data_7L3M # _model_server_result.job_id u0l2YGV_yjA_52oGYoGMOQ _model_server_result.datetime_utc '2024-10-27 08:34:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l3m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":704}' # _entry.id 7L3M # _exptl.entry_id 7L3M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.421 _cell.angle_gamma 90 _cell.entry_id 7L3M _cell.length_a 44.389 _cell.length_b 118.935 _cell.length_c 60.3 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L3M _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 65 A GLU 63 1_555 H MN MN . A MN 707 2_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc2 A O LEU 81 A LEU 79 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc3 A O ASN 210 A ASN 208 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc4 A NZ LYS 246 A LYS 244 1_555 B MN MN . A MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc5 A NE2 HIS 266 A HIS 264 1_555 B MN MN . A MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc6 A OG1 THR 293 A THR 291 1_555 G MN MN . A MN 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc7 A OD1 ASP 313 A ASP 311 1_555 B MN MN . A MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc8 A NE2 HIS 504 A HIS 502 1_555 H MN MN . A MN 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc9 A OE1 GLU 609 A GLU 607 1_555 H MN MN . A MN 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc10 A OE2 GLU 609 A GLU 607 1_555 H MN MN . A MN 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc11 B MN MN . A MN 701 1_555 D O1P PEP . A PEP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc12 B MN MN . A MN 701 1_555 I O HOH . A HOH 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc13 C NA NA . A NA 702 1_555 I O HOH . A HOH 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc14 C NA NA . A NA 702 1_555 I O HOH . A HOH 934 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc15 D O3P PEP . A PEP 703 1_555 G MN MN . A MN 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc16 E O1B GDP . A GDP 704 1_555 G MN MN . A MN 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc17 G MN MN . A MN 706 1_555 I O HOH . A HOH 819 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc18 G MN MN . A MN 706 1_555 I O HOH . A HOH 836 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc19 G MN MN . A MN 706 1_555 I O HOH . A HOH 987 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 85 n n PB O2B GDP sing 86 n n PB O3B GDP sing 87 n n PB O3A GDP sing 88 n n O2B HOB2 GDP sing 89 n n O3B HOB3 GDP sing 90 n n O3A PA GDP sing 91 n n PA O1A GDP doub 92 n n PA O2A GDP sing 93 n n PA O5' GDP sing 94 n n O2A HOA2 GDP sing 95 n n O5' C5' GDP sing 96 n n C5' C4' GDP sing 97 n n C5' H5' GDP sing 98 n n C5' "H5''" GDP sing 99 n n C4' O4' GDP sing 100 n n C4' C3' GDP sing 101 n n C4' H4' GDP sing 102 n n O4' C1' GDP sing 103 n n C3' O3' GDP sing 104 n n C3' C2' GDP sing 105 n n C3' H3' GDP sing 106 n n O3' HO3' GDP sing 107 n n C2' O2' GDP sing 108 n n C2' C1' GDP sing 109 n n C2' H2' GDP sing 110 n n O2' HO2' GDP sing 111 n n C1' N9 GDP sing 112 n n C1' H1' GDP sing 113 n n N9 C8 GDP sing 114 n y N9 C4 GDP sing 115 n y C8 N7 GDP doub 116 n y C8 H8 GDP sing 117 n n N7 C5 GDP sing 118 n y C5 C6 GDP sing 119 n n C5 C4 GDP doub 120 n y C6 O6 GDP doub 121 n n C6 N1 GDP sing 122 n n N1 C2 GDP sing 123 n n N1 HN1 GDP sing 124 n n C2 N2 GDP sing 125 n n C2 N3 GDP doub 126 n n N2 HN21 GDP sing 127 n n N2 HN22 GDP sing 128 n n N3 C4 GDP sing 129 n n # _atom_sites.entry_id 7L3M _atom_sites.fract_transf_matrix[1][1] 0.022528 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007943 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008408 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 701 700 MN MN . C 3 NA A 1 702 702 NA NA . D 4 PEP A 1 703 801 PEP PEP . E 5 GDP A 1 704 901 GDP GDP . F 6 CO2 A 1 705 1001 CO2 CO2 . G 2 MN A 1 706 1 MN MN . H 2 MN A 1 707 2 MN MN . I 7 HOH A 1 801 229 HOH HOH . I 7 HOH A 2 802 296 HOH HOH . I 7 HOH A 3 803 342 HOH HOH . I 7 HOH A 4 804 201 HOH HOH . I 7 HOH A 5 805 341 HOH HOH . I 7 HOH A 6 806 216 HOH HOH . I 7 HOH A 7 807 111 HOH HOH . I 7 HOH A 8 808 29 HOH HOH . I 7 HOH A 9 809 220 HOH HOH . I 7 HOH A 10 810 326 HOH HOH . I 7 HOH A 11 811 309 HOH HOH . I 7 HOH A 12 812 134 HOH HOH . I 7 HOH A 13 813 328 HOH HOH . I 7 HOH A 14 814 143 HOH HOH . I 7 HOH A 15 815 108 HOH HOH . I 7 HOH A 16 816 48 HOH HOH . I 7 HOH A 17 817 332 HOH HOH . I 7 HOH A 18 818 68 HOH HOH . I 7 HOH A 19 819 138 HOH HOH . I 7 HOH A 20 820 285 HOH HOH . I 7 HOH A 21 821 71 HOH HOH . I 7 HOH A 22 822 298 HOH HOH . I 7 HOH A 23 823 189 HOH HOH . I 7 HOH A 24 824 267 HOH HOH . I 7 HOH A 25 825 157 HOH HOH . I 7 HOH A 26 826 277 HOH HOH . I 7 HOH A 27 827 44 HOH HOH . I 7 HOH A 28 828 49 HOH HOH . I 7 HOH A 29 829 6 HOH HOH . I 7 HOH A 30 830 129 HOH HOH . I 7 HOH A 31 831 126 HOH HOH . I 7 HOH A 32 832 2 HOH HOH . I 7 HOH A 33 833 265 HOH HOH . I 7 HOH A 34 834 122 HOH HOH . I 7 HOH A 35 835 244 HOH HOH . I 7 HOH A 36 836 139 HOH HOH . I 7 HOH A 37 837 83 HOH HOH . I 7 HOH A 38 838 283 HOH HOH . I 7 HOH A 39 839 174 HOH HOH . I 7 HOH A 40 840 176 HOH HOH . I 7 HOH A 41 841 106 HOH HOH . I 7 HOH A 42 842 187 HOH HOH . I 7 HOH A 43 843 162 HOH HOH . I 7 HOH A 44 844 145 HOH HOH . I 7 HOH A 45 845 275 HOH HOH . I 7 HOH A 46 846 346 HOH HOH . I 7 HOH A 47 847 249 HOH HOH . I 7 HOH A 48 848 21 HOH HOH . I 7 HOH A 49 849 246 HOH HOH . I 7 HOH A 50 850 10 HOH HOH . I 7 HOH A 51 851 36 HOH HOH . I 7 HOH A 52 852 191 HOH HOH . I 7 HOH A 53 853 180 HOH HOH . I 7 HOH A 54 854 15 HOH HOH . I 7 HOH A 55 855 79 HOH HOH . I 7 HOH A 56 856 125 HOH HOH . I 7 HOH A 57 857 75 HOH HOH . I 7 HOH A 58 858 231 HOH HOH . I 7 HOH A 59 859 22 HOH HOH . I 7 HOH A 60 860 9 HOH HOH . I 7 HOH A 61 861 270 HOH HOH . I 7 HOH A 62 862 256 HOH HOH . I 7 HOH A 63 863 293 HOH HOH . I 7 HOH A 64 864 18 HOH HOH . I 7 HOH A 65 865 81 HOH HOH . I 7 HOH A 66 866 204 HOH HOH . I 7 HOH A 67 867 19 HOH HOH . I 7 HOH A 68 868 273 HOH HOH . I 7 HOH A 69 869 58 HOH HOH . I 7 HOH A 70 870 150 HOH HOH . I 7 HOH A 71 871 118 HOH HOH . I 7 HOH A 72 872 25 HOH HOH . I 7 HOH A 73 873 100 HOH HOH . I 7 HOH A 74 874 77 HOH HOH . I 7 HOH A 75 875 252 HOH HOH . I 7 HOH A 76 876 218 HOH HOH . I 7 HOH A 77 877 331 HOH HOH . I 7 HOH A 78 878 288 HOH HOH . I 7 HOH A 79 879 110 HOH HOH . I 7 HOH A 80 880 181 HOH HOH . I 7 HOH A 81 881 206 HOH HOH . I 7 HOH A 82 882 212 HOH HOH . I 7 HOH A 83 883 289 HOH HOH . I 7 HOH A 84 884 215 HOH HOH . I 7 HOH A 85 885 225 HOH HOH . I 7 HOH A 86 886 123 HOH HOH . I 7 HOH A 87 887 76 HOH HOH . I 7 HOH A 88 888 182 HOH HOH . I 7 HOH A 89 889 141 HOH HOH . I 7 HOH A 90 890 11 HOH HOH . I 7 HOH A 91 891 233 HOH HOH . I 7 HOH A 92 892 103 HOH HOH . I 7 HOH A 93 893 20 HOH HOH . I 7 HOH A 94 894 142 HOH HOH . I 7 HOH A 95 895 279 HOH HOH . I 7 HOH A 96 896 130 HOH HOH . I 7 HOH A 97 897 8 HOH HOH . I 7 HOH A 98 898 278 HOH HOH . I 7 HOH A 99 899 56 HOH HOH . I 7 HOH A 100 900 66 HOH HOH . I 7 HOH A 101 901 102 HOH HOH . I 7 HOH A 102 902 23 HOH HOH . I 7 HOH A 103 903 156 HOH HOH . I 7 HOH A 104 904 27 HOH HOH . I 7 HOH A 105 905 209 HOH HOH . I 7 HOH A 106 906 87 HOH HOH . I 7 HOH A 107 907 287 HOH HOH . I 7 HOH A 108 908 294 HOH HOH . I 7 HOH A 109 909 7 HOH HOH . I 7 HOH A 110 910 230 HOH HOH . I 7 HOH A 111 911 155 HOH HOH . I 7 HOH A 112 912 344 HOH HOH . I 7 HOH A 113 913 47 HOH HOH . I 7 HOH A 114 914 17 HOH HOH . I 7 HOH A 115 915 236 HOH HOH . I 7 HOH A 116 916 54 HOH HOH . I 7 HOH A 117 917 24 HOH HOH . I 7 HOH A 118 918 228 HOH HOH . I 7 HOH A 119 919 195 HOH HOH . I 7 HOH A 120 920 350 HOH HOH . I 7 HOH A 121 921 50 HOH HOH . I 7 HOH A 122 922 4 HOH HOH . I 7 HOH A 123 923 12 HOH HOH . I 7 HOH A 124 924 219 HOH HOH . I 7 HOH A 125 925 104 HOH HOH . I 7 HOH A 126 926 147 HOH HOH . I 7 HOH A 127 927 136 HOH HOH . I 7 HOH A 128 928 28 HOH HOH . I 7 HOH A 129 929 343 HOH HOH . I 7 HOH A 130 930 43 HOH HOH . I 7 HOH A 131 931 124 HOH HOH . I 7 HOH A 132 932 152 HOH HOH . I 7 HOH A 133 933 30 HOH HOH . I 7 HOH A 134 934 227 HOH HOH . I 7 HOH A 135 935 140 HOH HOH . I 7 HOH A 136 936 318 HOH HOH . I 7 HOH A 137 937 80 HOH HOH . I 7 HOH A 138 938 205 HOH HOH . I 7 HOH A 139 939 261 HOH HOH . I 7 HOH A 140 940 336 HOH HOH . I 7 HOH A 141 941 53 HOH HOH . I 7 HOH A 142 942 196 HOH HOH . I 7 HOH A 143 943 1 HOH HOH . I 7 HOH A 144 944 107 HOH HOH . I 7 HOH A 145 945 214 HOH HOH . I 7 HOH A 146 946 310 HOH HOH . I 7 HOH A 147 947 223 HOH HOH . I 7 HOH A 148 948 259 HOH HOH . I 7 HOH A 149 949 116 HOH HOH . I 7 HOH A 150 950 16 HOH HOH . I 7 HOH A 151 951 72 HOH HOH . I 7 HOH A 152 952 193 HOH HOH . I 7 HOH A 153 953 113 HOH HOH . I 7 HOH A 154 954 163 HOH HOH . I 7 HOH A 155 955 257 HOH HOH . I 7 HOH A 156 956 57 HOH HOH . I 7 HOH A 157 957 347 HOH HOH . I 7 HOH A 158 958 226 HOH HOH . I 7 HOH A 159 959 237 HOH HOH . I 7 HOH A 160 960 253 HOH HOH . I 7 HOH A 161 961 211 HOH HOH . I 7 HOH A 162 962 160 HOH HOH . I 7 HOH A 163 963 210 HOH HOH . I 7 HOH A 164 964 266 HOH HOH . I 7 HOH A 165 965 177 HOH HOH . I 7 HOH A 166 966 55 HOH HOH . I 7 HOH A 167 967 63 HOH HOH . I 7 HOH A 168 968 115 HOH HOH . I 7 HOH A 169 969 52 HOH HOH . I 7 HOH A 170 970 94 HOH HOH . I 7 HOH A 171 971 14 HOH HOH . I 7 HOH A 172 972 241 HOH HOH . I 7 HOH A 173 973 92 HOH HOH . I 7 HOH A 174 974 3 HOH HOH . I 7 HOH A 175 975 105 HOH HOH . I 7 HOH A 176 976 84 HOH HOH . I 7 HOH A 177 977 221 HOH HOH . I 7 HOH A 178 978 5 HOH HOH . I 7 HOH A 179 979 312 HOH HOH . I 7 HOH A 180 980 13 HOH HOH . I 7 HOH A 181 981 235 HOH HOH . I 7 HOH A 182 982 154 HOH HOH . I 7 HOH A 183 983 325 HOH HOH . I 7 HOH A 184 984 352 HOH HOH . I 7 HOH A 185 985 135 HOH HOH . I 7 HOH A 186 986 282 HOH HOH . I 7 HOH A 187 987 137 HOH HOH . I 7 HOH A 188 988 208 HOH HOH . I 7 HOH A 189 989 353 HOH HOH . I 7 HOH A 190 990 51 HOH HOH . I 7 HOH A 191 991 247 HOH HOH . I 7 HOH A 192 992 26 HOH HOH . I 7 HOH A 193 993 149 HOH HOH . I 7 HOH A 194 994 148 HOH HOH . I 7 HOH A 195 995 65 HOH HOH . I 7 HOH A 196 996 316 HOH HOH . I 7 HOH A 197 997 301 HOH HOH . I 7 HOH A 198 998 133 HOH HOH . I 7 HOH A 199 999 313 HOH HOH . I 7 HOH A 200 1000 171 HOH HOH . I 7 HOH A 201 1001 207 HOH HOH . I 7 HOH A 202 1002 112 HOH HOH . I 7 HOH A 203 1003 172 HOH HOH . I 7 HOH A 204 1004 224 HOH HOH . I 7 HOH A 205 1005 132 HOH HOH . I 7 HOH A 206 1006 315 HOH HOH . I 7 HOH A 207 1007 323 HOH HOH . I 7 HOH A 208 1008 339 HOH HOH . I 7 HOH A 209 1009 291 HOH HOH . I 7 HOH A 210 1010 34 HOH HOH . I 7 HOH A 211 1011 78 HOH HOH . I 7 HOH A 212 1012 255 HOH HOH . I 7 HOH A 213 1013 262 HOH HOH . I 7 HOH A 214 1014 175 HOH HOH . I 7 HOH A 215 1015 276 HOH HOH . I 7 HOH A 216 1016 242 HOH HOH . I 7 HOH A 217 1017 299 HOH HOH . I 7 HOH A 218 1018 46 HOH HOH . I 7 HOH A 219 1019 258 HOH HOH . I 7 HOH A 220 1020 272 HOH HOH . I 7 HOH A 221 1021 324 HOH HOH . I 7 HOH A 222 1022 45 HOH HOH . I 7 HOH A 223 1023 127 HOH HOH . I 7 HOH A 224 1024 222 HOH HOH . I 7 HOH A 225 1025 297 HOH HOH . I 7 HOH A 226 1026 302 HOH HOH . I 7 HOH A 227 1027 101 HOH HOH . I 7 HOH A 228 1028 321 HOH HOH . I 7 HOH A 229 1029 158 HOH HOH . I 7 HOH A 230 1030 232 HOH HOH . I 7 HOH A 231 1031 354 HOH HOH . I 7 HOH A 232 1032 64 HOH HOH . I 7 HOH A 233 1033 170 HOH HOH . I 7 HOH A 234 1034 59 HOH HOH . I 7 HOH A 235 1035 240 HOH HOH . I 7 HOH A 236 1036 197 HOH HOH . I 7 HOH A 237 1037 319 HOH HOH . I 7 HOH A 238 1038 109 HOH HOH . I 7 HOH A 239 1039 243 HOH HOH . I 7 HOH A 240 1040 335 HOH HOH . I 7 HOH A 241 1041 307 HOH HOH . I 7 HOH A 242 1042 300 HOH HOH . I 7 HOH A 243 1043 333 HOH HOH . I 7 HOH A 244 1044 165 HOH HOH . I 7 HOH A 245 1045 131 HOH HOH . I 7 HOH A 246 1046 35 HOH HOH . I 7 HOH A 247 1047 70 HOH HOH . I 7 HOH A 248 1048 329 HOH HOH . I 7 HOH A 249 1049 144 HOH HOH . I 7 HOH A 250 1050 355 HOH HOH . I 7 HOH A 251 1051 345 HOH HOH . I 7 HOH A 252 1052 239 HOH HOH . I 7 HOH A 253 1053 250 HOH HOH . I 7 HOH A 254 1054 314 HOH HOH . I 7 HOH A 255 1055 151 HOH HOH . I 7 HOH A 256 1056 280 HOH HOH . I 7 HOH A 257 1057 183 HOH HOH . I 7 HOH A 258 1058 238 HOH HOH . I 7 HOH A 259 1059 349 HOH HOH . I 7 HOH A 260 1060 41 HOH HOH . I 7 HOH A 261 1061 186 HOH HOH . I 7 HOH A 262 1062 161 HOH HOH . I 7 HOH A 263 1063 166 HOH HOH . I 7 HOH A 264 1064 357 HOH HOH . I 7 HOH A 265 1065 308 HOH HOH . I 7 HOH A 266 1066 269 HOH HOH . I 7 HOH A 267 1067 192 HOH HOH . I 7 HOH A 268 1068 85 HOH HOH . I 7 HOH A 269 1069 164 HOH HOH . I 7 HOH A 270 1070 264 HOH HOH . I 7 HOH A 271 1071 271 HOH HOH . I 7 HOH A 272 1072 327 HOH HOH . I 7 HOH A 273 1073 290 HOH HOH . I 7 HOH A 274 1074 330 HOH HOH . I 7 HOH A 275 1075 114 HOH HOH . I 7 HOH A 276 1076 82 HOH HOH . I 7 HOH A 277 1077 263 HOH HOH . I 7 HOH A 278 1078 305 HOH HOH . I 7 HOH A 279 1079 99 HOH HOH . I 7 HOH A 280 1080 286 HOH HOH . I 7 HOH A 281 1081 311 HOH HOH . I 7 HOH A 282 1082 295 HOH HOH . I 7 HOH A 283 1083 91 HOH HOH . I 7 HOH A 284 1084 260 HOH HOH . I 7 HOH A 285 1085 31 HOH HOH . I 7 HOH A 286 1086 168 HOH HOH . I 7 HOH A 287 1087 322 HOH HOH . I 7 HOH A 288 1088 268 HOH HOH . I 7 HOH A 289 1089 159 HOH HOH . I 7 HOH A 290 1090 292 HOH HOH . I 7 HOH A 291 1091 179 HOH HOH . I 7 HOH A 292 1092 251 HOH HOH . I 7 HOH A 293 1093 39 HOH HOH . I 7 HOH A 294 1094 88 HOH HOH . I 7 HOH A 295 1095 254 HOH HOH . I 7 HOH A 296 1096 217 HOH HOH . I 7 HOH A 297 1097 178 HOH HOH . I 7 HOH A 298 1098 281 HOH HOH . I 7 HOH A 299 1099 245 HOH HOH . I 7 HOH A 300 1100 120 HOH HOH . I 7 HOH A 301 1101 61 HOH HOH . I 7 HOH A 302 1102 234 HOH HOH . I 7 HOH A 303 1103 274 HOH HOH . I 7 HOH A 304 1104 213 HOH HOH . I 7 HOH A 305 1105 317 HOH HOH . I 7 HOH A 306 1106 167 HOH HOH . I 7 HOH A 307 1107 334 HOH HOH . I 7 HOH A 308 1108 173 HOH HOH . I 7 HOH A 309 1109 117 HOH HOH . I 7 HOH A 310 1110 32 HOH HOH . I 7 HOH A 311 1111 356 HOH HOH . I 7 HOH A 312 1112 248 HOH HOH . I 7 HOH A 313 1113 351 HOH HOH . I 7 HOH A 314 1114 348 HOH HOH . I 7 HOH A 315 1115 320 HOH HOH . I 7 HOH A 316 1116 306 HOH HOH . I 7 HOH A 317 1117 96 HOH HOH . I 7 HOH A 318 1118 304 HOH HOH . I 7 HOH A 319 1119 303 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . E 5 -3.267 -1.191 16.267 1 25.24 ? PB GDP 704 A 1 HETATM 2 O O1B GDP . . . E 5 -4.558 -1.676 15.67 1 26.51 ? O1B GDP 704 A 1 HETATM 3 O O2B GDP . . . E 5 -2.098 -2.132 16.183 1 40.76 ? O2B GDP 704 A 1 HETATM 4 O O3B GDP . . . E 5 -3.008 0.289 16.033 1 28.55 ? O3B GDP 704 A 1 HETATM 5 O O3A GDP . . . E 5 -3.504 -1.297 17.86 1 34.01 ? O3A GDP 704 A 1 HETATM 6 P PA GDP . . . E 5 -4.272 -2.54 18.53 1 37.88 ? PA GDP 704 A 1 HETATM 7 O O1A GDP . . . E 5 -3.7 -3.785 17.884 1 32.85 ? O1A GDP 704 A 1 HETATM 8 O O2A GDP . . . E 5 -5.747 -2.243 18.58 1 29.66 ? O2A GDP 704 A 1 HETATM 9 O O5' GDP . . . E 5 -3.746 -2.417 20.036 1 25.35 ? O5' GDP 704 A 1 HETATM 10 C C5' GDP . . . E 5 -2.369 -2.669 20.279 1 31.84 ? C5' GDP 704 A 1 HETATM 11 C C4' GDP . . . E 5 -2.151 -2.704 21.779 1 27.29 ? C4' GDP 704 A 1 HETATM 12 O O4' GDP . . . E 5 -2.578 -1.47 22.356 1 24.91 ? O4' GDP 704 A 1 HETATM 13 C C3' GDP . . . E 5 -3.002 -3.812 22.366 1 22.42 ? C3' GDP 704 A 1 HETATM 14 O O3' GDP . . . E 5 -2.188 -4.662 23.165 1 31.5 ? O3' GDP 704 A 1 HETATM 15 C C2' GDP . . . E 5 -3.975 -3.119 23.278 1 29.64 ? C2' GDP 704 A 1 HETATM 16 O O2' GDP . . . E 5 -4.134 -3.909 24.459 1 35.59 ? O2' GDP 704 A 1 HETATM 17 C C1' GDP . . . E 5 -3.347 -1.747 23.517 1 25.82 ? C1' GDP 704 A 1 HETATM 18 N N9 GDP . . . E 5 -4.424 -0.743 23.649 1 18.91 ? N9 GDP 704 A 1 HETATM 19 C C8 GDP . . . E 5 -5.399 -0.511 22.736 1 19.45 ? C8 GDP 704 A 1 HETATM 20 N N7 GDP . . . E 5 -6.25 0.45 23.16 1 17.64 ? N7 GDP 704 A 1 HETATM 21 C C5 GDP . . . E 5 -5.814 0.826 24.381 1 17.89 ? C5 GDP 704 A 1 HETATM 22 C C6 GDP . . . E 5 -6.247 1.786 25.399 1 14.57 ? C6 GDP 704 A 1 HETATM 23 O O6 GDP . . . E 5 -7.258 2.476 25.165 1 14.39 ? O6 GDP 704 A 1 HETATM 24 N N1 GDP . . . E 5 -5.529 1.883 26.542 1 16.65 ? N1 GDP 704 A 1 HETATM 25 C C2 GDP . . . E 5 -4.44 1.113 26.777 1 17.57 ? C2 GDP 704 A 1 HETATM 26 N N2 GDP . . . E 5 -3.751 1.234 27.946 1 16.73 ? N2 GDP 704 A 1 HETATM 27 N N3 GDP . . . E 5 -3.989 0.208 25.875 1 18.24 ? N3 GDP 704 A 1 HETATM 28 C C4 GDP . . . E 5 -4.623 0.029 24.698 1 18.34 ? C4 GDP 704 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 394 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 28 #