data_7L4E # _model_server_result.job_id rDn42O5__SClrt7VxfyAog _model_server_result.datetime_utc '2024-11-30 07:45:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l4e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 7L4E # _exptl.entry_id 7L4E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7L4E _cell.length_a 86.95 _cell.length_b 86.95 _cell.length_c 114.48 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -57.24 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 164 A CYS 163 1_555 E C3 MU4 . B MU4 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? covale ? covale2 B OG SER 37 B SER 36 1_555 E P24 MU4 . B MU4 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.608 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7L4E _atom_sites.fract_transf_matrix[1][1] 0.011501 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008735 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 501 501 EDO EDO . D 3 EDO A 1 502 601 EDO EDO . E 4 MU4 B 1 101 1 MU4 PNS . F 5 HOH A 1 601 248 HOH HOH . F 5 HOH A 2 602 278 HOH HOH . F 5 HOH A 3 603 87 HOH HOH . F 5 HOH A 4 604 207 HOH HOH . F 5 HOH A 5 605 145 HOH HOH . F 5 HOH A 6 606 88 HOH HOH . F 5 HOH A 7 607 158 HOH HOH . F 5 HOH A 8 608 1 HOH HOH . F 5 HOH A 9 609 59 HOH HOH . F 5 HOH A 10 610 135 HOH HOH . F 5 HOH A 11 611 154 HOH HOH . F 5 HOH A 12 612 90 HOH HOH . F 5 HOH A 13 613 241 HOH HOH . F 5 HOH A 14 614 180 HOH HOH . F 5 HOH A 15 615 282 HOH HOH . F 5 HOH A 16 616 54 HOH HOH . F 5 HOH A 17 617 215 HOH HOH . F 5 HOH A 18 618 74 HOH HOH . F 5 HOH A 19 619 151 HOH HOH . F 5 HOH A 20 620 116 HOH HOH . F 5 HOH A 21 621 213 HOH HOH . F 5 HOH A 22 622 56 HOH HOH . F 5 HOH A 23 623 133 HOH HOH . F 5 HOH A 24 624 94 HOH HOH . F 5 HOH A 25 625 49 HOH HOH . F 5 HOH A 26 626 272 HOH HOH . F 5 HOH A 27 627 78 HOH HOH . F 5 HOH A 28 628 75 HOH HOH . F 5 HOH A 29 629 24 HOH HOH . F 5 HOH A 30 630 72 HOH HOH . F 5 HOH A 31 631 41 HOH HOH . F 5 HOH A 32 632 138 HOH HOH . F 5 HOH A 33 633 149 HOH HOH . F 5 HOH A 34 634 208 HOH HOH . F 5 HOH A 35 635 6 HOH HOH . F 5 HOH A 36 636 16 HOH HOH . F 5 HOH A 37 637 10 HOH HOH . F 5 HOH A 38 638 46 HOH HOH . F 5 HOH A 39 639 36 HOH HOH . F 5 HOH A 40 640 134 HOH HOH . F 5 HOH A 41 641 104 HOH HOH . F 5 HOH A 42 642 14 HOH HOH . F 5 HOH A 43 643 60 HOH HOH . F 5 HOH A 44 644 202 HOH HOH . F 5 HOH A 45 645 34 HOH HOH . F 5 HOH A 46 646 4 HOH HOH . F 5 HOH A 47 647 3 HOH HOH . F 5 HOH A 48 648 118 HOH HOH . F 5 HOH A 49 649 35 HOH HOH . F 5 HOH A 50 650 50 HOH HOH . F 5 HOH A 51 651 166 HOH HOH . F 5 HOH A 52 652 17 HOH HOH . F 5 HOH A 53 653 73 HOH HOH . F 5 HOH A 54 654 2 HOH HOH . F 5 HOH A 55 655 29 HOH HOH . F 5 HOH A 56 656 77 HOH HOH . F 5 HOH A 57 657 40 HOH HOH . F 5 HOH A 58 658 69 HOH HOH . F 5 HOH A 59 659 83 HOH HOH . F 5 HOH A 60 660 63 HOH HOH . F 5 HOH A 61 661 157 HOH HOH . F 5 HOH A 62 662 18 HOH HOH . F 5 HOH A 63 663 221 HOH HOH . F 5 HOH A 64 664 58 HOH HOH . F 5 HOH A 65 665 15 HOH HOH . F 5 HOH A 66 666 7 HOH HOH . F 5 HOH A 67 667 120 HOH HOH . F 5 HOH A 68 668 240 HOH HOH . F 5 HOH A 69 669 70 HOH HOH . F 5 HOH A 70 670 52 HOH HOH . F 5 HOH A 71 671 198 HOH HOH . F 5 HOH A 72 672 67 HOH HOH . F 5 HOH A 73 673 204 HOH HOH . F 5 HOH A 74 674 37 HOH HOH . F 5 HOH A 75 675 170 HOH HOH . F 5 HOH A 76 676 261 HOH HOH . F 5 HOH A 77 677 71 HOH HOH . F 5 HOH A 78 678 51 HOH HOH . F 5 HOH A 79 679 86 HOH HOH . F 5 HOH A 80 680 115 HOH HOH . F 5 HOH A 81 681 182 HOH HOH . F 5 HOH A 82 682 42 HOH HOH . F 5 HOH A 83 683 159 HOH HOH . F 5 HOH A 84 684 89 HOH HOH . F 5 HOH A 85 685 110 HOH HOH . F 5 HOH A 86 686 12 HOH HOH . F 5 HOH A 87 687 123 HOH HOH . F 5 HOH A 88 688 211 HOH HOH . F 5 HOH A 89 689 22 HOH HOH . F 5 HOH A 90 690 155 HOH HOH . F 5 HOH A 91 691 31 HOH HOH . F 5 HOH A 92 692 66 HOH HOH . F 5 HOH A 93 693 81 HOH HOH . F 5 HOH A 94 694 96 HOH HOH . F 5 HOH A 95 695 39 HOH HOH . F 5 HOH A 96 696 106 HOH HOH . F 5 HOH A 97 697 85 HOH HOH . F 5 HOH A 98 698 30 HOH HOH . F 5 HOH A 99 699 25 HOH HOH . F 5 HOH A 100 700 124 HOH HOH . F 5 HOH A 101 701 209 HOH HOH . F 5 HOH A 102 702 19 HOH HOH . F 5 HOH A 103 703 64 HOH HOH . F 5 HOH A 104 704 102 HOH HOH . F 5 HOH A 105 705 220 HOH HOH . F 5 HOH A 106 706 191 HOH HOH . F 5 HOH A 107 707 253 HOH HOH . F 5 HOH A 108 708 117 HOH HOH . F 5 HOH A 109 709 62 HOH HOH . F 5 HOH A 110 710 21 HOH HOH . F 5 HOH A 111 711 43 HOH HOH . F 5 HOH A 112 712 260 HOH HOH . F 5 HOH A 113 713 165 HOH HOH . F 5 HOH A 114 714 9 HOH HOH . F 5 HOH A 115 715 130 HOH HOH . F 5 HOH A 116 716 45 HOH HOH . F 5 HOH A 117 717 136 HOH HOH . F 5 HOH A 118 718 11 HOH HOH . F 5 HOH A 119 719 177 HOH HOH . F 5 HOH A 120 720 61 HOH HOH . F 5 HOH A 121 721 82 HOH HOH . F 5 HOH A 122 722 143 HOH HOH . F 5 HOH A 123 723 48 HOH HOH . F 5 HOH A 124 724 217 HOH HOH . F 5 HOH A 125 725 210 HOH HOH . F 5 HOH A 126 726 26 HOH HOH . F 5 HOH A 127 727 175 HOH HOH . F 5 HOH A 128 728 131 HOH HOH . F 5 HOH A 129 729 126 HOH HOH . F 5 HOH A 130 730 257 HOH HOH . F 5 HOH A 131 731 32 HOH HOH . F 5 HOH A 132 732 277 HOH HOH . F 5 HOH A 133 733 68 HOH HOH . F 5 HOH A 134 734 105 HOH HOH . F 5 HOH A 135 735 8 HOH HOH . F 5 HOH A 136 736 127 HOH HOH . F 5 HOH A 137 737 189 HOH HOH . F 5 HOH A 138 738 125 HOH HOH . F 5 HOH A 139 739 237 HOH HOH . F 5 HOH A 140 740 55 HOH HOH . F 5 HOH A 141 741 150 HOH HOH . F 5 HOH A 142 742 108 HOH HOH . F 5 HOH A 143 743 153 HOH HOH . F 5 HOH A 144 744 243 HOH HOH . F 5 HOH A 145 745 152 HOH HOH . F 5 HOH A 146 746 146 HOH HOH . F 5 HOH A 147 747 5 HOH HOH . F 5 HOH A 148 748 142 HOH HOH . F 5 HOH A 149 749 80 HOH HOH . F 5 HOH A 150 750 163 HOH HOH . F 5 HOH A 151 751 258 HOH HOH . F 5 HOH A 152 752 92 HOH HOH . F 5 HOH A 153 753 76 HOH HOH . F 5 HOH A 154 754 44 HOH HOH . F 5 HOH A 155 755 129 HOH HOH . F 5 HOH A 156 756 281 HOH HOH . F 5 HOH A 157 757 97 HOH HOH . F 5 HOH A 158 758 273 HOH HOH . F 5 HOH A 159 759 140 HOH HOH . F 5 HOH A 160 760 112 HOH HOH . F 5 HOH A 161 761 103 HOH HOH . F 5 HOH A 162 762 28 HOH HOH . F 5 HOH A 163 763 98 HOH HOH . F 5 HOH A 164 764 111 HOH HOH . F 5 HOH A 165 765 214 HOH HOH . F 5 HOH A 166 766 27 HOH HOH . F 5 HOH A 167 767 38 HOH HOH . F 5 HOH A 168 768 206 HOH HOH . F 5 HOH A 169 769 93 HOH HOH . F 5 HOH A 170 770 162 HOH HOH . F 5 HOH A 171 771 188 HOH HOH . F 5 HOH A 172 772 57 HOH HOH . F 5 HOH A 173 773 84 HOH HOH . F 5 HOH A 174 774 121 HOH HOH . F 5 HOH A 175 775 148 HOH HOH . F 5 HOH A 176 776 203 HOH HOH . F 5 HOH A 177 777 239 HOH HOH . F 5 HOH A 178 778 147 HOH HOH . F 5 HOH A 179 779 173 HOH HOH . F 5 HOH A 180 780 79 HOH HOH . F 5 HOH A 181 781 280 HOH HOH . F 5 HOH A 182 782 242 HOH HOH . F 5 HOH A 183 783 122 HOH HOH . F 5 HOH A 184 784 20 HOH HOH . F 5 HOH A 185 785 168 HOH HOH . F 5 HOH A 186 786 236 HOH HOH . F 5 HOH A 187 787 216 HOH HOH . F 5 HOH A 188 788 193 HOH HOH . F 5 HOH A 189 789 113 HOH HOH . F 5 HOH A 190 790 265 HOH HOH . F 5 HOH A 191 791 228 HOH HOH . F 5 HOH A 192 792 33 HOH HOH . F 5 HOH A 193 793 186 HOH HOH . F 5 HOH A 194 794 212 HOH HOH . F 5 HOH A 195 795 249 HOH HOH . F 5 HOH A 196 796 230 HOH HOH . F 5 HOH A 197 797 190 HOH HOH . F 5 HOH A 198 798 218 HOH HOH . F 5 HOH A 199 799 219 HOH HOH . F 5 HOH A 200 800 171 HOH HOH . F 5 HOH A 201 801 276 HOH HOH . F 5 HOH A 202 802 196 HOH HOH . F 5 HOH A 203 803 128 HOH HOH . F 5 HOH A 204 804 266 HOH HOH . F 5 HOH A 205 805 274 HOH HOH . F 5 HOH A 206 806 254 HOH HOH . F 5 HOH A 207 807 197 HOH HOH . F 5 HOH A 208 808 263 HOH HOH . F 5 HOH A 209 809 224 HOH HOH . F 5 HOH A 210 810 119 HOH HOH . F 5 HOH A 211 811 262 HOH HOH . F 5 HOH A 212 812 252 HOH HOH . F 5 HOH A 213 813 181 HOH HOH . F 5 HOH A 214 814 229 HOH HOH . F 5 HOH A 215 815 271 HOH HOH . F 5 HOH A 216 816 114 HOH HOH . F 5 HOH A 217 817 255 HOH HOH . F 5 HOH A 218 818 65 HOH HOH . F 5 HOH A 219 819 275 HOH HOH . F 5 HOH A 220 820 244 HOH HOH . F 5 HOH A 221 821 226 HOH HOH . F 5 HOH A 222 822 101 HOH HOH . F 5 HOH A 223 823 251 HOH HOH . F 5 HOH A 224 824 13 HOH HOH . F 5 HOH A 225 825 232 HOH HOH . F 5 HOH A 226 826 100 HOH HOH . F 5 HOH A 227 827 256 HOH HOH . F 5 HOH A 228 828 269 HOH HOH . F 5 HOH A 229 829 283 HOH HOH . F 5 HOH A 230 830 91 HOH HOH . F 5 HOH A 231 831 194 HOH HOH . F 5 HOH A 232 832 99 HOH HOH . F 5 HOH A 233 833 137 HOH HOH . F 5 HOH A 234 834 238 HOH HOH . F 5 HOH A 235 835 172 HOH HOH . F 5 HOH A 236 836 164 HOH HOH . F 5 HOH A 237 837 23 HOH HOH . F 5 HOH A 238 838 141 HOH HOH . F 5 HOH A 239 839 223 HOH HOH . F 5 HOH A 240 840 169 HOH HOH . F 5 HOH A 241 841 246 HOH HOH . F 5 HOH A 242 842 284 HOH HOH . F 5 HOH A 243 843 178 HOH HOH . F 5 HOH A 244 844 233 HOH HOH . F 5 HOH A 245 845 161 HOH HOH . F 5 HOH A 246 846 184 HOH HOH . F 5 HOH A 247 847 144 HOH HOH . F 5 HOH A 248 848 268 HOH HOH . F 5 HOH A 249 849 264 HOH HOH . F 5 HOH A 250 850 174 HOH HOH . F 5 HOH A 251 851 179 HOH HOH . F 5 HOH A 252 852 267 HOH HOH . F 5 HOH A 253 853 250 HOH HOH . F 5 HOH A 254 854 195 HOH HOH . F 5 HOH A 255 855 139 HOH HOH . F 5 HOH A 256 856 160 HOH HOH . F 5 HOH A 257 857 270 HOH HOH . G 5 HOH B 1 201 259 HOH HOH . G 5 HOH B 2 202 95 HOH HOH . G 5 HOH B 3 203 234 HOH HOH . G 5 HOH B 4 204 245 HOH HOH . G 5 HOH B 5 205 231 HOH HOH . G 5 HOH B 6 206 201 HOH HOH . G 5 HOH B 7 207 222 HOH HOH . G 5 HOH B 8 208 235 HOH HOH . G 5 HOH B 9 209 183 HOH HOH . G 5 HOH B 10 210 53 HOH HOH . G 5 HOH B 11 211 205 HOH HOH . G 5 HOH B 12 212 187 HOH HOH . G 5 HOH B 13 213 47 HOH HOH . G 5 HOH B 14 214 107 HOH HOH . G 5 HOH B 15 215 279 HOH HOH . G 5 HOH B 16 216 192 HOH HOH . G 5 HOH B 17 217 167 HOH HOH . G 5 HOH B 18 218 199 HOH HOH . G 5 HOH B 19 219 156 HOH HOH . G 5 HOH B 20 220 227 HOH HOH . G 5 HOH B 21 221 225 HOH HOH . G 5 HOH B 22 222 132 HOH HOH . G 5 HOH B 23 223 185 HOH HOH . G 5 HOH B 24 224 247 HOH HOH . G 5 HOH B 25 225 109 HOH HOH . G 5 HOH B 26 226 176 HOH HOH . G 5 HOH B 27 227 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 -13.591 2.814 -12.799 1 67.25 ? C1 EDO 502 A 1 HETATM 2 O O1 EDO . . . D 3 -13.023 3.908 -13.53 1 61.8 ? O1 EDO 502 A 1 HETATM 3 C C2 EDO . . . D 3 -12.581 2.291 -11.786 1 70.52 ? C2 EDO 502 A 1 HETATM 4 O O2 EDO . . . D 3 -13.146 1.183 -11.075 1 69.02 ? O2 EDO 502 A 1 # _model_server_stats.io_time_ms 90 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 447 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #