data_7L3E # _model_server_result.job_id bybfmZV1o8nF1k_wKpC4Vw _model_server_result.datetime_utc '2024-11-24 12:46:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l3e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7L3E # _exptl.entry_id 7L3E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 218.035 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-iodo-3-methylbenzene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7L3E _cell.length_a 60.162 _cell.length_b 60.162 _cell.length_c 96.296 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L3E _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H7 I' _chem_comp.formula_weight 218.035 _chem_comp.id XQJ _chem_comp.mon_nstd_flag . _chem_comp.name 1-iodo-3-methylbenzene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-iodotoluene # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 XQJ sing 404 n n C02 C08 XQJ doub 405 n y C02 C03 XQJ sing 406 n y C08 C06 XQJ sing 407 n y C03 C04 XQJ doub 408 n y C06 I07 XQJ sing 409 n n C06 C05 XQJ doub 410 n y C04 C05 XQJ sing 411 n y C01 H1 XQJ sing 412 n n C01 H2 XQJ sing 413 n n C01 H3 XQJ sing 414 n n C03 H4 XQJ sing 415 n n C04 H5 XQJ sing 416 n n C05 H6 XQJ sing 417 n n C08 H7 XQJ sing 418 n n # _atom_sites.entry_id 7L3E _atom_sites.fract_transf_matrix[1][1] 0.016622 _atom_sites.fract_transf_matrix[1][2] 0.009597 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019193 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010385 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 201 1 TRS TRS . C 3 BME A 1 202 2 BME BME . D 4 CL A 1 203 1 CL CL . E 5 XQJ A 1 204 1 XQJ LIG . F 6 HOH A 1 301 104 HOH HOH . F 6 HOH A 2 302 187 HOH HOH . F 6 HOH A 3 303 190 HOH HOH . F 6 HOH A 4 304 142 HOH HOH . F 6 HOH A 5 305 180 HOH HOH . F 6 HOH A 6 306 229 HOH HOH . F 6 HOH A 7 307 140 HOH HOH . F 6 HOH A 8 308 199 HOH HOH . F 6 HOH A 9 309 105 HOH HOH . F 6 HOH A 10 310 27 HOH HOH . F 6 HOH A 11 311 185 HOH HOH . F 6 HOH A 12 312 200 HOH HOH . F 6 HOH A 13 313 21 HOH HOH . F 6 HOH A 14 314 175 HOH HOH . F 6 HOH A 15 315 102 HOH HOH . F 6 HOH A 16 316 92 HOH HOH . F 6 HOH A 17 317 113 HOH HOH . F 6 HOH A 18 318 219 HOH HOH . F 6 HOH A 19 319 110 HOH HOH . F 6 HOH A 20 320 217 HOH HOH . F 6 HOH A 21 321 58 HOH HOH . F 6 HOH A 22 322 54 HOH HOH . F 6 HOH A 23 323 207 HOH HOH . F 6 HOH A 24 324 160 HOH HOH . F 6 HOH A 25 325 204 HOH HOH . F 6 HOH A 26 326 31 HOH HOH . F 6 HOH A 27 327 38 HOH HOH . F 6 HOH A 28 328 52 HOH HOH . F 6 HOH A 29 329 138 HOH HOH . F 6 HOH A 30 330 112 HOH HOH . F 6 HOH A 31 331 211 HOH HOH . F 6 HOH A 32 332 66 HOH HOH . F 6 HOH A 33 333 15 HOH HOH . F 6 HOH A 34 334 73 HOH HOH . F 6 HOH A 35 335 12 HOH HOH . F 6 HOH A 36 336 116 HOH HOH . F 6 HOH A 37 337 108 HOH HOH . F 6 HOH A 38 338 182 HOH HOH . F 6 HOH A 39 339 61 HOH HOH . F 6 HOH A 40 340 19 HOH HOH . F 6 HOH A 41 341 32 HOH HOH . F 6 HOH A 42 342 151 HOH HOH . F 6 HOH A 43 343 68 HOH HOH . F 6 HOH A 44 344 25 HOH HOH . F 6 HOH A 45 345 26 HOH HOH . F 6 HOH A 46 346 154 HOH HOH . F 6 HOH A 47 347 17 HOH HOH . F 6 HOH A 48 348 40 HOH HOH . F 6 HOH A 49 349 79 HOH HOH . F 6 HOH A 50 350 122 HOH HOH . F 6 HOH A 51 351 133 HOH HOH . F 6 HOH A 52 352 36 HOH HOH . F 6 HOH A 53 353 98 HOH HOH . F 6 HOH A 54 354 221 HOH HOH . F 6 HOH A 55 355 11 HOH HOH . F 6 HOH A 56 356 63 HOH HOH . F 6 HOH A 57 357 5 HOH HOH . F 6 HOH A 58 358 117 HOH HOH . F 6 HOH A 59 359 45 HOH HOH . F 6 HOH A 60 360 106 HOH HOH . F 6 HOH A 61 361 2 HOH HOH . F 6 HOH A 62 362 47 HOH HOH . F 6 HOH A 63 363 44 HOH HOH . F 6 HOH A 64 364 49 HOH HOH . F 6 HOH A 65 365 93 HOH HOH . F 6 HOH A 66 366 103 HOH HOH . F 6 HOH A 67 367 149 HOH HOH . F 6 HOH A 68 368 162 HOH HOH . F 6 HOH A 69 369 111 HOH HOH . F 6 HOH A 70 370 56 HOH HOH . F 6 HOH A 71 371 202 HOH HOH . F 6 HOH A 72 372 94 HOH HOH . F 6 HOH A 73 373 224 HOH HOH . F 6 HOH A 74 374 13 HOH HOH . F 6 HOH A 75 375 8 HOH HOH . F 6 HOH A 76 376 39 HOH HOH . F 6 HOH A 77 377 114 HOH HOH . F 6 HOH A 78 378 67 HOH HOH . F 6 HOH A 79 379 37 HOH HOH . F 6 HOH A 80 380 43 HOH HOH . F 6 HOH A 81 381 16 HOH HOH . F 6 HOH A 82 382 120 HOH HOH . F 6 HOH A 83 383 55 HOH HOH . F 6 HOH A 84 384 100 HOH HOH . F 6 HOH A 85 385 173 HOH HOH . F 6 HOH A 86 386 65 HOH HOH . F 6 HOH A 87 387 96 HOH HOH . F 6 HOH A 88 388 24 HOH HOH . F 6 HOH A 89 389 76 HOH HOH . F 6 HOH A 90 390 30 HOH HOH . F 6 HOH A 91 391 145 HOH HOH . F 6 HOH A 92 392 127 HOH HOH . F 6 HOH A 93 393 82 HOH HOH . F 6 HOH A 94 394 20 HOH HOH . F 6 HOH A 95 395 99 HOH HOH . F 6 HOH A 96 396 3 HOH HOH . F 6 HOH A 97 397 172 HOH HOH . F 6 HOH A 98 398 156 HOH HOH . F 6 HOH A 99 399 35 HOH HOH . F 6 HOH A 100 400 41 HOH HOH . F 6 HOH A 101 401 141 HOH HOH . F 6 HOH A 102 402 89 HOH HOH . F 6 HOH A 103 403 136 HOH HOH . F 6 HOH A 104 404 134 HOH HOH . F 6 HOH A 105 405 72 HOH HOH . F 6 HOH A 106 406 71 HOH HOH . F 6 HOH A 107 407 7 HOH HOH . F 6 HOH A 108 408 9 HOH HOH . F 6 HOH A 109 409 14 HOH HOH . F 6 HOH A 110 410 57 HOH HOH . F 6 HOH A 111 411 129 HOH HOH . F 6 HOH A 112 412 181 HOH HOH . F 6 HOH A 113 413 59 HOH HOH . F 6 HOH A 114 414 33 HOH HOH . F 6 HOH A 115 415 228 HOH HOH . F 6 HOH A 116 416 74 HOH HOH . F 6 HOH A 117 417 210 HOH HOH . F 6 HOH A 118 418 46 HOH HOH . F 6 HOH A 119 419 10 HOH HOH . F 6 HOH A 120 420 22 HOH HOH . F 6 HOH A 121 421 132 HOH HOH . F 6 HOH A 122 422 97 HOH HOH . F 6 HOH A 123 423 48 HOH HOH . F 6 HOH A 124 424 123 HOH HOH . F 6 HOH A 125 425 107 HOH HOH . F 6 HOH A 126 426 18 HOH HOH . F 6 HOH A 127 427 80 HOH HOH . F 6 HOH A 128 428 70 HOH HOH . F 6 HOH A 129 429 75 HOH HOH . F 6 HOH A 130 430 78 HOH HOH . F 6 HOH A 131 431 6 HOH HOH . F 6 HOH A 132 432 131 HOH HOH . F 6 HOH A 133 433 28 HOH HOH . F 6 HOH A 134 434 53 HOH HOH . F 6 HOH A 135 435 147 HOH HOH . F 6 HOH A 136 436 135 HOH HOH . F 6 HOH A 137 437 84 HOH HOH . F 6 HOH A 138 438 205 HOH HOH . F 6 HOH A 139 439 169 HOH HOH . F 6 HOH A 140 440 148 HOH HOH . F 6 HOH A 141 441 64 HOH HOH . F 6 HOH A 142 442 81 HOH HOH . F 6 HOH A 143 443 130 HOH HOH . F 6 HOH A 144 444 198 HOH HOH . F 6 HOH A 145 445 101 HOH HOH . F 6 HOH A 146 446 23 HOH HOH . F 6 HOH A 147 447 109 HOH HOH . F 6 HOH A 148 448 42 HOH HOH . F 6 HOH A 149 449 29 HOH HOH . F 6 HOH A 150 450 184 HOH HOH . F 6 HOH A 151 451 201 HOH HOH . F 6 HOH A 152 452 225 HOH HOH . F 6 HOH A 153 453 178 HOH HOH . F 6 HOH A 154 454 51 HOH HOH . F 6 HOH A 155 455 183 HOH HOH . F 6 HOH A 156 456 209 HOH HOH . F 6 HOH A 157 457 91 HOH HOH . F 6 HOH A 158 458 208 HOH HOH . F 6 HOH A 159 459 179 HOH HOH . F 6 HOH A 160 460 220 HOH HOH . F 6 HOH A 161 461 177 HOH HOH . F 6 HOH A 162 462 203 HOH HOH . F 6 HOH A 163 463 226 HOH HOH . F 6 HOH A 164 464 124 HOH HOH . F 6 HOH A 165 465 186 HOH HOH . F 6 HOH A 166 466 194 HOH HOH . F 6 HOH A 167 467 232 HOH HOH . F 6 HOH A 168 468 1 HOH HOH . F 6 HOH A 169 469 197 HOH HOH . F 6 HOH A 170 470 50 HOH HOH . F 6 HOH A 171 471 214 HOH HOH . F 6 HOH A 172 472 188 HOH HOH . F 6 HOH A 173 473 213 HOH HOH . F 6 HOH A 174 474 60 HOH HOH . F 6 HOH A 175 475 189 HOH HOH . F 6 HOH A 176 476 126 HOH HOH . F 6 HOH A 177 477 144 HOH HOH . F 6 HOH A 178 478 195 HOH HOH . F 6 HOH A 179 479 215 HOH HOH . F 6 HOH A 180 480 216 HOH HOH . F 6 HOH A 181 481 174 HOH HOH . F 6 HOH A 182 482 118 HOH HOH . F 6 HOH A 183 483 168 HOH HOH . F 6 HOH A 184 484 115 HOH HOH . F 6 HOH A 185 485 230 HOH HOH . F 6 HOH A 186 486 139 HOH HOH . F 6 HOH A 187 487 152 HOH HOH . F 6 HOH A 188 488 206 HOH HOH . F 6 HOH A 189 489 191 HOH HOH . F 6 HOH A 190 490 87 HOH HOH . F 6 HOH A 191 491 150 HOH HOH . F 6 HOH A 192 492 164 HOH HOH . F 6 HOH A 193 493 85 HOH HOH . F 6 HOH A 194 494 171 HOH HOH . F 6 HOH A 195 495 161 HOH HOH . F 6 HOH A 196 496 231 HOH HOH . F 6 HOH A 197 497 222 HOH HOH . F 6 HOH A 198 498 196 HOH HOH . F 6 HOH A 199 499 125 HOH HOH . F 6 HOH A 200 500 155 HOH HOH . F 6 HOH A 201 501 121 HOH HOH . F 6 HOH A 202 502 193 HOH HOH . F 6 HOH A 203 503 192 HOH HOH . F 6 HOH A 204 504 95 HOH HOH . F 6 HOH A 205 505 77 HOH HOH . F 6 HOH A 206 506 233 HOH HOH . F 6 HOH A 207 507 128 HOH HOH . F 6 HOH A 208 508 157 HOH HOH . F 6 HOH A 209 509 163 HOH HOH . F 6 HOH A 210 510 69 HOH HOH . F 6 HOH A 211 511 218 HOH HOH . F 6 HOH A 212 512 62 HOH HOH . F 6 HOH A 213 513 170 HOH HOH . F 6 HOH A 214 514 227 HOH HOH . F 6 HOH A 215 515 167 HOH HOH . F 6 HOH A 216 516 90 HOH HOH . F 6 HOH A 217 517 34 HOH HOH . F 6 HOH A 218 518 86 HOH HOH . F 6 HOH A 219 519 165 HOH HOH . F 6 HOH A 220 520 158 HOH HOH . F 6 HOH A 221 521 223 HOH HOH . F 6 HOH A 222 522 212 HOH HOH . F 6 HOH A 223 523 83 HOH HOH . F 6 HOH A 224 524 137 HOH HOH . F 6 HOH A 225 525 166 HOH HOH . F 6 HOH A 226 526 143 HOH HOH . F 6 HOH A 227 527 146 HOH HOH . F 6 HOH A 228 528 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 XQJ . A . E 5 -36.732 23.5 -15.138 0.6 19.35 ? C01 XQJ 204 A 1 HETATM 2 C C02 XQJ . A . E 5 -36.729 23.99 -13.691 0.6 18.41 ? C02 XQJ 204 A 1 HETATM 3 C C03 XQJ . A . E 5 -36.119 23.237 -12.702 0.6 19.08 ? C03 XQJ 204 A 1 HETATM 4 C C04 XQJ . A . E 5 -36.116 23.682 -11.388 0.6 18.49 ? C04 XQJ 204 A 1 HETATM 5 C C05 XQJ . A . E 5 -36.723 24.883 -11.065 0.6 16.29 ? C05 XQJ 204 A 1 HETATM 6 C C06 XQJ . A . E 5 -37.333 25.635 -12.053 0.6 14.79 ? C06 XQJ 204 A 1 HETATM 7 C C08 XQJ . A . E 5 -37.345 25.184 -13.363 0.6 16.35 ? C08 XQJ 204 A 1 HETATM 8 I I07 XQJ . A . E 5 -38.253 27.462 -11.55 0.6 14.17 ? I07 XQJ 204 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #