data_7L4J # _model_server_result.job_id 0xcBEfmZ68csiEm9wybnuQ _model_server_result.datetime_utc '2025-07-31 04:41:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7l4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 7L4J # _exptl.entry_id 7L4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7L4J _cell.length_a 70.688 _cell.length_b 101.105 _cell.length_c 148.974 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7L4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 123 A ASP 151 1_555 C MG MG . A MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc2 A OD1 ASP 123 A ASP 151 1_555 D MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc3 A O GLY 124 A GLY 152 1_555 D MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc4 A OD1 ASP 374 A ASP 437 1_555 C MG MG . A MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc5 A OD2 ASP 435 A ASP 498 1_555 C MG MG . A MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? metalc ? metalc6 C MG MG . A MG 600 1_555 G O HOH . A HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc7 C MG MG . A MG 600 1_555 G O HOH . A HOH 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc8 C MG MG . A MG 600 1_555 G O HOH . A HOH 731 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc9 D MG MG . A MG 601 1_555 G O HOH . A HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc10 D MG MG . A MG 601 1_555 G O HOH . A HOH 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc11 D MG MG . A MG 601 1_555 G O HOH . A HOH 721 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc12 D MG MG . A MG 601 1_555 G O HOH . A HOH 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc13 B OD1 ASP 123 B ASP 151 1_555 E MG MG . B MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.844 ? metalc ? metalc14 B OD2 ASP 123 B ASP 151 1_555 F MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc15 B O GLY 124 B GLY 152 1_555 E MG MG . B MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc16 B OD1 ASP 374 B ASP 437 1_555 F MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc17 B OD2 ASP 435 B ASP 498 1_555 F MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc18 E MG MG . B MG 600 1_555 H O HOH . B HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc19 E MG MG . B MG 600 1_555 H O HOH . B HOH 728 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc20 E MG MG . B MG 600 1_555 H O HOH . B HOH 734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc21 E MG MG . B MG 600 1_555 H O HOH . B HOH 741 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc22 F MG MG . B MG 601 1_555 H O HOH . B HOH 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc23 F MG MG . B MG 601 1_555 H O HOH . B HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc24 F MG MG . B MG 601 1_555 H O HOH . B HOH 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7L4J _atom_sites.fract_transf_matrix[1][1] 0.014147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009891 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006713 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 600 600 MG MG . D 2 MG A 1 601 601 MG MG . E 2 MG B 1 600 600 MG MG . F 2 MG B 1 601 601 MG MG . G 3 HOH A 1 701 49 HOH HOH . G 3 HOH A 2 702 40 HOH HOH . G 3 HOH A 3 703 4 HOH HOH . G 3 HOH A 4 704 21 HOH HOH . G 3 HOH A 5 705 96 HOH HOH . G 3 HOH A 6 706 52 HOH HOH . G 3 HOH A 7 707 117 HOH HOH . G 3 HOH A 8 708 12 HOH HOH . G 3 HOH A 9 709 66 HOH HOH . G 3 HOH A 10 710 53 HOH HOH . G 3 HOH A 11 711 124 HOH HOH . G 3 HOH A 12 712 1 HOH HOH . G 3 HOH A 13 713 123 HOH HOH . G 3 HOH A 14 714 80 HOH HOH . G 3 HOH A 15 715 107 HOH HOH . G 3 HOH A 16 716 3 HOH HOH . G 3 HOH A 17 717 42 HOH HOH . G 3 HOH A 18 718 56 HOH HOH . G 3 HOH A 19 719 125 HOH HOH . G 3 HOH A 20 720 81 HOH HOH . G 3 HOH A 21 721 119 HOH HOH . G 3 HOH A 22 722 94 HOH HOH . G 3 HOH A 23 723 77 HOH HOH . G 3 HOH A 24 724 86 HOH HOH . G 3 HOH A 25 725 13 HOH HOH . G 3 HOH A 26 726 6 HOH HOH . G 3 HOH A 27 727 22 HOH HOH . G 3 HOH A 28 728 8 HOH HOH . G 3 HOH A 29 729 93 HOH HOH . G 3 HOH A 30 730 48 HOH HOH . G 3 HOH A 31 731 120 HOH HOH . G 3 HOH A 32 732 99 HOH HOH . G 3 HOH A 33 733 72 HOH HOH . G 3 HOH A 34 734 58 HOH HOH . G 3 HOH A 35 735 39 HOH HOH . G 3 HOH A 36 736 121 HOH HOH . G 3 HOH A 37 737 51 HOH HOH . G 3 HOH A 38 738 20 HOH HOH . G 3 HOH A 39 739 85 HOH HOH . G 3 HOH A 40 740 79 HOH HOH . G 3 HOH A 41 741 33 HOH HOH . G 3 HOH A 42 742 101 HOH HOH . G 3 HOH A 43 743 10 HOH HOH . G 3 HOH A 44 744 118 HOH HOH . G 3 HOH A 45 745 68 HOH HOH . G 3 HOH A 46 746 87 HOH HOH . G 3 HOH A 47 747 106 HOH HOH . G 3 HOH A 48 748 83 HOH HOH . G 3 HOH A 49 749 55 HOH HOH . G 3 HOH A 50 750 35 HOH HOH . G 3 HOH A 51 751 109 HOH HOH . G 3 HOH A 52 752 103 HOH HOH . G 3 HOH A 53 753 76 HOH HOH . G 3 HOH A 54 754 70 HOH HOH . G 3 HOH A 55 755 84 HOH HOH . G 3 HOH A 56 756 112 HOH HOH . G 3 HOH A 57 757 26 HOH HOH . G 3 HOH A 58 758 73 HOH HOH . H 3 HOH B 1 701 97 HOH HOH . H 3 HOH B 2 702 14 HOH HOH . H 3 HOH B 3 703 23 HOH HOH . H 3 HOH B 4 704 89 HOH HOH . H 3 HOH B 5 705 18 HOH HOH . H 3 HOH B 6 706 15 HOH HOH . H 3 HOH B 7 707 92 HOH HOH . H 3 HOH B 8 708 114 HOH HOH . H 3 HOH B 9 709 131 HOH HOH . H 3 HOH B 10 710 127 HOH HOH . H 3 HOH B 11 711 75 HOH HOH . H 3 HOH B 12 712 132 HOH HOH . H 3 HOH B 13 713 62 HOH HOH . H 3 HOH B 14 714 31 HOH HOH . H 3 HOH B 15 715 135 HOH HOH . H 3 HOH B 16 716 24 HOH HOH . H 3 HOH B 17 717 100 HOH HOH . H 3 HOH B 18 718 115 HOH HOH . H 3 HOH B 19 719 32 HOH HOH . H 3 HOH B 20 720 54 HOH HOH . H 3 HOH B 21 721 126 HOH HOH . H 3 HOH B 22 722 105 HOH HOH . H 3 HOH B 23 723 90 HOH HOH . H 3 HOH B 24 724 60 HOH HOH . H 3 HOH B 25 725 38 HOH HOH . H 3 HOH B 26 726 2 HOH HOH . H 3 HOH B 27 727 134 HOH HOH . H 3 HOH B 28 728 37 HOH HOH . H 3 HOH B 29 729 46 HOH HOH . H 3 HOH B 30 730 129 HOH HOH . H 3 HOH B 31 731 122 HOH HOH . H 3 HOH B 32 732 82 HOH HOH . H 3 HOH B 33 733 19 HOH HOH . H 3 HOH B 34 734 116 HOH HOH . H 3 HOH B 35 735 133 HOH HOH . H 3 HOH B 36 736 95 HOH HOH . H 3 HOH B 37 737 67 HOH HOH . H 3 HOH B 38 738 36 HOH HOH . H 3 HOH B 39 739 34 HOH HOH . H 3 HOH B 40 740 59 HOH HOH . H 3 HOH B 41 741 130 HOH HOH . H 3 HOH B 42 742 57 HOH HOH . H 3 HOH B 43 743 47 HOH HOH . H 3 HOH B 44 744 104 HOH HOH . H 3 HOH B 45 745 88 HOH HOH . H 3 HOH B 46 746 25 HOH HOH . H 3 HOH B 47 747 71 HOH HOH . H 3 HOH B 48 748 108 HOH HOH . H 3 HOH B 49 749 98 HOH HOH . H 3 HOH B 50 750 43 HOH HOH . H 3 HOH B 51 751 41 HOH HOH . H 3 HOH B 52 752 69 HOH HOH . H 3 HOH B 53 753 113 HOH HOH . H 3 HOH B 54 754 128 HOH HOH . H 3 HOH B 55 755 63 HOH HOH . H 3 HOH B 56 756 50 HOH HOH . H 3 HOH B 57 757 111 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -8.175 _atom_site.Cartn_y 3.411 _atom_site.Cartn_z -44.777 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #