 HOH A 6 306 43 HOH HOH . G 6 HOH A 7 307 71 HOH HOH . G 6 HOH A 8 308 59 HOH HOH . G 6 HOH A 9 309 70 HOH HOH . G 6 HOH A 10 310 31 HOH HOH . G 6 HOH A 11 311 8 HOH HOH . G 6 HOH A 12 312 15 HOH HOH . G 6 HOH A 13 313 1 HOH HOH . G 6 HOH A 14 314 82 HOH HOH . G 6 HOH A 15 315 21 HOH HOH . G 6 HOH A 16 316 47 HOH HOH . G 6 HOH A 17 317 89 HOH HOH . G 6 HOH A 18 318 7 HOH HOH . G 6 HOH A 19 319 38 HOH HOH . G 6 HOH A 20 320 23 HOH HOH . G 6 HOH A 21 321 16 HOH HOH . G 6 HOH A 22 322 26 HOH HOH . G 6 HOH A 23 323 24 HOH HOH . G 6 HOH A 24 324 77 HOH HOH . G 6 HOH A 25 325 9 HOH HOH . G 6 HOH A 26 326 13 HOH HOH . G 6 HOH A 27 327 93 HOH HOH . G 6 HOH A 28 328 35 HOH HOH . G 6 HOH A 29 329 2 HOH HOH . G 6 HOH A 30 330 78 HOH HOH . G 6 HOH A 31 331 61 HOH HOH . G 6 HOH A 32 332 86 HOH HOH . G 6 HOH A 33 333 96 HOH HOH . G 6 HOH A 34 334 99 HOH HOH . G 6 HOH A 35 335 5 HOH HOH . G 6 HOH A 36 336 74 HOH HOH . G 6 HOH A 37 337 87 HOH HOH . G 6 HOH A 38 338 46 HOH HOH . G 6 HOH A 39 339 4 HOH HOH . G 6 HOH A 40 340 63 HOH HOH . G 6 HOH A 41 341 6 HOH HOH . G 6 HOH A 42 342 25 HOH HOH . G 6 HOH A 43 343 85 HOH HOH . G 6 HOH A 44 344 65 HOH HOH . G 6 HOH A 45 345 14 HOH HOH . G 6 HOH A 46 346 22 HOH HOH . G 6 HOH A 47 347 48 HOH HOH . G 6 HOH A 48 348 28 HOH HOH . G 6 HOH A 49 349 32 HOH HOH . G 6 HOH A 50 350 3 HOH HOH . G 6 HOH A 51 351 54 HOH HOH . G 6 HOH A 52 352 42 HOH HOH . G 6 HOH A 53 353 44 HOH HOH . G 6 HOH A 54 354 102 HOH HOH . G 6 HOH A 55 355 49 HOH HOH . G 6 HOH A 56 356 97 HOH HOH . G 6 HOH A 57 357 100 HOH HOH . G 6 HOH A 58 358 98 HOH HOH . G 6 HOH A 59 359 39 HOH HOH . G 6 HOH A 60 360 29 HOH HOH . G 6 HOH A 61 361 55 HOH HOH . G 6 HOH A 62 362 66 HOH HOH . G 6 HOH A 63 363 51 HOH HOH . G 6 HOH A 64 364 36 HOH HOH . G 6 HOH A 65 365 20 HOH HOH . G 6 HOH A 66 366 79 HOH HOH . G 6 HOH A 67 367 11 HOH HOH . G 6 HOH A 68 368 37 HOH HOH . G 6 HOH A 69 369 64 HOH HOH . G 6 HOH A 70 370 18 HOH HOH . G 6 HOH A 71 371 69 HOH HOH . G 6 HOH A 72 372 10 HOH HOH . G 6 HOH A 73 373 62 HOH HOH . G 6 HOH A 74 374 12 HOH HOH . G 6 HOH A 75 375 45 HOH HOH . G 6 HOH A 76 376 17 HOH HOH . G 6 HOH A 77 377 80 HOH HOH . G 6 HOH A 78 378 67 HOH HOH . G 6 HOH A 79 379 92 HOH HOH . G 6 HOH A 80 380 52 HOH HOH . G 6 HOH A 81 381 33 HOH HOH . G 6 HOH A 82 382 90 HOH HOH . G 6 HOH A 83 383 40 HOH HOH . G 6 HOH A 84 384 41 HOH HOH . G 6 HOH A 85 385 30 HOH HOH . G 6 HOH A 86 386 73 HOH HOH . G 6 HOH A 87 387 34 HOH HOH . G 6 HOH A 88 388 72 HOH HOH . G 6 HOH A 89 389 60 HOH HOH . G 6 HOH A 90 390 101 HOH HOH . G 6 HOH A 91 391 91 HOH HOH . G 6 HOH A 92 392 95 HOH HOH . G 6 HOH A 93 393 76 HOH HOH . G 6 HOH A 94 394 81 HOH HOH . G 6 HOH A 95 395 75 HOH HOH . G 6 HOH A 96 396 19 HOH HOH . G 6 HOH A 97 397 53 HOH HOH . G 6 HOH A 98 398 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 3 28.225 -1.086 22.774 0.83 44.66 ? C1 BME 203 A 1 HETATM 2 C C2 BME . . . D 3 27.628 -0.241 21.667 0.83 45.63 ? C2 BME 203 A 1 HETATM 3 O O1 BME . . . D 3 29.357 -1.716 22.247 0.83 42.97 ? O1 BME 203 A 1 HETATM 4 S S2 BME . . . D 3 27.144 -1.4 20.376 0.83 45.73 ? S2 BME 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #